data_9BOQ # _model_server_result.job_id 9hRbgHWe7saEcHe6qP2wYg _model_server_result.datetime_utc '2024-10-15 14:31:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9boq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"JA","auth_seq_id":903}' # _entry.id 9BOQ # _exptl.entry_id 9BOQ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 598.707 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-(2,6-difluoro-4-{[(4P)-5-{[(2S)-hexan-2-yl]sulfanyl}-4-(pyridin-3-yl)-4H-1,2,4-triazol-3-yl]methoxy}phenyl)prop-2-yn-1-yl (1-methylpiperidin-4-yl)carbamate' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9BOQ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9BOQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 12-meric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 O N N ? 3 R N N ? 3 U N N ? 3 X N N ? 3 AA N N ? 3 DA N N ? 3 GA N N ? 3 JA N N ? 3 MA N N ? 3 PA N N ? 3 SA N N ? 3 VA N N # _chem_comp.formula 'C30 H36 F2 N6 O3 S' _chem_comp.formula_weight 598.707 _chem_comp.id XKM _chem_comp.mon_nstd_flag . _chem_comp.name '3-(2,6-difluoro-4-{[(4P)-5-{[(2S)-hexan-2-yl]sulfanyl}-4-(pyridin-3-yl)-4H-1,2,4-triazol-3-yl]methoxy}phenyl)prop-2-yn-1-yl (1-methylpiperidin-4-yl)carbamate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C13 XKM sing 418 n n C12 O11 XKM sing 419 n n C13 C14 XKM trip 420 n n C14 C15 XKM sing 421 n n C15 C16 XKM doub 422 n y C15 C41 XKM sing 423 n y C16 C18 XKM sing 424 n y C16 F17 XKM sing 425 n n C18 C19 XKM doub 426 n y C19 C40 XKM sing 427 n y C19 O20 XKM sing 428 n n C21 C22 XKM sing 429 n n C21 O20 XKM sing 430 n n C22 N23 XKM doub 431 n y C22 N33 XKM sing 432 n y C01 C02 XKM sing 433 n n C01 C07 XKM sing 434 n n C02 N03 XKM sing 435 n n C04 N03 XKM sing 436 n n C05 C06 XKM sing 437 n n C05 N03 XKM sing 438 n n C06 C07 XKM sing 439 n n C07 N08 XKM sing 440 n n C09 N08 XKM sing 441 n n C09 O10 XKM doub 442 n n C09 O11 XKM sing 443 n n C25 N24 XKM doub 444 n y C25 N33 XKM sing 445 n y C25 S26 XKM sing 446 n n C27 C28 XKM sing 447 n n C27 C32 XKM sing 448 n n C27 S26 XKM sing 449 n n C28 C29 XKM sing 450 n n C29 C30 XKM sing 451 n n C30 C31 XKM sing 452 n n C34 C35 XKM doub 453 n y C34 C39 XKM sing 454 n y C34 N33 XKM sing 455 n n C35 N36 XKM sing 456 n y C37 C38 XKM sing 457 n y C37 N36 XKM doub 458 n y C38 C39 XKM doub 459 n y C40 C41 XKM doub 460 n y C41 F42 XKM sing 461 n n N23 N24 XKM sing 462 n y C12 H1 XKM sing 463 n n C12 H2 XKM sing 464 n n C18 H3 XKM sing 465 n n C21 H4 XKM sing 466 n n C21 H5 XKM sing 467 n n C01 H6 XKM sing 468 n n C01 H7 XKM sing 469 n n C02 H8 XKM sing 470 n n C02 H9 XKM sing 471 n n C04 H10 XKM sing 472 n n C04 H11 XKM sing 473 n n C04 H12 XKM sing 474 n n C05 H13 XKM sing 475 n n C05 H14 XKM sing 476 n n C06 H15 XKM sing 477 n n C06 H16 XKM sing 478 n n C07 H17 XKM sing 479 n n C27 H18 XKM sing 480 n n C28 H19 XKM sing 481 n n C28 H20 XKM sing 482 n n C29 H21 XKM sing 483 n n C29 H22 XKM sing 484 n n C30 H23 XKM sing 485 n n C30 H24 XKM sing 486 n n C31 H25 XKM sing 487 n n C31 H26 XKM sing 488 n n C31 H27 XKM sing 489 n n C32 H28 XKM sing 490 n n C32 H29 XKM sing 491 n n C32 H30 XKM sing 492 n n C35 H31 XKM sing 493 n n C37 H32 XKM sing 494 n n C38 H33 XKM sing 495 n n C39 H34 XKM sing 496 n n C40 H35 XKM sing 497 n n N08 H37 XKM sing 498 n n # _atom_sites.entry_id 9BOQ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 ADP A 1 901 901 ADP ADP . N 2 ADP A 1 902 902 ADP ADP . O 3 XKM A 1 903 903 XKM 462 . P 2 ADP B 1 901 901 ADP ADP . Q 2 ADP B 1 902 902 ADP ADP . R 3 XKM B 1 903 903 XKM 462 . S 2 ADP C 1 901 901 ADP ADP . T 2 ADP C 1 902 902 ADP ADP . U 3 XKM C 1 903 903 XKM 462 . V 2 ADP D 1 901 901 ADP ADP . W 2 ADP D 1 902 902 ADP ADP . X 3 XKM D 1 903 903 XKM 462 . Y 2 ADP E 1 901 901 ADP ADP . Z 2 ADP E 1 902 902 ADP ADP . AA 3 XKM E 1 903 903 XKM 462 . BA 2 ADP F 1 901 901 ADP ADP . CA 2 ADP F 1 902 902 ADP ADP . DA 3 XKM F 1 903 903 XKM 462 . EA 2 ADP G 1 901 901 ADP ADP . FA 2 ADP G 1 902 902 ADP ADP . GA 3 XKM G 1 903 903 XKM 462 . HA 2 ADP H 1 901 901 ADP ADP . IA 2 ADP H 1 902 902 ADP ADP . JA 3 XKM H 1 903 903 XKM 462 . KA 2 ADP I 1 901 901 ADP ADP . LA 2 ADP I 1 902 902 ADP ADP . MA 3 XKM I 1 903 903 XKM 462 . NA 2 ADP J 1 901 901 ADP ADP . OA 2 ADP J 1 902 902 ADP ADP . PA 3 XKM J 1 903 903 XKM 462 . QA 2 ADP K 1 901 901 ADP ADP . RA 2 ADP K 1 902 902 ADP ADP . SA 3 XKM K 1 903 903 XKM 462 . TA 2 ADP L 1 901 901 ADP ADP . UA 2 ADP L 1 902 902 ADP ADP . VA 3 XKM L 1 903 903 XKM 462 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C12 XKM . . . JA 3 141.07 179.574 157.51 1 37.73 ? C12 XKM 903 H 1 HETATM 2 C C13 XKM . . . JA 3 141.757 178.373 156.784 1 30.92 ? C13 XKM 903 H 1 HETATM 3 C C14 XKM . . . JA 3 142.289 177.434 156.222 1 27.82 ? C14 XKM 903 H 1 HETATM 4 C C15 XKM . . . JA 3 142.917 176.318 155.557 1 31.95 ? C15 XKM 903 H 1 HETATM 5 C C16 XKM . . . JA 3 142.373 175.084 155.442 1 32.28 ? C16 XKM 903 H 1 HETATM 6 C C18 XKM . . . JA 3 142.944 174.032 154.825 1 36.22 ? C18 XKM 903 H 1 HETATM 7 C C19 XKM . . . JA 3 144.137 174.128 154.257 1 37 ? C19 XKM 903 H 1 HETATM 8 C C21 XKM . . . JA 3 145.025 171.894 154.581 1 26.17 ? C21 XKM 903 H 1 HETATM 9 C C22 XKM . . . JA 3 146.318 171.284 154.112 1 30.57 ? C22 XKM 903 H 1 HETATM 10 C C01 XKM . . . JA 3 140.775 185.048 158.536 1 35.76 ? C01 XKM 903 H 1 HETATM 11 C C02 XKM . . . JA 3 140.516 185.132 160.066 1 35.62 ? C02 XKM 903 H 1 HETATM 12 C C04 XKM . . . JA 3 141.209 184.559 162.153 1 35.47 ? C04 XKM 903 H 1 HETATM 13 C C05 XKM . . . JA 3 142.738 184.114 160.488 1 41.63 ? C05 XKM 903 H 1 HETATM 14 C C06 XKM . . . JA 3 143.006 184.032 158.983 1 38.06 ? C06 XKM 903 H 1 HETATM 15 C C07 XKM . . . JA 3 141.74 183.948 158.14 1 38.94 ? C07 XKM 903 H 1 HETATM 16 C C09 XKM . . . JA 3 140.326 181.925 157.252 1 43.25 ? C09 XKM 903 H 1 HETATM 17 C C25 XKM . . . JA 3 148.501 170.621 154.168 1 26.9 ? C25 XKM 903 H 1 HETATM 18 C C27 XKM . . . JA 3 150.255 168.561 154.858 1 32.47 ? C27 XKM 903 H 1 HETATM 19 C C28 XKM . . . JA 3 151.818 168.397 155.223 1 30.78 ? C28 XKM 903 H 1 HETATM 20 C C29 XKM . . . JA 3 152.083 166.987 155.711 1 30.56 ? C29 XKM 903 H 1 HETATM 21 C C30 XKM . . . JA 3 151.437 165.779 155.079 1 28.46 ? C30 XKM 903 H 1 HETATM 22 C C31 XKM . . . JA 3 149.984 166.206 154.791 1 26.89 ? C31 XKM 903 H 1 HETATM 23 C C32 XKM . . . JA 3 150.011 167.623 153.783 1 30.96 ? C32 XKM 903 H 1 HETATM 24 C C34 XKM . . . JA 3 147.732 171.704 156.092 1 23.54 ? C34 XKM 903 H 1 HETATM 25 C C35 XKM . . . JA 3 148.031 173.122 156.268 1 26.95 ? C35 XKM 903 H 1 HETATM 26 C C37 XKM . . . JA 3 148.285 172.621 158.609 1 33.88 ? C37 XKM 903 H 1 HETATM 27 C C38 XKM . . . JA 3 148.017 171.275 158.525 1 29.97 ? C38 XKM 903 H 1 HETATM 28 C C39 XKM . . . JA 3 147.699 170.748 157.068 1 26.3 ? C39 XKM 903 H 1 HETATM 29 C C40 XKM . . . JA 3 144.853 175.338 154.279 1 36.94 ? C40 XKM 903 H 1 HETATM 30 C C41 XKM . . . JA 3 144.216 176.369 154.922 1 38.43 ? C41 XKM 903 H 1 HETATM 31 F F17 XKM . . . JA 3 141.205 174.813 155.942 1 29.38 ? F17 XKM 903 H 1 HETATM 32 F F42 XKM . . . JA 3 144.877 177.506 154.948 1 36.42 ? F42 XKM 903 H 1 HETATM 33 N N03 XKM . . . JA 3 141.742 185.1 160.931 1 40.91 ? N03 XKM 903 H 1 HETATM 34 N N08 XKM . . . JA 3 141.109 182.568 158.35 1 41.94 ? N08 XKM 903 H 1 HETATM 35 N N23 XKM . . . JA 3 146.735 170.646 152.947 1 28.51 ? N23 XKM 903 H 1 HETATM 36 N N24 XKM . . . JA 3 147.996 170.266 152.981 1 26.3 ? N24 XKM 903 H 1 HETATM 37 N N33 XKM . . . JA 3 147.464 171.244 154.843 1 26.68 ? N33 XKM 903 H 1 HETATM 38 N N36 XKM . . . JA 3 148.279 173.471 157.492 1 27.91 ? N36 XKM 903 H 1 HETATM 39 O O10 XKM . . . JA 3 139.289 182.421 156.842 1 37.92 ? O10 XKM 903 H 1 HETATM 40 O O11 XKM . . . JA 3 140.788 180.721 156.662 1 45.07 ? O11 XKM 903 H 1 HETATM 41 O O20 XKM . . . JA 3 144.481 172.941 153.714 1 32.24 ? O20 XKM 903 H 1 HETATM 42 S S26 XKM . . . JA 3 150.1 170.261 154.483 1 42.37 ? S26 XKM 903 H 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 82 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 42 #