data_9BLP # _model_server_result.job_id -JfUuu-EXGn-FZym8FoUaw _model_server_result.datetime_utc '2025-06-20 16:20:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9blp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 9BLP # _exptl.entry_id 9BLP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.107 _cell.angle_gamma 90 _cell.entry_id 9BLP _cell.length_a 54.907 _cell.length_b 44.166 _cell.length_c 64.704 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9BLP _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 24 A ASP 455 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc2 A OD2 ASP 24 A ASP 455 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc3 A O ASN 40 A ASN 471 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc4 A OD1 ASP 43 A ASP 474 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc5 A O GLY 44 A GLY 475 1_555 D CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc6 A OD1 ASP 126 A ASP 557 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc7 A OD1 ASP 128 A ASP 559 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc8 A OD1 ASP 130 A ASP 561 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc9 A O ASN 132 A ASN 563 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc10 A OD2 ASP 134 A ASP 565 1_555 C CA CA . A CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc11 C CA CA . A CA 602 1_555 E O HOH . A HOH 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc12 D CA CA . A CA 603 1_555 E O HOH . A HOH 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc13 D CA CA . A CA 603 1_555 E O HOH . A HOH 858 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 9BLP _atom_sites.fract_transf_matrix[1][1] 0.018213 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006667 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022642 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016458 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 601 201 EDO EDO . C 3 CA A 1 602 1 CA CA . D 3 CA A 1 603 2 CA CA . E 4 HOH A 1 701 214 HOH HOH . E 4 HOH A 2 702 187 HOH HOH . E 4 HOH A 3 703 150 HOH HOH . E 4 HOH A 4 704 126 HOH HOH . E 4 HOH A 5 705 58 HOH HOH . E 4 HOH A 6 706 13 HOH HOH . E 4 HOH A 7 707 128 HOH HOH . E 4 HOH A 8 708 117 HOH HOH . E 4 HOH A 9 709 27 HOH HOH . E 4 HOH A 10 710 129 HOH HOH . E 4 HOH A 11 711 124 HOH HOH . E 4 HOH A 12 712 193 HOH HOH . E 4 HOH A 13 713 156 HOH HOH . E 4 HOH A 14 714 14 HOH HOH . E 4 HOH A 15 715 195 HOH HOH . E 4 HOH A 16 716 2 HOH HOH . E 4 HOH A 17 717 154 HOH HOH . E 4 HOH A 18 718 141 HOH HOH . E 4 HOH A 19 719 94 HOH HOH . E 4 HOH A 20 720 57 HOH HOH . E 4 HOH A 21 721 161 HOH HOH . E 4 HOH A 22 722 37 HOH HOH . E 4 HOH A 23 723 228 HOH HOH . E 4 HOH A 24 724 73 HOH HOH . E 4 HOH A 25 725 84 HOH HOH . E 4 HOH A 26 726 54 HOH HOH . E 4 HOH A 27 727 60 HOH HOH . E 4 HOH A 28 728 163 HOH HOH . E 4 HOH A 29 729 144 HOH HOH . E 4 HOH A 30 730 162 HOH HOH . E 4 HOH A 31 731 97 HOH HOH . E 4 HOH A 32 732 167 HOH HOH . E 4 HOH A 33 733 189 HOH HOH . E 4 HOH A 34 734 208 HOH HOH . E 4 HOH A 35 735 120 HOH HOH . E 4 HOH A 36 736 83 HOH HOH . E 4 HOH A 37 737 4 HOH HOH . E 4 HOH A 38 738 16 HOH HOH . E 4 HOH A 39 739 145 HOH HOH . E 4 HOH A 40 740 104 HOH HOH . E 4 HOH A 41 741 20 HOH HOH . E 4 HOH A 42 742 93 HOH HOH . E 4 HOH A 43 743 131 HOH HOH . E 4 HOH A 44 744 15 HOH HOH . E 4 HOH A 45 745 46 HOH HOH . E 4 HOH A 46 746 138 HOH HOH . E 4 HOH A 47 747 12 HOH HOH . E 4 HOH A 48 748 139 HOH HOH . E 4 HOH A 49 749 127 HOH HOH . E 4 HOH A 50 750 86 HOH HOH . E 4 HOH A 51 751 157 HOH HOH . E 4 HOH A 52 752 134 HOH HOH . E 4 HOH A 53 753 66 HOH HOH . E 4 HOH A 54 754 215 HOH HOH . E 4 HOH A 55 755 121 HOH HOH . E 4 HOH A 56 756 85 HOH HOH . E 4 HOH A 57 757 69 HOH HOH . E 4 HOH A 58 758 91 HOH HOH . E 4 HOH A 59 759 123 HOH HOH . E 4 HOH A 60 760 165 HOH HOH . E 4 HOH A 61 761 133 HOH HOH . E 4 HOH A 62 762 23 HOH HOH . E 4 HOH A 63 763 81 HOH HOH . E 4 HOH A 64 764 35 HOH HOH . E 4 HOH A 65 765 38 HOH HOH . E 4 HOH A 66 766 56 HOH HOH . E 4 HOH A 67 767 11 HOH HOH . E 4 HOH A 68 768 44 HOH HOH . E 4 HOH A 69 769 143 HOH HOH . E 4 HOH A 70 770 65 HOH HOH . E 4 HOH A 71 771 204 HOH HOH . E 4 HOH A 72 772 119 HOH HOH . E 4 HOH A 73 773 5 HOH HOH . E 4 HOH A 74 774 76 HOH HOH . E 4 HOH A 75 775 63 HOH HOH . E 4 HOH A 76 776 32 HOH HOH . E 4 HOH A 77 777 48 HOH HOH . E 4 HOH A 78 778 43 HOH HOH . E 4 HOH A 79 779 68 HOH HOH . E 4 HOH A 80 780 151 HOH HOH . E 4 HOH A 81 781 74 HOH HOH . E 4 HOH A 82 782 70 HOH HOH . E 4 HOH A 83 783 92 HOH HOH . E 4 HOH A 84 784 62 HOH HOH . E 4 HOH A 85 785 24 HOH HOH . E 4 HOH A 86 786 174 HOH HOH . E 4 HOH A 87 787 3 HOH HOH . E 4 HOH A 88 788 6 HOH HOH . E 4 HOH A 89 789 130 HOH HOH . E 4 HOH A 90 790 100 HOH HOH . E 4 HOH A 91 791 34 HOH HOH . E 4 HOH A 92 792 19 HOH HOH . E 4 HOH A 93 793 22 HOH HOH . E 4 HOH A 94 794 1 HOH HOH . E 4 HOH A 95 795 47 HOH HOH . E 4 HOH A 96 796 198 HOH HOH . E 4 HOH A 97 797 153 HOH HOH . E 4 HOH A 98 798 8 HOH HOH . E 4 HOH A 99 799 168 HOH HOH . E 4 HOH A 100 800 136 HOH HOH . E 4 HOH A 101 801 101 HOH HOH . E 4 HOH A 102 802 200 HOH HOH . E 4 HOH A 103 803 158 HOH HOH . E 4 HOH A 104 804 17 HOH HOH . E 4 HOH A 105 805 155 HOH HOH . E 4 HOH A 106 806 59 HOH HOH . E 4 HOH A 107 807 7 HOH HOH . E 4 HOH A 108 808 29 HOH HOH . E 4 HOH A 109 809 26 HOH HOH . E 4 HOH A 110 810 55 HOH HOH . E 4 HOH A 111 811 53 HOH HOH . E 4 HOH A 112 812 82 HOH HOH . E 4 HOH A 113 813 30 HOH HOH . E 4 HOH A 114 814 199 HOH HOH . E 4 HOH A 115 815 135 HOH HOH . E 4 HOH A 116 816 122 HOH HOH . E 4 HOH A 117 817 219 HOH HOH . E 4 HOH A 118 818 21 HOH HOH . E 4 HOH A 119 819 102 HOH HOH . E 4 HOH A 120 820 210 HOH HOH . E 4 HOH A 121 821 49 HOH HOH . E 4 HOH A 122 822 9 HOH HOH . E 4 HOH A 123 823 87 HOH HOH . E 4 HOH A 124 824 90 HOH HOH . E 4 HOH A 125 825 89 HOH HOH . E 4 HOH A 126 826 75 HOH HOH . E 4 HOH A 127 827 36 HOH HOH . E 4 HOH A 128 828 105 HOH HOH . E 4 HOH A 129 829 31 HOH HOH . E 4 HOH A 130 830 196 HOH HOH . E 4 HOH A 131 831 78 HOH HOH . E 4 HOH A 132 832 51 HOH HOH . E 4 HOH A 133 833 25 HOH HOH . E 4 HOH A 134 834 40 HOH HOH . E 4 HOH A 135 835 118 HOH HOH . E 4 HOH A 136 836 202 HOH HOH . E 4 HOH A 137 837 79 HOH HOH . E 4 HOH A 138 838 217 HOH HOH . E 4 HOH A 139 839 18 HOH HOH . E 4 HOH A 140 840 45 HOH HOH . E 4 HOH A 141 841 64 HOH HOH . E 4 HOH A 142 842 173 HOH HOH . E 4 HOH A 143 843 194 HOH HOH . E 4 HOH A 144 844 220 HOH HOH . E 4 HOH A 145 845 28 HOH HOH . E 4 HOH A 146 846 183 HOH HOH . E 4 HOH A 147 847 132 HOH HOH . E 4 HOH A 148 848 33 HOH HOH . E 4 HOH A 149 849 112 HOH HOH . E 4 HOH A 150 850 218 HOH HOH . E 4 HOH A 151 851 72 HOH HOH . E 4 HOH A 152 852 186 HOH HOH . E 4 HOH A 153 853 140 HOH HOH . E 4 HOH A 154 854 225 HOH HOH . E 4 HOH A 155 855 172 HOH HOH . E 4 HOH A 156 856 125 HOH HOH . E 4 HOH A 157 857 61 HOH HOH . E 4 HOH A 158 858 116 HOH HOH . E 4 HOH A 159 859 181 HOH HOH . E 4 HOH A 160 860 113 HOH HOH . E 4 HOH A 161 861 211 HOH HOH . E 4 HOH A 162 862 191 HOH HOH . E 4 HOH A 163 863 41 HOH HOH . E 4 HOH A 164 864 148 HOH HOH . E 4 HOH A 165 865 212 HOH HOH . E 4 HOH A 166 866 103 HOH HOH . E 4 HOH A 167 867 177 HOH HOH . E 4 HOH A 168 868 77 HOH HOH . E 4 HOH A 169 869 184 HOH HOH . E 4 HOH A 170 870 197 HOH HOH . E 4 HOH A 171 871 176 HOH HOH . E 4 HOH A 172 872 201 HOH HOH . E 4 HOH A 173 873 39 HOH HOH . E 4 HOH A 174 874 178 HOH HOH . E 4 HOH A 175 875 213 HOH HOH . E 4 HOH A 176 876 80 HOH HOH . E 4 HOH A 177 878 216 HOH HOH . E 4 HOH A 178 879 111 HOH HOH . E 4 HOH A 179 880 223 HOH HOH . E 4 HOH A 180 881 182 HOH HOH . E 4 HOH A 181 882 114 HOH HOH . E 4 HOH A 182 883 67 HOH HOH . E 4 HOH A 183 884 142 HOH HOH . E 4 HOH A 184 885 71 HOH HOH . E 4 HOH A 185 886 159 HOH HOH . E 4 HOH A 186 887 50 HOH HOH . E 4 HOH A 187 888 190 HOH HOH . E 4 HOH A 188 889 110 HOH HOH . E 4 HOH A 189 890 115 HOH HOH . E 4 HOH A 190 891 222 HOH HOH . E 4 HOH A 191 892 209 HOH HOH . E 4 HOH A 192 893 221 HOH HOH . E 4 HOH A 193 894 224 HOH HOH . E 4 HOH A 194 895 188 HOH HOH . E 4 HOH A 195 896 226 HOH HOH . E 4 HOH A 196 897 185 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 4.364 -18.689 5.338 1 20 0 C1 EDO 601 A 1 HETATM 2 O O1 EDO . . . B 2 5.685 -18.943 5.689 1 12.07 0 O1 EDO 601 A 1 HETATM 3 C C2 EDO . . . B 2 3.383 -19.423 6.139 1 20.11 0 C2 EDO 601 A 1 HETATM 4 O O2 EDO . . . B 2 2.069 -18.953 5.985 1 28.8 0 O2 EDO 601 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #