data_9BWS # _model_server_result.job_id MDlBa4E6NPKHbiHpcd33xQ _model_server_result.datetime_utc '2025-09-04 09:50:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9bws # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":405}' # _entry.id 9BWS # _exptl.entry_id 9BWS _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 114.229 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-OCTANE _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9BWS _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9BWS _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 J N N ? 4 K N N ? 4 M N N ? 4 P N N ? 4 Q N N ? 4 S N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O THR 110 U THR 110 1_555 L K K . U K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.802 ? metalc ? metalc2 A O THR 110 U THR 110 1_555 W K K . A K 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.406 ? metalc ? metalc3 A O ILE 111 U ILE 111 1_555 W K K . A K 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.637 ? metalc ? metalc4 A O ILE 111 U ILE 111 1_555 X K K . A K 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? metalc ? metalc5 A O GLY 112 U GLY 112 1_555 V K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.948 ? metalc ? metalc6 A O GLY 112 U GLY 112 1_555 X K K . A K 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? metalc ? metalc7 A O PHE 113 U PHE 113 1_555 V K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.098 ? metalc ? metalc8 A O THR 237 U THR 237 1_555 L K K . U K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? metalc ? metalc9 A OG1 THR 237 U THR 237 1_555 L K K . U K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.405 ? metalc ? metalc10 A O THR 237 U THR 237 1_555 W K K . A K 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.157 ? metalc ? metalc11 A O ILE 238 U ILE 238 1_555 W K K . A K 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.76 ? metalc ? metalc12 A O ILE 238 U ILE 238 1_555 X K K . A K 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.928 ? metalc ? metalc13 A O GLY 239 U GLY 239 1_555 V K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? metalc ? metalc14 A O GLY 239 U GLY 239 1_555 X K K . A K 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? metalc ? metalc15 A O PHE 240 U PHE 240 1_555 V K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.168 ? metalc ? metalc16 L K K . U K 410 1_555 B O THR 110 A THR 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.872 ? metalc ? metalc17 L K K . U K 410 1_555 B O THR 237 A THR 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.85 ? metalc ? metalc18 B O THR 110 A THR 110 1_555 W K K . A K 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.457 ? metalc ? metalc19 B O ILE 111 A ILE 111 1_555 W K K . A K 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? metalc ? metalc20 B O ILE 111 A ILE 111 1_555 X K K . A K 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.979 ? metalc ? metalc21 B O GLY 112 A GLY 112 1_555 V K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.009 ? metalc ? metalc22 B O GLY 112 A GLY 112 1_555 X K K . A K 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.046 ? metalc ? metalc23 B O PHE 113 A PHE 113 1_555 V K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.146 ? metalc ? metalc24 B O THR 237 A THR 237 1_555 W K K . A K 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.192 ? metalc ? metalc25 B O ILE 238 A ILE 238 1_555 W K K . A K 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.775 ? metalc ? metalc26 B O ILE 238 A ILE 238 1_555 X K K . A K 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.965 ? metalc ? metalc27 B O GLY 239 A GLY 239 1_555 V K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.837 ? metalc ? metalc28 B O GLY 239 A GLY 239 1_555 X K K . A K 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.832 ? metalc ? metalc29 B O PHE 240 A PHE 240 1_555 V K K . A K 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.243 ? # _chem_comp.formula 'C8 H18' _chem_comp.formula_weight 114.229 _chem_comp.id OCT _chem_comp.mon_nstd_flag . _chem_comp.name N-OCTANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 OCT sing 373 n n C1 H11 OCT sing 374 n n C1 H12 OCT sing 375 n n C1 H13 OCT sing 376 n n C2 C3 OCT sing 377 n n C2 H21 OCT sing 378 n n C2 H22 OCT sing 379 n n C3 C4 OCT sing 380 n n C3 H31 OCT sing 381 n n C3 H32 OCT sing 382 n n C4 C5 OCT sing 383 n n C4 H41 OCT sing 384 n n C4 H42 OCT sing 385 n n C5 C6 OCT sing 386 n n C5 H51 OCT sing 387 n n C5 H52 OCT sing 388 n n C6 C7 OCT sing 389 n n C6 H61 OCT sing 390 n n C6 H62 OCT sing 391 n n C7 C8 OCT sing 392 n n C7 H71 OCT sing 393 n n C7 H72 OCT sing 394 n n C8 H81 OCT sing 395 n n C8 H82 OCT sing 396 n n C8 H83 OCT sing 397 n n # _atom_sites.entry_id 9BWS _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 D12 U 1 401 302 D12 D12 . D 3 D10 U 1 402 303 D10 D10 . E 4 OCT U 1 403 304 OCT D08 . F 4 OCT U 1 404 306 OCT D08 . G 3 D10 U 1 405 307 D10 D10 . H 5 HEX U 1 406 308 HEX D06 . I 6 EIC U 1 407 309 EIC EIC . J 4 OCT U 1 408 304 OCT D08 . K 4 OCT U 1 409 308 OCT D08 . L 7 K U 1 410 3 K K . M 4 OCT A 1 401 305 OCT D08 . N 2 D12 A 1 402 302 D12 D12 . O 3 D10 A 1 403 303 D10 D10 . P 4 OCT A 1 404 305 OCT D08 . Q 4 OCT A 1 405 306 OCT D08 . R 3 D10 A 1 406 307 D10 D10 . S 4 OCT A 1 407 309 OCT D08 . T 5 HEX A 1 408 310 HEX D06 . U 6 EIC A 1 409 311 EIC EIC . V 7 K A 1 410 1 K K . W 7 K A 1 411 2 K K . X 7 K A 1 412 4 K K . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OCT . . . Q 4 104.99 95.347 110.837 1 20 ? C1 OCT 405 A 1 HETATM 2 C C2 OCT . . . Q 4 105.576 94.746 112.099 1 20 ? C2 OCT 405 A 1 HETATM 3 C C3 OCT . . . Q 4 105.534 95.725 113.253 1 20 ? C3 OCT 405 A 1 HETATM 4 C C4 OCT . . . Q 4 106.646 95.383 114.217 1 20 ? C4 OCT 405 A 1 HETATM 5 C C5 OCT . . . Q 4 106.602 96.295 115.42 1 20 ? C5 OCT 405 A 1 HETATM 6 C C6 OCT . . . Q 4 105.733 95.758 116.54 1 20 ? C6 OCT 405 A 1 HETATM 7 C C7 OCT . . . Q 4 106.507 95.741 117.842 1 20 ? C7 OCT 405 A 1 HETATM 8 C C8 OCT . . . Q 4 105.576 95.853 119.034 1 20 ? C8 OCT 405 A 1 HETATM 9 H H11 OCT . . . Q 4 104.054 95.832 111.08 1 20 ? H11 OCT 405 A 1 HETATM 10 H H12 OCT . . . Q 4 105.683 96.076 110.435 1 20 ? H12 OCT 405 A 1 HETATM 11 H H13 OCT . . . Q 4 104.818 94.563 110.11 1 20 ? H13 OCT 405 A 1 HETATM 12 H H21 OCT . . . Q 4 106.606 94.472 111.914 1 20 ? H21 OCT 405 A 1 HETATM 13 H H22 OCT . . . Q 4 105.014 93.863 112.365 1 20 ? H22 OCT 405 A 1 HETATM 14 H H31 OCT . . . Q 4 105.672 96.728 112.878 1 20 ? H31 OCT 405 A 1 HETATM 15 H H32 OCT . . . Q 4 104.581 95.647 113.761 1 20 ? H32 OCT 405 A 1 HETATM 16 H H41 OCT . . . Q 4 106.539 94.355 114.532 1 20 ? H41 OCT 405 A 1 HETATM 17 H H42 OCT . . . Q 4 107.595 95.507 113.713 1 20 ? H42 OCT 405 A 1 HETATM 18 H H51 OCT . . . Q 4 106.21 97.255 115.106 1 20 ? H51 OCT 405 A 1 HETATM 19 H H52 OCT . . . Q 4 107.609 96.424 115.788 1 20 ? H52 OCT 405 A 1 HETATM 20 H H61 OCT . . . Q 4 104.866 96.394 116.655 1 20 ? H61 OCT 405 A 1 HETATM 21 H H62 OCT . . . Q 4 105.411 94.755 116.301 1 20 ? H62 OCT 405 A 1 HETATM 22 H H71 OCT . . . Q 4 107.065 94.815 117.909 1 20 ? H71 OCT 405 A 1 HETATM 23 H H72 OCT . . . Q 4 107.193 96.578 117.861 1 20 ? H72 OCT 405 A 1 HETATM 24 H H81 OCT . . . Q 4 104.635 95.375 118.792 1 20 ? H81 OCT 405 A 1 HETATM 25 H H82 OCT . . . Q 4 106.024 95.364 119.89 1 20 ? H82 OCT 405 A 1 HETATM 26 H H83 OCT . . . Q 4 105.404 96.898 119.256 1 20 ? H83 OCT 405 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #