data_9BUR
#
_model_server_result.job_id            vnOWS6sWwVk27WKZdn9s4g 
_model_server_result.datetime_utc      '2025-03-13 21:42:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9bur 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1204}' 
#
_entry.id    9BUR 
#
_exptl.entry_id    9BUR 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_pdbx_entity_branch.entity_id    3 
_pdbx_entity_branch.type         oligosaccharide 
#
_pdbx_entity_branch_link.link_id                     1 
_pdbx_entity_branch_link.details                     ? 
_pdbx_entity_branch_link.entity_id                   3 
_pdbx_entity_branch_link.entity_branch_list_num_1    2 
_pdbx_entity_branch_link.entity_branch_list_num_2    1 
_pdbx_entity_branch_link.comp_id_1                   NAG 
_pdbx_entity_branch_link.comp_id_2                   NAG 
_pdbx_entity_branch_link.atom_id_1                   C1 
_pdbx_entity_branch_link.leaving_atom_id_1           O1 
_pdbx_entity_branch_link.atom_stereo_config_1        . 
_pdbx_entity_branch_link.atom_id_2                   O4 
_pdbx_entity_branch_link.leaving_atom_id_2           HO4 
_pdbx_entity_branch_link.atom_stereo_config_2        . 
_pdbx_entity_branch_link.value_order                 sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
3 n C NAG 1 d 1 NAG d 1 NAG 
3 n C NAG 2 d 2 NAG d 2 NAG 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 99 A CYS 99 1_555 A SG CYS 450 A CYS 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
covale ? covale1 A ND2 ASN 550 A ASN 550 1_555 D C1 NAG . A NAG 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale2 A ND2 ASN 570 A ASN 570 1_555 C C1 NAG . d NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale3 A ND2 ASN 605 A ASN 605 1_555 E C1 NAG . A NAG 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale4 C O4 NAG . d NAG 1 1_555 C C1 NAG . d NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                POV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     POPC 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N C12 POV sing 365 n n 
N C13 POV sing 366 n n 
N C14 POV sing 367 n n 
N C15 POV sing 368 n n 
P O11 POV sing 369 n n 
P O12 POV sing 370 n n 
P O13 POV sing 371 n n 
P O14 POV doub 372 n n 
C1 C2 POV sing 373 n n 
C1 O11 POV sing 374 n n 
C1 H1 POV sing 375 n n 
C1 H1A POV sing 376 n n 
C2 C3 POV sing 377 n n 
C2 O21 POV sing 378 n n 
C2 H2 POV sing 379 n n 
C3 O31 POV sing 380 n n 
C3 H3 POV sing 381 n n 
C3 H3A POV sing 382 n n 
C210 C211 POV sing 383 n n 
C210 C29 POV doub 384 z n 
C210 H210 POV sing 385 n n 
C310 C311 POV sing 386 n n 
C310 C39 POV sing 387 n n 
C310 H310 POV sing 388 n n 
C310 H31A POV sing 389 n n 
C11 C12 POV sing 390 n n 
C11 O12 POV sing 391 n n 
C11 H11 POV sing 392 n n 
C11 H11A POV sing 393 n n 
C211 C212 POV sing 394 n n 
C211 H211 POV sing 395 n n 
C211 H21A POV sing 396 n n 
C311 C312 POV sing 397 n n 
C311 H311 POV sing 398 n n 
C311 H31B POV sing 399 n n 
C12 H12 POV sing 400 n n 
C12 H12A POV sing 401 n n 
C212 C213 POV sing 402 n n 
C212 H212 POV sing 403 n n 
C212 H21B POV sing 404 n n 
C312 C313 POV sing 405 n n 
C312 H312 POV sing 406 n n 
C312 H31C POV sing 407 n n 
C13 H13 POV sing 408 n n 
C13 H13A POV sing 409 n n 
C13 H13B POV sing 410 n n 
C213 C214 POV sing 411 n n 
C213 H213 POV sing 412 n n 
C213 H21C POV sing 413 n n 
C313 C314 POV sing 414 n n 
C313 H313 POV sing 415 n n 
C313 H31D POV sing 416 n n 
C14 H14 POV sing 417 n n 
C14 H14A POV sing 418 n n 
C14 H14B POV sing 419 n n 
C214 C215 POV sing 420 n n 
C214 H214 POV sing 421 n n 
C214 H21D POV sing 422 n n 
C314 C315 POV sing 423 n n 
C314 H314 POV sing 424 n n 
C314 H31E POV sing 425 n n 
C15 H15 POV sing 426 n n 
C15 H15A POV sing 427 n n 
C15 H15B POV sing 428 n n 
C215 C216 POV sing 429 n n 
C215 H215 POV sing 430 n n 
C215 H21E POV sing 431 n n 
C315 C316 POV sing 432 n n 
C315 H315 POV sing 433 n n 
C315 H31F POV sing 434 n n 
C216 C217 POV sing 435 n n 
C216 H216 POV sing 436 n n 
C216 H21F POV sing 437 n n 
C316 H316 POV sing 438 n n 
C316 H31G POV sing 439 n n 
C316 H31H POV sing 440 n n 
C217 C218 POV sing 441 n n 
C217 H217 POV sing 442 n n 
C217 H21G POV sing 443 n n 
C218 H218 POV sing 444 n n 
C218 H21H POV sing 445 n n 
C218 H21J POV sing 446 n n 
C21 O21 POV sing 447 n n 
C21 C22 POV sing 448 n n 
C21 O22 POV doub 449 n n 
C22 C23 POV sing 450 n n 
C22 H22 POV sing 451 n n 
C22 H22A POV sing 452 n n 
C23 C24 POV sing 453 n n 
C23 H23 POV sing 454 n n 
C23 H23A POV sing 455 n n 
C24 C25 POV sing 456 n n 
C24 H24 POV sing 457 n n 
C24 H24A POV sing 458 n n 
C25 C26 POV sing 459 n n 
C25 H25 POV sing 460 n n 
C25 H25A POV sing 461 n n 
C26 C27 POV sing 462 n n 
C26 H26 POV sing 463 n n 
C26 H26A POV sing 464 n n 
C27 C28 POV sing 465 n n 
C27 H27 POV sing 466 n n 
C27 H27A POV sing 467 n n 
C28 C29 POV sing 468 n n 
C28 H28 POV sing 469 n n 
C28 H28A POV sing 470 n n 
C29 H29 POV sing 471 n n 
C31 O31 POV sing 472 n n 
C31 C32 POV sing 473 n n 
C31 O32 POV doub 474 n n 
C32 C33 POV sing 475 n n 
C32 H32 POV sing 476 n n 
C32 H32A POV sing 477 n n 
C33 C34 POV sing 478 n n 
C33 H33 POV sing 479 n n 
C33 H33A POV sing 480 n n 
C34 C35 POV sing 481 n n 
C34 H34 POV sing 482 n n 
C34 H34A POV sing 483 n n 
C35 C36 POV sing 484 n n 
C35 H35 POV sing 485 n n 
C35 H35A POV sing 486 n n 
C36 C37 POV sing 487 n n 
C36 H36 POV sing 488 n n 
C36 H36A POV sing 489 n n 
C37 C38 POV sing 490 n n 
C37 H37 POV sing 491 n n 
C37 H37A POV sing 492 n n 
C38 C39 POV sing 493 n n 
C38 H38 POV sing 494 n n 
C38 H38A POV sing 495 n n 
C39 H39 POV sing 496 n n 
C39 H39A POV sing 497 n n 
#
_atom_sites.entry_id                     9BUR 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 NAG A 1 1201 1201 NAG NAG . 
E 4 NAG A 1 1202 1301 NAG NAG . 
F 5 CLR A 1 1203 801 CLR CLR . 
G 6 POV A 1 1204 1001 POV POV . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N POV . . . G 6 99.446 131.848 124.613 1 53.62 ? N POV 1204 A 1 
HETATM 2 P P POV . . . G 6 103.013 132.588 127.423 1 53.62 ? P POV 1204 A 1 
HETATM 3 C C1 POV . . . G 6 104.731 134.259 126.376 1 53.62 ? C1 POV 1204 A 1 
HETATM 4 C C2 POV . . . G 6 106.155 134.095 125.868 1 53.62 ? C2 POV 1204 A 1 
HETATM 5 C C3 POV . . . G 6 106.967 135.296 126.323 1 53.62 ? C3 POV 1204 A 1 
HETATM 6 C C210 POV . . . G 6 104.885 136.067 116.141 1 53.62 ? C210 POV 1204 A 1 
HETATM 7 C C11 POV . . . G 6 101.32 133.182 125.514 1 53.62 ? C11 POV 1204 A 1 
HETATM 8 O O11 POV . . . G 6 104.475 133.346 127.403 1 53.62 ? O11 POV 1204 A 1 
HETATM 9 C C211 POV . . . G 6 103.636 136.619 115.458 1 53.62 ? C211 POV 1204 A 1 
HETATM 10 C C12 POV . . . G 6 100.065 132.369 125.817 1 53.62 ? C12 POV 1204 A 1 
HETATM 11 O O12 POV . . . G 6 102.46 132.47 125.885 1 53.62 ? O12 POV 1204 A 1 
HETATM 12 C C13 POV . . . G 6 100.347 130.933 123.937 1 53.62 ? C13 POV 1204 A 1 
HETATM 13 O O13 POV . . . G 6 102.063 133.255 128.302 1 53.62 ? O13 POV 1204 A 1 
HETATM 14 C C14 POV . . . G 6 99.073 132.916 123.711 1 53.62 ? C14 POV 1204 A 1 
HETATM 15 O O14 POV . . . G 6 103.068 131.276 128.051 1 53.62 ? O14 POV 1204 A 1 
HETATM 16 C C15 POV . . . G 6 98.244 131.138 124.999 1 53.62 ? C15 POV 1204 A 1 
HETATM 17 C C21 POV . . . G 6 106.56 132.849 123.925 1 53.62 ? C21 POV 1204 A 1 
HETATM 18 O O21 POV . . . G 6 106.148 134.064 124.473 1 53.62 ? O21 POV 1204 A 1 
HETATM 19 C C22 POV . . . G 6 107.614 132.823 122.824 1 53.62 ? C22 POV 1204 A 1 
HETATM 20 O O22 POV . . . G 6 106.091 131.836 124.313 1 53.62 ? O22 POV 1204 A 1 
HETATM 21 C C23 POV . . . G 6 107.299 131.683 121.863 1 53.62 ? C23 POV 1204 A 1 
HETATM 22 C C24 POV . . . G 6 108.112 131.853 120.584 1 53.62 ? C24 POV 1204 A 1 
HETATM 23 C C25 POV . . . G 6 107.226 131.5 119.392 1 53.62 ? C25 POV 1204 A 1 
HETATM 24 C C26 POV . . . G 6 107.424 132.544 118.297 1 53.62 ? C26 POV 1204 A 1 
HETATM 25 C C27 POV . . . G 6 106.111 132.759 117.547 1 53.62 ? C27 POV 1204 A 1 
HETATM 26 C C28 POV . . . G 6 106.247 133.997 116.662 1 53.62 ? C28 POV 1204 A 1 
HETATM 27 C C29 POV . . . G 6 104.868 134.547 116.306 1 53.62 ? C29 POV 1204 A 1 
HETATM 28 C C31 POV . . . G 6 108.396 136.95 125.501 1 53.62 ? C31 POV 1204 A 1 
HETATM 29 O O31 POV . . . G 6 107.404 136.014 125.21 1 53.62 ? O31 POV 1204 A 1 
HETATM 30 C C32 POV . . . G 6 108.588 138.176 124.621 1 53.62 ? C32 POV 1204 A 1 
HETATM 31 O O32 POV . . . G 6 109.091 136.799 126.442 1 53.62 ? O32 POV 1204 A 1 
HETATM 32 C C33 POV . . . G 6 109.448 137.818 123.418 1 53.62 ? C33 POV 1204 A 1 
HETATM 33 C C34 POV . . . G 6 110.912 137.738 123.831 1 53.62 ? C34 POV 1204 A 1 
HETATM 34 C C35 POV . . . G 6 111.673 136.902 122.808 1 53.62 ? C35 POV 1204 A 1 
HETATM 35 C C36 POV . . . G 6 111.194 135.455 122.873 1 53.62 ? C36 POV 1204 A 1 
HETATM 36 C C37 POV . . . G 6 111.255 134.838 121.481 1 53.62 ? C37 POV 1204 A 1 
HETATM 37 C C38 POV . . . G 6 110.287 135.564 120.553 1 53.62 ? C38 POV 1204 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           323 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           37 
#