data_9BIT # _model_server_result.job_id fbdi8yiSfww1xFzVj7T7hA _model_server_result.datetime_utc '2024-11-22 06:10:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9bit # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 9BIT # _exptl.entry_id 9BIT _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 435.881 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CLOXACILLIN _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9BIT _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9BIT _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 211 A CYS 211 1_555 A SG CYS 216 A CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 B SG CYS 25 B CYS 22 1_555 B SG CYS 99 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'C19 H18 Cl N3 O5 S' _chem_comp.formula_weight 435.881 _chem_comp.id CXN _chem_comp.mon_nstd_flag . _chem_comp.name CLOXACILLIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '[3-(O-CHLOROPHENYL)-5-METHYL-4-ISOXAZOLYL]PENICILLIN' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CXN doub 70 n n C1 C2 CXN sing 71 n n C1 N7 CXN sing 72 n n C2 C3 CXN sing 73 n n C2 N2 CXN sing 74 n n C2 H2 CXN sing 75 n n C3 N7 CXN sing 76 n n C3 S4 CXN sing 77 n n C3 H3 CXN sing 78 n n N7 C6 CXN sing 79 n n C6 C8 CXN sing 80 n n C6 C5 CXN sing 81 n n C6 H6 CXN sing 82 n n C8 O81 CXN sing 83 n n C8 O82 CXN doub 84 n n O81 H81 CXN sing 85 n n C5 C51 CXN sing 86 n n C5 C52 CXN sing 87 n n C5 S4 CXN sing 88 n n C51 H511 CXN sing 89 n n C51 H512 CXN sing 90 n n C51 H513 CXN sing 91 n n C52 H521 CXN sing 92 n n C52 H522 CXN sing 93 n n C52 H523 CXN sing 94 n n N2 C21 CXN sing 95 n n N2 HN2 CXN sing 96 n n C21 O21 CXN doub 97 n n C21 C22 CXN sing 98 n n C22 C23 CXN doub 99 n y C22 C26 CXN sing 100 n y N25 O24 CXN sing 101 n y N25 C26 CXN doub 102 n y O24 C23 CXN sing 103 n y C23 C27 CXN sing 104 n n C26 C28 CXN sing 105 n y C27 H271 CXN sing 106 n n C27 H272 CXN sing 107 n n C27 H273 CXN sing 108 n n C28 C29 CXN doub 109 n y C28 C33 CXN sing 110 n y C29 CL CXN sing 111 n n C29 C30 CXN sing 112 n y C30 C31 CXN doub 113 n y C30 H30 CXN sing 114 n n C31 C32 CXN sing 115 n y C31 H31 CXN sing 116 n n C32 C33 CXN doub 117 n y C32 H32 CXN sing 118 n n C33 H33 CXN sing 119 n n # _atom_sites.entry_id 9BIT _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id CXN _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 801 _pdbx_nonpoly_scheme.auth_seq_num 801 _pdbx_nonpoly_scheme.pdb_mon_id CXN _pdbx_nonpoly_scheme.auth_mon_id CXU _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CXN . . . C 3 161.323 155.398 157.314 1 40.11 ? C1 CXN 801 A 1 HETATM 2 O O1 CXN . . . C 3 160.462 154.746 157.877 1 42.37 ? O1 CXN 801 A 1 HETATM 3 C C2 CXN . . . C 3 162.475 155.106 156.338 1 40.44 ? C2 CXN 801 A 1 HETATM 4 C C3 CXN . . . C 3 162.87 156.591 156.579 1 41.07 ? C3 CXN 801 A 1 HETATM 5 N N7 CXN . . . C 3 161.617 156.743 157.339 1 38.69 ? N7 CXN 801 A 1 HETATM 6 C C6 CXN . . . C 3 160.731 157.837 156.957 1 41 ? C6 CXN 801 A 1 HETATM 7 C C8 CXN . . . C 3 160.029 158.475 158.128 1 42.26 ? C8 CXN 801 A 1 HETATM 8 O O81 CXN . . . C 3 158.845 158.825 157.94 1 42.53 ? O81 CXN 801 A 1 HETATM 9 O O82 CXN . . . C 3 160.676 158.608 159.195 1 40.6 ? O82 CXN 801 A 1 HETATM 10 C C5 CXN . . . C 3 161.606 158.857 156.171 1 41.46 ? C5 CXN 801 A 1 HETATM 11 C C51 CXN . . . C 3 160.776 159.699 155.205 1 36.92 ? C51 CXN 801 A 1 HETATM 12 C C52 CXN . . . C 3 162.419 159.747 157.108 1 35.35 ? C52 CXN 801 A 1 HETATM 13 S S4 CXN . . . C 3 162.748 157.775 155.212 1 45.44 ? S4 CXN 801 A 1 HETATM 14 N N2 CXN . . . C 3 162.073 154.718 154.997 1 38.22 ? N2 CXN 801 A 1 HETATM 15 C C21 CXN . . . C 3 162.686 153.784 154.252 1 39.39 ? C21 CXN 801 A 1 HETATM 16 O O21 CXN . . . C 3 162.781 153.922 153.033 1 39.28 ? O21 CXN 801 A 1 HETATM 17 C C22 CXN . . . C 3 163.248 152.562 154.882 1 39.46 ? C22 CXN 801 A 1 HETATM 18 N N25 CXN . . . C 3 164.647 150.787 155.008 1 37.02 ? N25 CXN 801 A 1 HETATM 19 O O24 CXN . . . C 3 163.935 150.936 156.223 1 37.91 ? O24 CXN 801 A 1 HETATM 20 C C23 CXN . . . C 3 163.11 151.997 156.122 1 36.92 ? C23 CXN 801 A 1 HETATM 21 C C26 CXN . . . C 3 164.231 151.75 154.229 1 37.92 ? C26 CXN 801 A 1 HETATM 22 C C27 CXN . . . C 3 162.225 152.237 157.289 1 39.05 ? C27 CXN 801 A 1 HETATM 23 C C28 CXN . . . C 3 164.796 151.847 152.866 1 33.8 ? C28 CXN 801 A 1 HETATM 24 C C29 CXN . . . C 3 165.462 152.983 152.411 1 34.9 ? C29 CXN 801 A 1 HETATM 25 CL CL CXN . . . C 3 165.651 154.37 153.434 1 53.58 ? CL CXN 801 A 1 HETATM 26 C C30 CXN . . . C 3 166.001 153.043 151.137 1 36.98 ? C30 CXN 801 A 1 HETATM 27 C C31 CXN . . . C 3 165.877 151.952 150.295 1 40.32 ? C31 CXN 801 A 1 HETATM 28 C C32 CXN . . . C 3 165.223 150.817 150.722 1 35.26 ? C32 CXN 801 A 1 HETATM 29 C C33 CXN . . . C 3 164.685 150.76 151.996 1 31.72 ? C33 CXN 801 A 1 HETATM 30 H H2 CXN . . . C 3 163.158 154.518 156.713 1 37.97 ? H2 CXN 801 A 1 HETATM 31 H H3 CXN . . . C 3 163.673 156.708 157.127 1 38.06 ? H3 CXN 801 A 1 HETATM 32 H H6 CXN . . . C 3 160.044 157.458 156.372 1 37.42 ? H6 CXN 801 A 1 HETATM 33 H H511 CXN . . . C 3 160.296 159.152 154.549 1 37.19 ? H511 CXN 801 A 1 HETATM 34 H H512 CXN . . . C 3 160.107 160.236 155.677 1 37.22 ? H512 CXN 801 A 1 HETATM 35 H H513 CXN . . . C 3 161.345 160.326 154.713 1 36.99 ? H513 CXN 801 A 1 HETATM 36 H H521 CXN . . . C 3 162.943 159.22 157.746 1 37.1 ? H521 CXN 801 A 1 HETATM 37 H H522 CXN . . . C 3 163.044 160.323 156.624 1 36.74 ? H522 CXN 801 A 1 HETATM 38 H H523 CXN . . . C 3 161.833 160.334 157.628 1 36.73 ? H523 CXN 801 A 1 HETATM 39 H HN2 CXN . . . C 3 161.371 155.14 154.666 1 37.2 ? HN2 CXN 801 A 1 HETATM 40 H H271 CXN . . . C 3 162.675 152.791 157.959 1 37.4 ? H271 CXN 801 A 1 HETATM 41 H H272 CXN . . . C 3 161.972 151.389 157.709 1 36.58 ? H272 CXN 801 A 1 HETATM 42 H H273 CXN . . . C 3 161.399 152.687 157.02 1 37.31 ? H273 CXN 801 A 1 HETATM 43 H H30 CXN . . . C 3 166.466 153.847 150.83 1 35.91 ? H30 CXN 801 A 1 HETATM 44 H H31 CXN . . . C 3 166.257 151.988 149.394 1 35.96 ? H31 CXN 801 A 1 HETATM 45 H H32 CXN . . . C 3 165.138 150.047 150.124 1 35.51 ? H32 CXN 801 A 1 HETATM 46 H H33 CXN . . . C 3 164.222 149.947 152.285 1 35.95 ? H33 CXN 801 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 46 #