data_9BI8
#
_model_server_result.job_id            Nhioye3SvEhVcBlF7OGTXg 
_model_server_result.datetime_utc      '2024-12-22 03:09:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9bi8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    9BI8 
#
_exptl.entry_id    9BI8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.4 
_cell.angle_gamma         90 
_cell.entry_id            9BI8 
_cell.length_a            45.3 
_cell.length_b            75.86 
_cell.length_c            86.87 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9BI8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B OE1 GLU 225 B GLU 210 1_555 F NA NA . B NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.945 ? 
metalc ? metalc2 B O ARG 251 B ARG 236 1_555 F NA NA . B NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 144 n n 
S C1 DMS sing 145 n n 
S C2 DMS sing 146 n n 
C1 H11 DMS sing 147 n n 
C1 H12 DMS sing 148 n n 
C1 H13 DMS sing 149 n n 
C2 H21 DMS sing 150 n n 
C2 H22 DMS sing 151 n n 
C2 H23 DMS sing 152 n n 
#
_atom_sites.entry_id                     9BI8 
_atom_sites.fract_transf_matrix[1][1]    0.022075 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00326 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013182 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011636 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 A1APL A 1 301 1 A1APL LIG . 
D 3 DMS B 1 301 301 DMS DMS . 
E 2 A1APL B 1 302 2 A1APL LIG . 
F 4 NA B 1 303 1 NA NA . 
G 5 HOH A 1 401 107 HOH HOH . 
G 5 HOH A 2 402 142 HOH HOH . 
G 5 HOH A 3 403 91 HOH HOH . 
G 5 HOH A 4 404 69 HOH HOH . 
G 5 HOH A 5 405 23 HOH HOH . 
G 5 HOH A 6 406 22 HOH HOH . 
G 5 HOH A 7 407 56 HOH HOH . 
G 5 HOH A 8 408 2 HOH HOH . 
G 5 HOH A 9 409 102 HOH HOH . 
G 5 HOH A 10 410 6 HOH HOH . 
G 5 HOH A 11 411 27 HOH HOH . 
G 5 HOH A 12 412 28 HOH HOH . 
G 5 HOH A 13 413 17 HOH HOH . 
G 5 HOH A 14 414 80 HOH HOH . 
G 5 HOH A 15 415 132 HOH HOH . 
G 5 HOH A 16 416 89 HOH HOH . 
G 5 HOH A 17 417 71 HOH HOH . 
G 5 HOH A 18 418 73 HOH HOH . 
G 5 HOH A 19 419 112 HOH HOH . 
G 5 HOH A 20 420 157 HOH HOH . 
G 5 HOH A 21 421 20 HOH HOH . 
G 5 HOH A 22 422 57 HOH HOH . 
G 5 HOH A 23 423 26 HOH HOH . 
G 5 HOH A 24 424 120 HOH HOH . 
G 5 HOH A 25 425 75 HOH HOH . 
G 5 HOH A 26 426 151 HOH HOH . 
G 5 HOH A 27 427 85 HOH HOH . 
G 5 HOH A 28 428 10 HOH HOH . 
G 5 HOH A 29 429 62 HOH HOH . 
G 5 HOH A 30 430 33 HOH HOH . 
G 5 HOH A 31 431 116 HOH HOH . 
G 5 HOH A 32 432 127 HOH HOH . 
G 5 HOH A 33 433 21 HOH HOH . 
G 5 HOH A 34 434 68 HOH HOH . 
G 5 HOH A 35 435 100 HOH HOH . 
G 5 HOH A 36 436 52 HOH HOH . 
G 5 HOH A 37 437 15 HOH HOH . 
G 5 HOH A 38 438 54 HOH HOH . 
G 5 HOH A 39 439 125 HOH HOH . 
G 5 HOH A 40 440 70 HOH HOH . 
G 5 HOH A 41 441 13 HOH HOH . 
G 5 HOH A 42 442 161 HOH HOH . 
G 5 HOH A 43 443 97 HOH HOH . 
G 5 HOH A 44 444 25 HOH HOH . 
G 5 HOH A 45 445 1 HOH HOH . 
G 5 HOH A 46 446 29 HOH HOH . 
G 5 HOH A 47 447 53 HOH HOH . 
G 5 HOH A 48 448 84 HOH HOH . 
G 5 HOH A 49 449 156 HOH HOH . 
G 5 HOH A 50 450 130 HOH HOH . 
G 5 HOH A 51 451 14 HOH HOH . 
G 5 HOH A 52 452 145 HOH HOH . 
G 5 HOH A 53 453 158 HOH HOH . 
G 5 HOH A 54 454 64 HOH HOH . 
G 5 HOH A 55 455 155 HOH HOH . 
G 5 HOH A 56 456 140 HOH HOH . 
G 5 HOH A 57 457 87 HOH HOH . 
G 5 HOH A 58 458 93 HOH HOH . 
G 5 HOH A 59 459 34 HOH HOH . 
G 5 HOH A 60 460 47 HOH HOH . 
G 5 HOH A 61 461 149 HOH HOH . 
G 5 HOH A 62 462 50 HOH HOH . 
G 5 HOH A 63 463 46 HOH HOH . 
G 5 HOH A 64 464 78 HOH HOH . 
G 5 HOH A 65 465 134 HOH HOH . 
G 5 HOH A 66 466 31 HOH HOH . 
G 5 HOH A 67 467 30 HOH HOH . 
G 5 HOH A 68 468 86 HOH HOH . 
G 5 HOH A 69 469 98 HOH HOH . 
G 5 HOH A 70 470 92 HOH HOH . 
G 5 HOH A 71 471 121 HOH HOH . 
G 5 HOH A 72 472 123 HOH HOH . 
G 5 HOH A 73 473 3 HOH HOH . 
G 5 HOH A 74 474 82 HOH HOH . 
G 5 HOH A 75 475 95 HOH HOH . 
G 5 HOH A 76 476 115 HOH HOH . 
H 5 HOH B 1 401 77 HOH HOH . 
H 5 HOH B 2 402 76 HOH HOH . 
H 5 HOH B 3 403 74 HOH HOH . 
H 5 HOH B 4 404 147 HOH HOH . 
H 5 HOH B 5 405 8 HOH HOH . 
H 5 HOH B 6 406 16 HOH HOH . 
H 5 HOH B 7 407 43 HOH HOH . 
H 5 HOH B 8 408 101 HOH HOH . 
H 5 HOH B 9 409 160 HOH HOH . 
H 5 HOH B 10 410 5 HOH HOH . 
H 5 HOH B 11 411 45 HOH HOH . 
H 5 HOH B 12 412 18 HOH HOH . 
H 5 HOH B 13 413 39 HOH HOH . 
H 5 HOH B 14 414 11 HOH HOH . 
H 5 HOH B 15 415 60 HOH HOH . 
H 5 HOH B 16 416 19 HOH HOH . 
H 5 HOH B 17 417 99 HOH HOH . 
H 5 HOH B 18 418 7 HOH HOH . 
H 5 HOH B 19 419 44 HOH HOH . 
H 5 HOH B 20 420 126 HOH HOH . 
H 5 HOH B 21 421 83 HOH HOH . 
H 5 HOH B 22 422 58 HOH HOH . 
H 5 HOH B 23 423 72 HOH HOH . 
H 5 HOH B 24 424 122 HOH HOH . 
H 5 HOH B 25 425 24 HOH HOH . 
H 5 HOH B 26 426 111 HOH HOH . 
H 5 HOH B 27 427 4 HOH HOH . 
H 5 HOH B 28 428 49 HOH HOH . 
H 5 HOH B 29 429 150 HOH HOH . 
H 5 HOH B 30 430 105 HOH HOH . 
H 5 HOH B 31 431 131 HOH HOH . 
H 5 HOH B 32 432 67 HOH HOH . 
H 5 HOH B 33 433 35 HOH HOH . 
H 5 HOH B 34 434 90 HOH HOH . 
H 5 HOH B 35 435 32 HOH HOH . 
H 5 HOH B 36 436 163 HOH HOH . 
H 5 HOH B 37 437 63 HOH HOH . 
H 5 HOH B 38 438 141 HOH HOH . 
H 5 HOH B 39 439 36 HOH HOH . 
H 5 HOH B 40 440 164 HOH HOH . 
H 5 HOH B 41 441 94 HOH HOH . 
H 5 HOH B 42 442 118 HOH HOH . 
H 5 HOH B 43 443 51 HOH HOH . 
H 5 HOH B 44 444 154 HOH HOH . 
H 5 HOH B 45 445 133 HOH HOH . 
H 5 HOH B 46 446 37 HOH HOH . 
H 5 HOH B 47 447 108 HOH HOH . 
H 5 HOH B 48 448 104 HOH HOH . 
H 5 HOH B 49 449 159 HOH HOH . 
H 5 HOH B 50 450 59 HOH HOH . 
H 5 HOH B 51 451 146 HOH HOH . 
H 5 HOH B 52 452 79 HOH HOH . 
H 5 HOH B 53 453 138 HOH HOH . 
H 5 HOH B 54 454 129 HOH HOH . 
H 5 HOH B 55 455 162 HOH HOH . 
H 5 HOH B 56 456 65 HOH HOH . 
H 5 HOH B 57 457 135 HOH HOH . 
H 5 HOH B 58 458 40 HOH HOH . 
H 5 HOH B 59 459 106 HOH HOH . 
H 5 HOH B 60 460 103 HOH HOH . 
H 5 HOH B 61 461 137 HOH HOH . 
H 5 HOH B 62 462 55 HOH HOH . 
H 5 HOH B 63 463 61 HOH HOH . 
H 5 HOH B 64 464 88 HOH HOH . 
H 5 HOH B 65 465 38 HOH HOH . 
H 5 HOH B 66 466 42 HOH HOH . 
H 5 HOH B 67 467 128 HOH HOH . 
H 5 HOH B 68 468 41 HOH HOH . 
H 5 HOH B 69 469 66 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 3 69.823 -12.804 11.053 1 72.97 ? S DMS 301 B 1 
HETATM 2 O O DMS . . . D 3 71.094 -13.442 10.594 1 70.56 ? O DMS 301 B 1 
HETATM 3 C C1 DMS . . . D 3 69.665 -12.995 12.852 1 50.68 ? C1 DMS 301 B 1 
HETATM 4 C C2 DMS . . . D 3 69.982 -10.997 10.936 1 53.78 ? C2 DMS 301 B 1 
HETATM 5 H H11 DMS . . . D 3 69.548 -14.021 13.09 1 60.94 ? H11 DMS 301 B 1 
HETATM 6 H H12 DMS . . . D 3 70.536 -12.621 13.325 1 60.94 ? H12 DMS 301 B 1 
HETATM 7 H H13 DMS . . . D 3 68.82 -12.456 13.192 1 60.94 ? H13 DMS 301 B 1 
HETATM 8 H H21 DMS . . . D 3 70.068 -10.715 9.919 1 64.66 ? H21 DMS 301 B 1 
HETATM 9 H H22 DMS . . . D 3 70.845 -10.683 11.463 1 64.66 ? H22 DMS 301 B 1 
HETATM 10 H H23 DMS . . . D 3 69.125 -10.539 11.357 1 64.66 ? H23 DMS 301 B 1 
#
_model_server_stats.io_time_ms              157 
_model_server_stats.parse_time_ms           76 
_model_server_stats.create_model_time_ms    85 
_model_server_stats.query_time_ms           1525 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           10 
#