data_9BXL # _model_server_result.job_id oCAuZpFirkaf28ZNtmNSYA _model_server_result.datetime_utc '2025-02-05 20:10:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9bxl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":302}' # _entry.id 9BXL # _exptl.entry_id 9BXL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9BXL _cell.length_a 70.16 _cell.length_b 92.215 _cell.length_c 95.999 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9BXL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,H,I,K 1 1 A,C,D,E,F,G,J 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1/2,-y,z+1/2 -1 0 0 0 -1 0 0 0 1 -35.08 0 47.9995 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 I N N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 394 n n C C2 TRS sing 395 n n C C3 TRS sing 396 n n C N TRS sing 397 n n C1 O1 TRS sing 398 n n C1 H11 TRS sing 399 n n C1 H12 TRS sing 400 n n C2 O2 TRS sing 401 n n C2 H21 TRS sing 402 n n C2 H22 TRS sing 403 n n C3 O3 TRS sing 404 n n C3 H31 TRS sing 405 n n C3 H32 TRS sing 406 n n N HN1 TRS sing 407 n n N HN2 TRS sing 408 n n N HN3 TRS sing 409 n n O1 HO1 TRS sing 410 n n O2 HO2 TRS sing 411 n n O3 HO3 TRS sing 412 n n # _atom_sites.entry_id 9BXL _atom_sites.fract_transf_matrix[1][1] 0.014253 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010844 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010417 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAM A 1 301 281 SAM SAM . D 3 TRS A 1 302 282 TRS TRS . E 4 EDO A 1 303 283 EDO EDO . F 4 EDO A 1 304 284 EDO EDO . G 4 EDO A 1 305 285 EDO EDO . H 2 SAM B 1 301 261 SAM SAM . I 3 TRS B 1 302 262 TRS TRS . J 5 HOH A 1 401 148 HOH HOH . J 5 HOH A 2 402 5 HOH HOH . J 5 HOH A 3 403 83 HOH HOH . J 5 HOH A 4 404 81 HOH HOH . J 5 HOH A 5 405 22 HOH HOH . J 5 HOH A 6 406 98 HOH HOH . J 5 HOH A 7 407 76 HOH HOH . J 5 HOH A 8 408 231 HOH HOH . J 5 HOH A 9 409 198 HOH HOH . J 5 HOH A 10 410 193 HOH HOH . J 5 HOH A 11 411 251 HOH HOH . J 5 HOH A 12 412 108 HOH HOH . J 5 HOH A 13 413 16 HOH HOH . J 5 HOH A 14 414 119 HOH HOH . J 5 HOH A 15 415 52 HOH HOH . J 5 HOH A 16 416 2 HOH HOH . J 5 HOH A 17 417 258 HOH HOH . J 5 HOH A 18 418 57 HOH HOH . J 5 HOH A 19 419 15 HOH HOH . J 5 HOH A 20 420 29 HOH HOH . J 5 HOH A 21 421 11 HOH HOH . J 5 HOH A 22 422 47 HOH HOH . J 5 HOH A 23 423 9 HOH HOH . J 5 HOH A 24 424 290 HOH HOH . J 5 HOH A 25 425 260 HOH HOH . J 5 HOH A 26 426 18 HOH HOH . J 5 HOH A 27 427 21 HOH HOH . J 5 HOH A 28 428 181 HOH HOH . J 5 HOH A 29 429 25 HOH HOH . J 5 HOH A 30 430 36 HOH HOH . J 5 HOH A 31 431 49 HOH HOH . J 5 HOH A 32 432 113 HOH HOH . J 5 HOH A 33 433 7 HOH HOH . J 5 HOH A 34 434 8 HOH HOH . J 5 HOH A 35 435 255 HOH HOH . J 5 HOH A 36 436 96 HOH HOH . J 5 HOH A 37 437 278 HOH HOH . J 5 HOH A 38 438 185 HOH HOH . J 5 HOH A 39 439 69 HOH HOH . J 5 HOH A 40 440 342 HOH HOH . J 5 HOH A 41 441 347 HOH HOH . J 5 HOH A 42 442 196 HOH HOH . J 5 HOH A 43 443 190 HOH HOH . J 5 HOH A 44 444 138 HOH HOH . J 5 HOH A 45 445 46 HOH HOH . J 5 HOH A 46 446 50 HOH HOH . J 5 HOH A 47 447 59 HOH HOH . J 5 HOH A 48 448 14 HOH HOH . J 5 HOH A 49 449 147 HOH HOH . J 5 HOH A 50 450 86 HOH HOH . J 5 HOH A 51 451 126 HOH HOH . J 5 HOH A 52 452 150 HOH HOH . J 5 HOH A 53 453 171 HOH HOH . J 5 HOH A 54 454 24 HOH HOH . J 5 HOH A 55 455 45 HOH HOH . J 5 HOH A 56 456 12 HOH HOH . J 5 HOH A 57 457 145 HOH HOH . J 5 HOH A 58 458 177 HOH HOH . J 5 HOH A 59 459 84 HOH HOH . J 5 HOH A 60 460 206 HOH HOH . J 5 HOH A 61 461 136 HOH HOH . J 5 HOH A 62 462 156 HOH HOH . J 5 HOH A 63 463 121 HOH HOH . J 5 HOH A 64 464 97 HOH HOH . J 5 HOH A 65 465 227 HOH HOH . J 5 HOH A 66 466 214 HOH HOH . J 5 HOH A 67 467 259 HOH HOH . J 5 HOH A 68 468 102 HOH HOH . J 5 HOH A 69 469 56 HOH HOH . J 5 HOH A 70 470 32 HOH HOH . J 5 HOH A 71 471 201 HOH HOH . J 5 HOH A 72 472 60 HOH HOH . J 5 HOH A 73 473 63 HOH HOH . J 5 HOH A 74 474 120 HOH HOH . J 5 HOH A 75 475 336 HOH HOH . J 5 HOH A 76 476 318 HOH HOH . J 5 HOH A 77 477 27 HOH HOH . J 5 HOH A 78 478 64 HOH HOH . J 5 HOH A 79 479 51 HOH HOH . J 5 HOH A 80 480 354 HOH HOH . J 5 HOH A 81 481 170 HOH HOH . J 5 HOH A 82 482 162 HOH HOH . J 5 HOH A 83 483 99 HOH HOH . J 5 HOH A 84 484 182 HOH HOH . J 5 HOH A 85 485 204 HOH HOH . J 5 HOH A 86 486 207 HOH HOH . J 5 HOH A 87 487 30 HOH HOH . J 5 HOH A 88 488 155 HOH HOH . J 5 HOH A 89 489 186 HOH HOH . J 5 HOH A 90 490 266 HOH HOH . J 5 HOH A 91 491 137 HOH HOH . J 5 HOH A 92 492 176 HOH HOH . J 5 HOH A 93 493 213 HOH HOH . J 5 HOH A 94 494 245 HOH HOH . J 5 HOH A 95 495 275 HOH HOH . J 5 HOH A 96 496 263 HOH HOH . J 5 HOH A 97 497 133 HOH HOH . J 5 HOH A 98 498 247 HOH HOH . J 5 HOH A 99 499 111 HOH HOH . J 5 HOH A 100 500 141 HOH HOH . J 5 HOH A 101 501 361 HOH HOH . J 5 HOH A 102 502 337 HOH HOH . J 5 HOH A 103 503 280 HOH HOH . J 5 HOH A 104 504 200 HOH HOH . J 5 HOH A 105 505 122 HOH HOH . J 5 HOH A 106 506 257 HOH HOH . J 5 HOH A 107 507 298 HOH HOH . J 5 HOH A 108 508 344 HOH HOH . J 5 HOH A 109 509 224 HOH HOH . J 5 HOH A 110 510 284 HOH HOH . J 5 HOH A 111 511 248 HOH HOH . J 5 HOH A 112 512 68 HOH HOH . J 5 HOH A 113 513 345 HOH HOH . J 5 HOH A 114 514 349 HOH HOH . J 5 HOH A 115 515 238 HOH HOH . J 5 HOH A 116 516 335 HOH HOH . J 5 HOH A 117 517 297 HOH HOH . J 5 HOH A 118 518 355 HOH HOH . J 5 HOH A 119 519 211 HOH HOH . J 5 HOH A 120 520 301 HOH HOH . J 5 HOH A 121 521 179 HOH HOH . J 5 HOH A 122 522 292 HOH HOH . J 5 HOH A 123 523 80 HOH HOH . J 5 HOH A 124 524 334 HOH HOH . J 5 HOH A 125 525 363 HOH HOH . J 5 HOH A 126 526 233 HOH HOH . J 5 HOH A 127 527 262 HOH HOH . J 5 HOH A 128 528 174 HOH HOH . J 5 HOH A 129 529 350 HOH HOH . J 5 HOH A 130 530 333 HOH HOH . J 5 HOH A 131 531 346 HOH HOH . J 5 HOH A 132 532 77 HOH HOH . J 5 HOH A 133 533 302 HOH HOH . J 5 HOH A 134 534 220 HOH HOH . J 5 HOH A 135 535 246 HOH HOH . K 5 HOH B 1 401 115 HOH HOH . K 5 HOH B 2 402 208 HOH HOH . K 5 HOH B 3 403 158 HOH HOH . K 5 HOH B 4 404 103 HOH HOH . K 5 HOH B 5 405 4 HOH HOH . K 5 HOH B 6 406 116 HOH HOH . K 5 HOH B 7 407 142 HOH HOH . K 5 HOH B 8 408 73 HOH HOH . K 5 HOH B 9 409 239 HOH HOH . K 5 HOH B 10 410 183 HOH HOH . K 5 HOH B 11 411 44 HOH HOH . K 5 HOH B 12 412 35 HOH HOH . K 5 HOH B 13 413 67 HOH HOH . K 5 HOH B 14 414 92 HOH HOH . K 5 HOH B 15 415 3 HOH HOH . K 5 HOH B 16 416 134 HOH HOH . K 5 HOH B 17 417 40 HOH HOH . K 5 HOH B 18 418 13 HOH HOH . K 5 HOH B 19 419 104 HOH HOH . K 5 HOH B 20 420 124 HOH HOH . K 5 HOH B 21 421 1 HOH HOH . K 5 HOH B 22 422 112 HOH HOH . K 5 HOH B 23 423 125 HOH HOH . K 5 HOH B 24 424 28 HOH HOH . K 5 HOH B 25 425 55 HOH HOH . K 5 HOH B 26 426 161 HOH HOH . K 5 HOH B 27 427 210 HOH HOH . K 5 HOH B 28 428 75 HOH HOH . K 5 HOH B 29 429 90 HOH HOH . K 5 HOH B 30 430 209 HOH HOH . K 5 HOH B 31 431 267 HOH HOH . K 5 HOH B 32 432 20 HOH HOH . K 5 HOH B 33 433 95 HOH HOH . K 5 HOH B 34 434 127 HOH HOH . K 5 HOH B 35 435 222 HOH HOH . K 5 HOH B 36 436 65 HOH HOH . K 5 HOH B 37 437 271 HOH HOH . K 5 HOH B 38 438 6 HOH HOH . K 5 HOH B 39 439 128 HOH HOH . K 5 HOH B 40 440 140 HOH HOH . K 5 HOH B 41 441 195 HOH HOH . K 5 HOH B 42 442 33 HOH HOH . K 5 HOH B 43 443 129 HOH HOH . K 5 HOH B 44 444 243 HOH HOH . K 5 HOH B 45 445 10 HOH HOH . K 5 HOH B 46 446 107 HOH HOH . K 5 HOH B 47 447 241 HOH HOH . K 5 HOH B 48 448 38 HOH HOH . K 5 HOH B 49 449 41 HOH HOH . K 5 HOH B 50 450 135 HOH HOH . K 5 HOH B 51 451 139 HOH HOH . K 5 HOH B 52 452 314 HOH HOH . K 5 HOH B 53 453 17 HOH HOH . K 5 HOH B 54 454 202 HOH HOH . K 5 HOH B 55 455 23 HOH HOH . K 5 HOH B 56 456 228 HOH HOH . K 5 HOH B 57 457 42 HOH HOH . K 5 HOH B 58 458 53 HOH HOH . K 5 HOH B 59 459 194 HOH HOH . K 5 HOH B 60 460 87 HOH HOH . K 5 HOH B 61 461 169 HOH HOH . K 5 HOH B 62 462 48 HOH HOH . K 5 HOH B 63 463 105 HOH HOH . K 5 HOH B 64 464 131 HOH HOH . K 5 HOH B 65 465 157 HOH HOH . K 5 HOH B 66 466 66 HOH HOH . K 5 HOH B 67 467 39 HOH HOH . K 5 HOH B 68 468 160 HOH HOH . K 5 HOH B 69 469 54 HOH HOH . K 5 HOH B 70 470 217 HOH HOH . K 5 HOH B 71 471 43 HOH HOH . K 5 HOH B 72 472 117 HOH HOH . K 5 HOH B 73 473 26 HOH HOH . K 5 HOH B 74 474 268 HOH HOH . K 5 HOH B 75 475 197 HOH HOH . K 5 HOH B 76 476 31 HOH HOH . K 5 HOH B 77 477 153 HOH HOH . K 5 HOH B 78 478 163 HOH HOH . K 5 HOH B 79 479 143 HOH HOH . K 5 HOH B 80 480 272 HOH HOH . K 5 HOH B 81 481 62 HOH HOH . K 5 HOH B 82 482 173 HOH HOH . K 5 HOH B 83 483 166 HOH HOH . K 5 HOH B 84 484 265 HOH HOH . K 5 HOH B 85 485 339 HOH HOH . K 5 HOH B 86 486 71 HOH HOH . K 5 HOH B 87 487 168 HOH HOH . K 5 HOH B 88 488 178 HOH HOH . K 5 HOH B 89 489 151 HOH HOH . K 5 HOH B 90 490 88 HOH HOH . K 5 HOH B 91 491 261 HOH HOH . K 5 HOH B 92 492 180 HOH HOH . K 5 HOH B 93 493 93 HOH HOH . K 5 HOH B 94 494 167 HOH HOH . K 5 HOH B 95 495 270 HOH HOH . K 5 HOH B 96 496 91 HOH HOH . K 5 HOH B 97 497 212 HOH HOH . K 5 HOH B 98 498 244 HOH HOH . K 5 HOH B 99 499 226 HOH HOH . K 5 HOH B 100 500 72 HOH HOH . K 5 HOH B 101 501 144 HOH HOH . K 5 HOH B 102 502 37 HOH HOH . K 5 HOH B 103 503 191 HOH HOH . K 5 HOH B 104 504 118 HOH HOH . K 5 HOH B 105 505 152 HOH HOH . K 5 HOH B 106 506 101 HOH HOH . K 5 HOH B 107 507 94 HOH HOH . K 5 HOH B 108 508 192 HOH HOH . K 5 HOH B 109 509 288 HOH HOH . K 5 HOH B 110 510 189 HOH HOH . K 5 HOH B 111 511 184 HOH HOH . K 5 HOH B 112 512 250 HOH HOH . K 5 HOH B 113 513 274 HOH HOH . K 5 HOH B 114 514 58 HOH HOH . K 5 HOH B 115 515 359 HOH HOH . K 5 HOH B 116 516 109 HOH HOH . K 5 HOH B 117 517 187 HOH HOH . K 5 HOH B 118 518 205 HOH HOH . K 5 HOH B 119 519 312 HOH HOH . K 5 HOH B 120 520 351 HOH HOH . K 5 HOH B 121 521 89 HOH HOH . K 5 HOH B 122 522 338 HOH HOH . K 5 HOH B 123 523 223 HOH HOH . K 5 HOH B 124 524 123 HOH HOH . K 5 HOH B 125 525 100 HOH HOH . K 5 HOH B 126 526 353 HOH HOH . K 5 HOH B 127 527 277 HOH HOH . K 5 HOH B 128 528 175 HOH HOH . K 5 HOH B 129 529 242 HOH HOH . K 5 HOH B 130 530 188 HOH HOH . K 5 HOH B 131 531 85 HOH HOH . K 5 HOH B 132 532 254 HOH HOH . K 5 HOH B 133 533 253 HOH HOH . K 5 HOH B 134 534 132 HOH HOH . K 5 HOH B 135 535 285 HOH HOH . K 5 HOH B 136 536 78 HOH HOH . K 5 HOH B 137 537 343 HOH HOH . K 5 HOH B 138 538 216 HOH HOH . K 5 HOH B 139 539 110 HOH HOH . K 5 HOH B 140 540 289 HOH HOH . K 5 HOH B 141 541 70 HOH HOH . K 5 HOH B 142 542 340 HOH HOH . K 5 HOH B 143 543 348 HOH HOH . K 5 HOH B 144 544 356 HOH HOH . K 5 HOH B 145 545 146 HOH HOH . K 5 HOH B 146 546 306 HOH HOH . K 5 HOH B 147 547 360 HOH HOH . K 5 HOH B 148 548 165 HOH HOH . K 5 HOH B 149 549 296 HOH HOH . K 5 HOH B 150 550 264 HOH HOH . K 5 HOH B 151 551 362 HOH HOH . K 5 HOH B 152 552 352 HOH HOH . K 5 HOH B 153 553 164 HOH HOH . K 5 HOH B 154 554 82 HOH HOH . K 5 HOH B 155 555 307 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . I 3 -29.466 4.062 51.618 1 43 ? C TRS 302 B 1 HETATM 2 C C1 TRS . . . I 3 -30.544 4.594 52.566 1 39.38 ? C1 TRS 302 B 1 HETATM 3 C C2 TRS . . . I 3 -28.161 4.822 51.823 1 40.82 ? C2 TRS 302 B 1 HETATM 4 C C3 TRS . . . I 3 -29.917 4.166 50.155 1 41.44 ? C3 TRS 302 B 1 HETATM 5 N N TRS . . . I 3 -29.227 2.655 51.935 1 39.08 ? N TRS 302 B 1 HETATM 6 O O1 TRS . . . I 3 -30.08 4.673 53.902 1 40.81 ? O1 TRS 302 B 1 HETATM 7 O O2 TRS . . . I 3 -28.394 6.148 51.405 1 41.66 ? O2 TRS 302 B 1 HETATM 8 O O3 TRS . . . I 3 -28.898 3.737 49.265 1 42.36 ? O3 TRS 302 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #