data_9BJ1 # _model_server_result.job_id lRwkWcGTbo6vFWh6mrtQHA _model_server_result.datetime_utc '2024-12-22 03:12:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9bj1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 9BJ1 # _exptl.entry_id 9BJ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 86.67 _cell.angle_beta 85.37 _cell.angle_gamma 66.7 _cell.entry_id 9BJ1 _cell.length_a 51.483 _cell.length_b 56.998 _cell.length_c 61.527 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9BJ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 38 A LEU 23 1_555 J NA NA . A NA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc2 A O GLY 44 A GLY 29 1_555 J NA NA . A NA 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 355 n n O1 C6 MES sing 356 n n C2 C3 MES sing 357 n n C2 H21 MES sing 358 n n C2 H22 MES sing 359 n n C3 N4 MES sing 360 n n C3 H31 MES sing 361 n n C3 H32 MES sing 362 n n N4 C5 MES sing 363 n n N4 C7 MES sing 364 n n N4 HN4 MES sing 365 n n C5 C6 MES sing 366 n n C5 H51 MES sing 367 n n C5 H52 MES sing 368 n n C6 H61 MES sing 369 n n C6 H62 MES sing 370 n n C7 C8 MES sing 371 n n C7 H71 MES sing 372 n n C7 H72 MES sing 373 n n C8 S MES sing 374 n n C8 H81 MES sing 375 n n C8 H82 MES sing 376 n n S O1S MES doub 377 n n S O2S MES doub 378 n n S O3S MES sing 379 n n # _atom_sites.entry_id 9BJ1 _atom_sites.fract_transf_matrix[1][1] 0.019424 _atom_sites.fract_transf_matrix[1][2] -0.008365 _atom_sites.fract_transf_matrix[1][3] -0.001335 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019102 _atom_sites.fract_transf_matrix[2][3] -0.000546 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016313 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MES A 1 301 231 MES MES . D 3 EDO A 1 302 235 EDO EDO . E 3 EDO A 1 303 237 EDO EDO . F 3 EDO A 1 304 239 EDO EDO . G 4 DMS A 1 305 241 DMS DMS . H 4 DMS A 1 306 243 DMS DMS . I 5 A1APR A 1 307 1 A1APR 209 . J 6 NA A 1 308 1 NA NA . K 2 MES B 1 301 230 MES MES . L 2 MES B 1 302 232 MES MES . M 7 PEG B 1 303 234 PEG PEG . N 3 EDO B 1 304 238 EDO EDO . O 3 EDO B 1 305 240 EDO EDO . P 4 DMS B 1 306 242 DMS DMS . Q 8 A1APQ B 1 307 1 A1APQ 011 . R 9 HOH A 1 401 101 HOH HOH . R 9 HOH A 2 402 46 HOH HOH . R 9 HOH A 3 403 33 HOH HOH . R 9 HOH A 4 404 65 HOH HOH . R 9 HOH A 5 405 99 HOH HOH . R 9 HOH A 6 406 114 HOH HOH . R 9 HOH A 7 407 127 HOH HOH . R 9 HOH A 8 408 60 HOH HOH . R 9 HOH A 9 409 31 HOH HOH . R 9 HOH A 10 410 76 HOH HOH . R 9 HOH A 11 411 10 HOH HOH . R 9 HOH A 12 412 48 HOH HOH . R 9 HOH A 13 413 159 HOH HOH . R 9 HOH A 14 414 119 HOH HOH . R 9 HOH A 15 415 201 HOH HOH . R 9 HOH A 16 416 21 HOH HOH . R 9 HOH A 17 417 155 HOH HOH . R 9 HOH A 18 418 90 HOH HOH . R 9 HOH A 19 419 43 HOH HOH . R 9 HOH A 20 420 209 HOH HOH . R 9 HOH A 21 421 37 HOH HOH . R 9 HOH A 22 422 22 HOH HOH . R 9 HOH A 23 423 126 HOH HOH . R 9 HOH A 24 424 13 HOH HOH . R 9 HOH A 25 425 55 HOH HOH . R 9 HOH A 26 426 83 HOH HOH . R 9 HOH A 27 427 150 HOH HOH . R 9 HOH A 28 428 144 HOH HOH . R 9 HOH A 29 429 62 HOH HOH . R 9 HOH A 30 430 111 HOH HOH . R 9 HOH A 31 431 20 HOH HOH . R 9 HOH A 32 432 25 HOH HOH . R 9 HOH A 33 433 115 HOH HOH . R 9 HOH A 34 434 51 HOH HOH . R 9 HOH A 35 435 89 HOH HOH . R 9 HOH A 36 436 4 HOH HOH . R 9 HOH A 37 437 86 HOH HOH . R 9 HOH A 38 438 3 HOH HOH . R 9 HOH A 39 439 16 HOH HOH . R 9 HOH A 40 440 70 HOH HOH . R 9 HOH A 41 441 52 HOH HOH . R 9 HOH A 42 442 67 HOH HOH . R 9 HOH A 43 443 49 HOH HOH . R 9 HOH A 44 444 27 HOH HOH . R 9 HOH A 45 445 154 HOH HOH . R 9 HOH A 46 446 81 HOH HOH . R 9 HOH A 47 447 72 HOH HOH . R 9 HOH A 48 448 92 HOH HOH . R 9 HOH A 49 449 121 HOH HOH . R 9 HOH A 50 450 113 HOH HOH . R 9 HOH A 51 451 157 HOH HOH . R 9 HOH A 52 452 165 HOH HOH . R 9 HOH A 53 453 122 HOH HOH . R 9 HOH A 54 454 182 HOH HOH . R 9 HOH A 55 455 6 HOH HOH . R 9 HOH A 56 456 210 HOH HOH . R 9 HOH A 57 457 164 HOH HOH . R 9 HOH A 58 458 131 HOH HOH . R 9 HOH A 59 459 35 HOH HOH . R 9 HOH A 60 460 64 HOH HOH . R 9 HOH A 61 461 137 HOH HOH . R 9 HOH A 62 462 61 HOH HOH . R 9 HOH A 63 463 135 HOH HOH . R 9 HOH A 64 464 32 HOH HOH . R 9 HOH A 65 465 34 HOH HOH . R 9 HOH A 66 466 50 HOH HOH . R 9 HOH A 67 467 132 HOH HOH . R 9 HOH A 68 468 141 HOH HOH . R 9 HOH A 69 469 112 HOH HOH . R 9 HOH A 70 470 18 HOH HOH . R 9 HOH A 71 471 199 HOH HOH . R 9 HOH A 72 472 222 HOH HOH . R 9 HOH A 73 473 163 HOH HOH . R 9 HOH A 74 474 194 HOH HOH . R 9 HOH A 75 475 5 HOH HOH . R 9 HOH A 76 476 190 HOH HOH . R 9 HOH A 77 477 38 HOH HOH . R 9 HOH A 78 478 227 HOH HOH . R 9 HOH A 79 479 226 HOH HOH . R 9 HOH A 80 480 84 HOH HOH . R 9 HOH A 81 481 188 HOH HOH . R 9 HOH A 82 482 1 HOH HOH . R 9 HOH A 83 483 180 HOH HOH . R 9 HOH A 84 484 218 HOH HOH . S 9 HOH B 1 401 100 HOH HOH . S 9 HOH B 2 402 1 HOH HOH . S 9 HOH B 3 403 93 HOH HOH . S 9 HOH B 4 404 184 HOH HOH . S 9 HOH B 5 405 54 HOH HOH . S 9 HOH B 6 406 133 HOH HOH . S 9 HOH B 7 407 15 HOH HOH . S 9 HOH B 8 408 30 HOH HOH . S 9 HOH B 9 409 75 HOH HOH . S 9 HOH B 10 410 28 HOH HOH . S 9 HOH B 11 411 79 HOH HOH . S 9 HOH B 12 412 130 HOH HOH . S 9 HOH B 13 413 42 HOH HOH . S 9 HOH B 14 414 103 HOH HOH . S 9 HOH B 15 415 102 HOH HOH . S 9 HOH B 16 416 123 HOH HOH . S 9 HOH B 17 417 47 HOH HOH . S 9 HOH B 18 418 143 HOH HOH . S 9 HOH B 19 419 153 HOH HOH . S 9 HOH B 20 420 116 HOH HOH . S 9 HOH B 21 421 191 HOH HOH . S 9 HOH B 22 422 215 HOH HOH . S 9 HOH B 23 423 156 HOH HOH . S 9 HOH B 24 424 170 HOH HOH . S 9 HOH B 25 425 138 HOH HOH . S 9 HOH B 26 426 110 HOH HOH . S 9 HOH B 27 427 17 HOH HOH . S 9 HOH B 28 428 78 HOH HOH . S 9 HOH B 29 429 171 HOH HOH . S 9 HOH B 30 430 53 HOH HOH . S 9 HOH B 31 431 107 HOH HOH . S 9 HOH B 32 432 148 HOH HOH . S 9 HOH B 33 433 9 HOH HOH . S 9 HOH B 34 434 212 HOH HOH . S 9 HOH B 35 435 136 HOH HOH . S 9 HOH B 36 436 39 HOH HOH . S 9 HOH B 37 437 202 HOH HOH . S 9 HOH B 38 438 11 HOH HOH . S 9 HOH B 39 439 19 HOH HOH . S 9 HOH B 40 440 105 HOH HOH . S 9 HOH B 41 441 12 HOH HOH . S 9 HOH B 42 442 41 HOH HOH . S 9 HOH B 43 443 8 HOH HOH . S 9 HOH B 44 444 106 HOH HOH . S 9 HOH B 45 445 24 HOH HOH . S 9 HOH B 46 446 80 HOH HOH . S 9 HOH B 47 447 23 HOH HOH . S 9 HOH B 48 448 63 HOH HOH . S 9 HOH B 49 449 2 HOH HOH . S 9 HOH B 50 450 104 HOH HOH . S 9 HOH B 51 451 14 HOH HOH . S 9 HOH B 52 452 29 HOH HOH . S 9 HOH B 53 453 71 HOH HOH . S 9 HOH B 54 454 59 HOH HOH . S 9 HOH B 55 455 91 HOH HOH . S 9 HOH B 56 456 26 HOH HOH . S 9 HOH B 57 457 169 HOH HOH . S 9 HOH B 58 458 147 HOH HOH . S 9 HOH B 59 459 204 HOH HOH . S 9 HOH B 60 460 197 HOH HOH . S 9 HOH B 61 461 36 HOH HOH . S 9 HOH B 62 462 82 HOH HOH . S 9 HOH B 63 463 69 HOH HOH . S 9 HOH B 64 464 151 HOH HOH . S 9 HOH B 65 465 152 HOH HOH . S 9 HOH B 66 466 160 HOH HOH . S 9 HOH B 67 467 108 HOH HOH . S 9 HOH B 68 468 128 HOH HOH . S 9 HOH B 69 469 172 HOH HOH . S 9 HOH B 70 470 196 HOH HOH . S 9 HOH B 71 471 139 HOH HOH . S 9 HOH B 72 472 118 HOH HOH . S 9 HOH B 73 473 158 HOH HOH . S 9 HOH B 74 474 40 HOH HOH . S 9 HOH B 75 475 185 HOH HOH . S 9 HOH B 76 476 198 HOH HOH . S 9 HOH B 77 477 125 HOH HOH . S 9 HOH B 78 478 109 HOH HOH . S 9 HOH B 79 479 206 HOH HOH . S 9 HOH B 80 480 68 HOH HOH . S 9 HOH B 81 481 45 HOH HOH . S 9 HOH B 82 482 183 HOH HOH . S 9 HOH B 83 483 44 HOH HOH . S 9 HOH B 84 484 124 HOH HOH . S 9 HOH B 85 485 176 HOH HOH . S 9 HOH B 86 486 74 HOH HOH . S 9 HOH B 87 487 7 HOH HOH . S 9 HOH B 88 488 203 HOH HOH . S 9 HOH B 89 489 162 HOH HOH . S 9 HOH B 90 490 56 HOH HOH . S 9 HOH B 91 491 129 HOH HOH . S 9 HOH B 92 492 58 HOH HOH . S 9 HOH B 93 493 224 HOH HOH . S 9 HOH B 94 494 179 HOH HOH . S 9 HOH B 95 495 120 HOH HOH . S 9 HOH B 96 496 77 HOH HOH . S 9 HOH B 97 497 85 HOH HOH . S 9 HOH B 98 498 96 HOH HOH . S 9 HOH B 99 499 140 HOH HOH . S 9 HOH B 100 500 213 HOH HOH . S 9 HOH B 101 501 175 HOH HOH . S 9 HOH B 102 502 173 HOH HOH . S 9 HOH B 103 503 178 HOH HOH . S 9 HOH B 104 504 177 HOH HOH . S 9 HOH B 105 505 174 HOH HOH . S 9 HOH B 106 506 168 HOH HOH . S 9 HOH B 107 507 94 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . C 2 -1.211 34.368 5.041 1 50.81 ? O1 MES 301 A 1 HETATM 2 C C2 MES . . . C 2 -0.22 33.996 6.012 1 47.78 ? C2 MES 301 A 1 HETATM 3 C C3 MES . . . C 2 -0.364 34.869 7.266 1 51.29 ? C3 MES 301 A 1 HETATM 4 N N4 MES . . . C 2 -0.16 36.247 6.832 1 50.36 ? N4 MES 301 A 1 HETATM 5 C C5 MES . . . C 2 -1.122 36.69 5.81 1 56.7 ? C5 MES 301 A 1 HETATM 6 C C6 MES . . . C 2 -1.085 35.732 4.627 1 48.05 ? C6 MES 301 A 1 HETATM 7 C C7 MES . . . C 2 -0.016 37.242 7.889 1 46.83 ? C7 MES 301 A 1 HETATM 8 C C8 MES . . . C 2 1.343 37.039 8.549 1 63.69 ? C8 MES 301 A 1 HETATM 9 S S MES . . . C 2 1.421 37.946 9.947 1 71.52 ? S MES 301 A 1 HETATM 10 O O1S MES . . . C 2 0.723 39.239 9.752 1 63.26 ? O1S MES 301 A 1 HETATM 11 O O2S MES . . . C 2 2.838 38.201 10.293 1 56.58 ? O2S MES 301 A 1 HETATM 12 O O3S MES . . . C 2 0.791 37.192 11.051 1 55.98 ? O3S MES 301 A 1 HETATM 13 H H21 MES . . . C 2 0.778 34.121 5.587 1 57.36 ? H21 MES 301 A 1 HETATM 14 H H22 MES . . . C 2 -0.342 32.944 6.279 1 57.36 ? H22 MES 301 A 1 HETATM 15 H H31 MES . . . C 2 -1.355 34.747 7.708 1 61.57 ? H31 MES 301 A 1 HETATM 16 H H32 MES . . . C 2 0.376 34.588 8.018 1 61.57 ? H32 MES 301 A 1 HETATM 17 H HN4 MES . . . C 2 0.752 36.198 6.403 1 60.46 ? HN4 MES 301 A 1 HETATM 18 H H51 MES . . . C 2 -0.871 37.699 5.477 1 68.07 ? H51 MES 301 A 1 HETATM 19 H H52 MES . . . C 2 -2.128 36.716 6.234 1 68.07 ? H52 MES 301 A 1 HETATM 20 H H61 MES . . . C 2 -0.143 35.86 4.089 1 57.69 ? H61 MES 301 A 1 HETATM 21 H H62 MES . . . C 2 -1.898 35.977 3.94 1 57.69 ? H62 MES 301 A 1 HETATM 22 H H71 MES . . . C 2 -0.087 38.248 7.472 1 56.22 ? H71 MES 301 A 1 HETATM 23 H H72 MES . . . C 2 -0.814 37.127 8.626 1 56.22 ? H72 MES 301 A 1 HETATM 24 H H81 MES . . . C 2 2.137 37.343 7.864 1 76.45 ? H81 MES 301 A 1 HETATM 25 H H82 MES . . . C 2 1.488 35.982 8.783 1 76.45 ? H82 MES 301 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #