data_9BHY # _model_server_result.job_id yQGy9rO3AOGRmdnRg_lwKQ _model_server_result.datetime_utc '2024-11-28 16:04:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9bhy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 9BHY # _exptl.entry_id 9BHY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 85.04 _cell.angle_beta 69.89 _cell.angle_gamma 70.29 _cell.entry_id 9BHY _cell.length_a 56.41 _cell.length_b 74.478 _cell.length_c 75.493 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9BHY _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 100 n n C1 C2 EDO sing 101 n n C1 H11 EDO sing 102 n n C1 H12 EDO sing 103 n n O1 HO1 EDO sing 104 n n C2 O2 EDO sing 105 n n C2 H21 EDO sing 106 n n C2 H22 EDO sing 107 n n O2 HO2 EDO sing 108 n n # _atom_sites.entry_id 9BHY _atom_sites.fract_transf_matrix[1][1] 0.017727 _atom_sites.fract_transf_matrix[1][2] -0.006351 _atom_sites.fract_transf_matrix[1][3] -0.006706 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014262 _atom_sites.fract_transf_matrix[2][3] 0.000476 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014114 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DBH A 1 601 540 DBH DBH . D 3 EDO A 1 602 542 EDO EDO . E 2 DBH B 1 601 540 DBH DBH . F 3 EDO B 1 602 541 EDO EDO . G 4 HOH A 1 701 116 HOH HOH . G 4 HOH A 2 702 104 HOH HOH . G 4 HOH A 3 703 183 HOH HOH . G 4 HOH A 4 704 94 HOH HOH . G 4 HOH A 5 705 175 HOH HOH . G 4 HOH A 6 706 53 HOH HOH . G 4 HOH A 7 707 173 HOH HOH . G 4 HOH A 8 708 135 HOH HOH . G 4 HOH A 9 709 115 HOH HOH . G 4 HOH A 10 710 30 HOH HOH . G 4 HOH A 11 711 261 HOH HOH . G 4 HOH A 12 712 185 HOH HOH . G 4 HOH A 13 713 40 HOH HOH . G 4 HOH A 14 714 140 HOH HOH . G 4 HOH A 15 715 15 HOH HOH . G 4 HOH A 16 716 81 HOH HOH . G 4 HOH A 17 717 114 HOH HOH . G 4 HOH A 18 718 223 HOH HOH . G 4 HOH A 19 719 136 HOH HOH . G 4 HOH A 20 720 44 HOH HOH . G 4 HOH A 21 721 84 HOH HOH . G 4 HOH A 22 722 181 HOH HOH . G 4 HOH A 23 723 31 HOH HOH . G 4 HOH A 24 724 87 HOH HOH . G 4 HOH A 25 725 123 HOH HOH . G 4 HOH A 26 726 131 HOH HOH . G 4 HOH A 27 727 6 HOH HOH . G 4 HOH A 28 728 21 HOH HOH . G 4 HOH A 29 729 256 HOH HOH . G 4 HOH A 30 730 117 HOH HOH . G 4 HOH A 31 731 258 HOH HOH . G 4 HOH A 32 732 157 HOH HOH . G 4 HOH A 33 733 45 HOH HOH . G 4 HOH A 34 734 48 HOH HOH . G 4 HOH A 35 735 184 HOH HOH . G 4 HOH A 36 736 237 HOH HOH . G 4 HOH A 37 737 107 HOH HOH . G 4 HOH A 38 738 120 HOH HOH . G 4 HOH A 39 739 134 HOH HOH . G 4 HOH A 40 740 96 HOH HOH . G 4 HOH A 41 741 12 HOH HOH . G 4 HOH A 42 742 224 HOH HOH . G 4 HOH A 43 743 67 HOH HOH . G 4 HOH A 44 744 47 HOH HOH . G 4 HOH A 45 745 230 HOH HOH . G 4 HOH A 46 746 32 HOH HOH . G 4 HOH A 47 747 73 HOH HOH . G 4 HOH A 48 748 38 HOH HOH . G 4 HOH A 49 749 75 HOH HOH . G 4 HOH A 50 750 255 HOH HOH . G 4 HOH A 51 751 76 HOH HOH . G 4 HOH A 52 752 113 HOH HOH . G 4 HOH A 53 753 8 HOH HOH . G 4 HOH A 54 754 74 HOH HOH . G 4 HOH A 55 755 248 HOH HOH . G 4 HOH A 56 756 60 HOH HOH . G 4 HOH A 57 757 197 HOH HOH . G 4 HOH A 58 758 85 HOH HOH . G 4 HOH A 59 759 182 HOH HOH . G 4 HOH A 60 760 132 HOH HOH . G 4 HOH A 61 761 43 HOH HOH . G 4 HOH A 62 762 7 HOH HOH . G 4 HOH A 63 763 198 HOH HOH . G 4 HOH A 64 764 88 HOH HOH . G 4 HOH A 65 765 245 HOH HOH . G 4 HOH A 66 766 227 HOH HOH . G 4 HOH A 67 767 46 HOH HOH . G 4 HOH A 68 768 4 HOH HOH . G 4 HOH A 69 769 240 HOH HOH . G 4 HOH A 70 770 13 HOH HOH . G 4 HOH A 71 771 254 HOH HOH . G 4 HOH A 72 772 239 HOH HOH . G 4 HOH A 73 773 247 HOH HOH . G 4 HOH A 74 774 225 HOH HOH . G 4 HOH A 75 775 100 HOH HOH . G 4 HOH A 76 776 10 HOH HOH . G 4 HOH A 77 777 79 HOH HOH . G 4 HOH A 78 778 252 HOH HOH . G 4 HOH A 79 779 83 HOH HOH . G 4 HOH A 80 780 138 HOH HOH . G 4 HOH A 81 781 251 HOH HOH . G 4 HOH A 82 782 33 HOH HOH . G 4 HOH A 83 783 221 HOH HOH . G 4 HOH A 84 784 29 HOH HOH . G 4 HOH A 85 785 16 HOH HOH . G 4 HOH A 86 786 41 HOH HOH . G 4 HOH A 87 787 257 HOH HOH . G 4 HOH A 88 788 66 HOH HOH . G 4 HOH A 89 789 253 HOH HOH . G 4 HOH A 90 790 171 HOH HOH . G 4 HOH A 91 791 54 HOH HOH . G 4 HOH A 92 792 71 HOH HOH . G 4 HOH A 93 793 199 HOH HOH . G 4 HOH A 94 794 158 HOH HOH . G 4 HOH A 95 795 122 HOH HOH . G 4 HOH A 96 796 219 HOH HOH . G 4 HOH A 97 797 262 HOH HOH . G 4 HOH A 98 798 36 HOH HOH . G 4 HOH A 99 799 152 HOH HOH . G 4 HOH A 100 800 201 HOH HOH . G 4 HOH A 101 801 234 HOH HOH . H 4 HOH B 1 701 69 HOH HOH . H 4 HOH B 2 702 250 HOH HOH . H 4 HOH B 3 703 188 HOH HOH . H 4 HOH B 4 704 99 HOH HOH . H 4 HOH B 5 705 98 HOH HOH . H 4 HOH B 6 706 124 HOH HOH . H 4 HOH B 7 707 93 HOH HOH . H 4 HOH B 8 708 166 HOH HOH . H 4 HOH B 9 709 11 HOH HOH . H 4 HOH B 10 710 77 HOH HOH . H 4 HOH B 11 711 70 HOH HOH . H 4 HOH B 12 712 260 HOH HOH . H 4 HOH B 13 713 243 HOH HOH . H 4 HOH B 14 714 205 HOH HOH . H 4 HOH B 15 715 102 HOH HOH . H 4 HOH B 16 716 212 HOH HOH . H 4 HOH B 17 717 86 HOH HOH . H 4 HOH B 18 718 193 HOH HOH . H 4 HOH B 19 719 207 HOH HOH . H 4 HOH B 20 720 178 HOH HOH . H 4 HOH B 21 721 19 HOH HOH . H 4 HOH B 22 722 14 HOH HOH . H 4 HOH B 23 723 9 HOH HOH . H 4 HOH B 24 724 232 HOH HOH . H 4 HOH B 25 725 23 HOH HOH . H 4 HOH B 26 726 210 HOH HOH . H 4 HOH B 27 727 211 HOH HOH . H 4 HOH B 28 728 168 HOH HOH . H 4 HOH B 29 729 187 HOH HOH . H 4 HOH B 30 730 192 HOH HOH . H 4 HOH B 31 731 167 HOH HOH . H 4 HOH B 32 732 20 HOH HOH . H 4 HOH B 33 733 118 HOH HOH . H 4 HOH B 34 734 112 HOH HOH . H 4 HOH B 35 735 42 HOH HOH . H 4 HOH B 36 736 39 HOH HOH . H 4 HOH B 37 737 259 HOH HOH . H 4 HOH B 38 738 58 HOH HOH . H 4 HOH B 39 739 214 HOH HOH . H 4 HOH B 40 740 163 HOH HOH . H 4 HOH B 41 741 215 HOH HOH . H 4 HOH B 42 742 82 HOH HOH . H 4 HOH B 43 743 220 HOH HOH . H 4 HOH B 44 744 24 HOH HOH . H 4 HOH B 45 745 226 HOH HOH . H 4 HOH B 46 746 103 HOH HOH . H 4 HOH B 47 747 204 HOH HOH . H 4 HOH B 48 748 37 HOH HOH . H 4 HOH B 49 749 34 HOH HOH . H 4 HOH B 50 750 95 HOH HOH . H 4 HOH B 51 751 59 HOH HOH . H 4 HOH B 52 752 246 HOH HOH . H 4 HOH B 53 753 156 HOH HOH . H 4 HOH B 54 754 18 HOH HOH . H 4 HOH B 55 755 233 HOH HOH . H 4 HOH B 56 756 159 HOH HOH . H 4 HOH B 57 757 238 HOH HOH . H 4 HOH B 58 758 186 HOH HOH . H 4 HOH B 59 759 249 HOH HOH . H 4 HOH B 60 760 80 HOH HOH . H 4 HOH B 61 761 209 HOH HOH . H 4 HOH B 62 762 231 HOH HOH . H 4 HOH B 63 763 105 HOH HOH . H 4 HOH B 64 764 68 HOH HOH . H 4 HOH B 65 765 228 HOH HOH . H 4 HOH B 66 766 235 HOH HOH . H 4 HOH B 67 767 28 HOH HOH . H 4 HOH B 68 768 63 HOH HOH . H 4 HOH B 69 769 222 HOH HOH . H 4 HOH B 70 770 242 HOH HOH . H 4 HOH B 71 771 151 HOH HOH . H 4 HOH B 72 772 236 HOH HOH . H 4 HOH B 73 773 65 HOH HOH . H 4 HOH B 74 774 218 HOH HOH . H 4 HOH B 75 775 78 HOH HOH . H 4 HOH B 76 776 144 HOH HOH . H 4 HOH B 77 777 97 HOH HOH . H 4 HOH B 78 778 244 HOH HOH . H 4 HOH B 79 779 241 HOH HOH . H 4 HOH B 80 780 203 HOH HOH . H 4 HOH B 81 781 146 HOH HOH . H 4 HOH B 82 782 202 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 -9.85 3.285 8.192 1 29.08 ? C1 EDO 602 A 1 HETATM 2 O O1 EDO . . . D 3 -8.588 3.001 8.834 1 25.2 ? O1 EDO 602 A 1 HETATM 3 C C2 EDO . . . D 3 -10.479 2.003 7.637 1 30.34 ? C2 EDO 602 A 1 HETATM 4 O O2 EDO . . . D 3 -9.619 1.407 6.649 1 26.52 ? O2 EDO 602 A 1 HETATM 5 H H11 EDO . . . D 3 -9.694 3.997 7.379 1 34.9 ? H11 EDO 602 A 1 HETATM 6 H H12 EDO . . . D 3 -10.531 3.743 8.913 1 34.9 ? H12 EDO 602 A 1 HETATM 7 H HO1 EDO . . . D 3 -8.08 3.819 8.922 1 30.24 ? HO1 EDO 602 A 1 HETATM 8 H H21 EDO . . . D 3 -11.447 2.235 7.188 1 36.41 ? H21 EDO 602 A 1 HETATM 9 H H22 EDO . . . D 3 -10.648 1.295 8.451 1 36.41 ? H22 EDO 602 A 1 HETATM 10 H HO2 EDO . . . D 3 -9.792 0.457 6.601 1 31.83 ? HO2 EDO 602 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 163 _model_server_stats.query_time_ms 375 _model_server_stats.encode_time_ms 36 _model_server_stats.element_count 10 #