data_9BZQ # _model_server_result.job_id gYHbpzyNjLXlqR0h4-Mi-w _model_server_result.datetime_utc '2024-11-14 17:30:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9bzq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 9BZQ # _exptl.entry_id 9BZQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.17 _cell.angle_gamma 90 _cell.entry_id 9BZQ _cell.length_a 36.223 _cell.length_b 79.463 _cell.length_c 42.939 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9BZQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 47 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 80 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id CAN _struct_conn.ptnr2_label_comp_id NXL _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NXL _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.373 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 92 n n C O2 FMT sing 93 n n C H FMT sing 94 n n O2 HO2 FMT sing 95 n n # _atom_sites.entry_id 9BZQ _atom_sites.fract_transf_matrix[1][1] 0.027607 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009061 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012584 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024511 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NXL A 1 401 401 NXL NXL . C 3 SIN A 1 402 402 SIN SIN . D 4 FMT A 1 403 403 FMT FMT . E 5 EDO A 1 404 404 EDO EDO . F 6 HOH A 1 501 227 HOH HOH . F 6 HOH A 2 502 176 HOH HOH . F 6 HOH A 3 503 307 HOH HOH . F 6 HOH A 4 504 264 HOH HOH . F 6 HOH A 5 505 316 HOH HOH . F 6 HOH A 6 506 69 HOH HOH . F 6 HOH A 7 507 228 HOH HOH . F 6 HOH A 8 508 15 HOH HOH . F 6 HOH A 9 509 90 HOH HOH . F 6 HOH A 10 510 202 HOH HOH . F 6 HOH A 11 511 146 HOH HOH . F 6 HOH A 12 512 131 HOH HOH . F 6 HOH A 13 513 152 HOH HOH . F 6 HOH A 14 514 35 HOH HOH . F 6 HOH A 15 515 129 HOH HOH . F 6 HOH A 16 516 93 HOH HOH . F 6 HOH A 17 517 88 HOH HOH . F 6 HOH A 18 518 44 HOH HOH . F 6 HOH A 19 519 8 HOH HOH . F 6 HOH A 20 520 212 HOH HOH . F 6 HOH A 21 521 199 HOH HOH . F 6 HOH A 22 522 198 HOH HOH . F 6 HOH A 23 523 242 HOH HOH . F 6 HOH A 24 524 13 HOH HOH . F 6 HOH A 25 525 62 HOH HOH . F 6 HOH A 26 526 186 HOH HOH . F 6 HOH A 27 527 82 HOH HOH . F 6 HOH A 28 528 290 HOH HOH . F 6 HOH A 29 529 252 HOH HOH . F 6 HOH A 30 530 268 HOH HOH . F 6 HOH A 31 531 11 HOH HOH . F 6 HOH A 32 532 106 HOH HOH . F 6 HOH A 33 533 259 HOH HOH . F 6 HOH A 34 534 156 HOH HOH . F 6 HOH A 35 535 192 HOH HOH . F 6 HOH A 36 536 209 HOH HOH . F 6 HOH A 37 537 72 HOH HOH . F 6 HOH A 38 538 169 HOH HOH . F 6 HOH A 39 539 109 HOH HOH . F 6 HOH A 40 540 87 HOH HOH . F 6 HOH A 41 541 41 HOH HOH . F 6 HOH A 42 542 147 HOH HOH . F 6 HOH A 43 543 205 HOH HOH . F 6 HOH A 44 544 217 HOH HOH . F 6 HOH A 45 545 273 HOH HOH . F 6 HOH A 46 546 28 HOH HOH . F 6 HOH A 47 547 110 HOH HOH . F 6 HOH A 48 548 5 HOH HOH . F 6 HOH A 49 549 58 HOH HOH . F 6 HOH A 50 550 3 HOH HOH . F 6 HOH A 51 551 292 HOH HOH . F 6 HOH A 52 552 253 HOH HOH . F 6 HOH A 53 553 80 HOH HOH . F 6 HOH A 54 554 112 HOH HOH . F 6 HOH A 55 555 42 HOH HOH . F 6 HOH A 56 556 211 HOH HOH . F 6 HOH A 57 557 145 HOH HOH . F 6 HOH A 58 558 286 HOH HOH . F 6 HOH A 59 559 74 HOH HOH . F 6 HOH A 60 560 63 HOH HOH . F 6 HOH A 61 561 55 HOH HOH . F 6 HOH A 62 562 95 HOH HOH . F 6 HOH A 63 563 221 HOH HOH . F 6 HOH A 64 564 241 HOH HOH . F 6 HOH A 65 565 125 HOH HOH . F 6 HOH A 66 566 180 HOH HOH . F 6 HOH A 67 567 22 HOH HOH . F 6 HOH A 68 568 23 HOH HOH . F 6 HOH A 69 569 293 HOH HOH . F 6 HOH A 70 570 52 HOH HOH . F 6 HOH A 71 571 75 HOH HOH . F 6 HOH A 72 572 162 HOH HOH . F 6 HOH A 73 573 60 HOH HOH . F 6 HOH A 74 574 33 HOH HOH . F 6 HOH A 75 575 277 HOH HOH . F 6 HOH A 76 576 9 HOH HOH . F 6 HOH A 77 577 10 HOH HOH . F 6 HOH A 78 578 150 HOH HOH . F 6 HOH A 79 579 225 HOH HOH . F 6 HOH A 80 580 154 HOH HOH . F 6 HOH A 81 581 2 HOH HOH . F 6 HOH A 82 582 234 HOH HOH . F 6 HOH A 83 583 68 HOH HOH . F 6 HOH A 84 584 71 HOH HOH . F 6 HOH A 85 585 50 HOH HOH . F 6 HOH A 86 586 245 HOH HOH . F 6 HOH A 87 587 12 HOH HOH . F 6 HOH A 88 588 236 HOH HOH . F 6 HOH A 89 589 240 HOH HOH . F 6 HOH A 90 590 133 HOH HOH . F 6 HOH A 91 591 303 HOH HOH . F 6 HOH A 92 592 25 HOH HOH . F 6 HOH A 93 593 102 HOH HOH . F 6 HOH A 94 594 84 HOH HOH . F 6 HOH A 95 595 39 HOH HOH . F 6 HOH A 96 596 207 HOH HOH . F 6 HOH A 97 597 288 HOH HOH . F 6 HOH A 98 598 18 HOH HOH . F 6 HOH A 99 599 191 HOH HOH . F 6 HOH A 100 600 187 HOH HOH . F 6 HOH A 101 601 24 HOH HOH . F 6 HOH A 102 602 86 HOH HOH . F 6 HOH A 103 603 67 HOH HOH . F 6 HOH A 104 604 276 HOH HOH . F 6 HOH A 105 605 170 HOH HOH . F 6 HOH A 106 606 300 HOH HOH . F 6 HOH A 107 607 291 HOH HOH . F 6 HOH A 108 608 114 HOH HOH . F 6 HOH A 109 609 29 HOH HOH . F 6 HOH A 110 610 16 HOH HOH . F 6 HOH A 111 611 184 HOH HOH . F 6 HOH A 112 612 94 HOH HOH . F 6 HOH A 113 613 19 HOH HOH . F 6 HOH A 114 614 157 HOH HOH . F 6 HOH A 115 615 57 HOH HOH . F 6 HOH A 116 616 34 HOH HOH . F 6 HOH A 117 617 100 HOH HOH . F 6 HOH A 118 618 117 HOH HOH . F 6 HOH A 119 619 197 HOH HOH . F 6 HOH A 120 620 166 HOH HOH . F 6 HOH A 121 621 122 HOH HOH . F 6 HOH A 122 622 91 HOH HOH . F 6 HOH A 123 623 21 HOH HOH . F 6 HOH A 124 624 153 HOH HOH . F 6 HOH A 125 625 49 HOH HOH . F 6 HOH A 126 626 17 HOH HOH . F 6 HOH A 127 627 36 HOH HOH . F 6 HOH A 128 628 249 HOH HOH . F 6 HOH A 129 629 167 HOH HOH . F 6 HOH A 130 630 172 HOH HOH . F 6 HOH A 131 631 216 HOH HOH . F 6 HOH A 132 632 20 HOH HOH . F 6 HOH A 133 633 204 HOH HOH . F 6 HOH A 134 634 14 HOH HOH . F 6 HOH A 135 635 76 HOH HOH . F 6 HOH A 136 636 79 HOH HOH . F 6 HOH A 137 637 111 HOH HOH . F 6 HOH A 138 638 269 HOH HOH . F 6 HOH A 139 639 143 HOH HOH . F 6 HOH A 140 640 99 HOH HOH . F 6 HOH A 141 641 230 HOH HOH . F 6 HOH A 142 642 206 HOH HOH . F 6 HOH A 143 643 233 HOH HOH . F 6 HOH A 144 644 31 HOH HOH . F 6 HOH A 145 645 224 HOH HOH . F 6 HOH A 146 646 144 HOH HOH . F 6 HOH A 147 647 123 HOH HOH . F 6 HOH A 148 648 26 HOH HOH . F 6 HOH A 149 649 309 HOH HOH . F 6 HOH A 150 650 254 HOH HOH . F 6 HOH A 151 651 103 HOH HOH . F 6 HOH A 152 652 137 HOH HOH . F 6 HOH A 153 653 101 HOH HOH . F 6 HOH A 154 654 160 HOH HOH . F 6 HOH A 155 655 237 HOH HOH . F 6 HOH A 156 656 235 HOH HOH . F 6 HOH A 157 657 85 HOH HOH . F 6 HOH A 158 658 40 HOH HOH . F 6 HOH A 159 659 130 HOH HOH . F 6 HOH A 160 660 70 HOH HOH . F 6 HOH A 161 661 61 HOH HOH . F 6 HOH A 162 662 271 HOH HOH . F 6 HOH A 163 663 115 HOH HOH . F 6 HOH A 164 664 136 HOH HOH . F 6 HOH A 165 665 265 HOH HOH . F 6 HOH A 166 666 43 HOH HOH . F 6 HOH A 167 667 283 HOH HOH . F 6 HOH A 168 668 299 HOH HOH . F 6 HOH A 169 669 1 HOH HOH . F 6 HOH A 170 670 48 HOH HOH . F 6 HOH A 171 671 53 HOH HOH . F 6 HOH A 172 672 104 HOH HOH . F 6 HOH A 173 673 315 HOH HOH . F 6 HOH A 174 674 141 HOH HOH . F 6 HOH A 175 675 179 HOH HOH . F 6 HOH A 176 676 174 HOH HOH . F 6 HOH A 177 677 118 HOH HOH . F 6 HOH A 178 678 223 HOH HOH . F 6 HOH A 179 679 51 HOH HOH . F 6 HOH A 180 680 54 HOH HOH . F 6 HOH A 181 681 317 HOH HOH . F 6 HOH A 182 682 83 HOH HOH . F 6 HOH A 183 683 47 HOH HOH . F 6 HOH A 184 684 297 HOH HOH . F 6 HOH A 185 685 65 HOH HOH . F 6 HOH A 186 686 108 HOH HOH . F 6 HOH A 187 687 7 HOH HOH . F 6 HOH A 188 688 46 HOH HOH . F 6 HOH A 189 689 281 HOH HOH . F 6 HOH A 190 690 92 HOH HOH . F 6 HOH A 191 691 189 HOH HOH . F 6 HOH A 192 692 165 HOH HOH . F 6 HOH A 193 693 272 HOH HOH . F 6 HOH A 194 694 301 HOH HOH . F 6 HOH A 195 695 105 HOH HOH . F 6 HOH A 196 696 121 HOH HOH . F 6 HOH A 197 697 229 HOH HOH . F 6 HOH A 198 698 27 HOH HOH . F 6 HOH A 199 699 171 HOH HOH . F 6 HOH A 200 700 285 HOH HOH . F 6 HOH A 201 701 246 HOH HOH . F 6 HOH A 202 702 244 HOH HOH . F 6 HOH A 203 703 201 HOH HOH . F 6 HOH A 204 704 73 HOH HOH . F 6 HOH A 205 705 139 HOH HOH . F 6 HOH A 206 706 188 HOH HOH . F 6 HOH A 207 707 30 HOH HOH . F 6 HOH A 208 708 140 HOH HOH . F 6 HOH A 209 709 226 HOH HOH . F 6 HOH A 210 710 45 HOH HOH . F 6 HOH A 211 711 6 HOH HOH . F 6 HOH A 212 712 161 HOH HOH . F 6 HOH A 213 713 238 HOH HOH . F 6 HOH A 214 714 190 HOH HOH . F 6 HOH A 215 715 287 HOH HOH . F 6 HOH A 216 716 77 HOH HOH . F 6 HOH A 217 717 120 HOH HOH . F 6 HOH A 218 718 59 HOH HOH . F 6 HOH A 219 719 210 HOH HOH . F 6 HOH A 220 720 96 HOH HOH . F 6 HOH A 221 721 270 HOH HOH . F 6 HOH A 222 722 308 HOH HOH . F 6 HOH A 223 723 302 HOH HOH . F 6 HOH A 224 724 213 HOH HOH . F 6 HOH A 225 725 306 HOH HOH . F 6 HOH A 226 726 314 HOH HOH . F 6 HOH A 227 727 32 HOH HOH . F 6 HOH A 228 728 279 HOH HOH . F 6 HOH A 229 729 193 HOH HOH . F 6 HOH A 230 730 56 HOH HOH . F 6 HOH A 231 731 219 HOH HOH . F 6 HOH A 232 732 4 HOH HOH . F 6 HOH A 233 733 113 HOH HOH . F 6 HOH A 234 734 126 HOH HOH . F 6 HOH A 235 735 119 HOH HOH . F 6 HOH A 236 736 262 HOH HOH . F 6 HOH A 237 737 289 HOH HOH . F 6 HOH A 238 738 294 HOH HOH . F 6 HOH A 239 739 214 HOH HOH . F 6 HOH A 240 740 239 HOH HOH . F 6 HOH A 241 741 163 HOH HOH . F 6 HOH A 242 742 142 HOH HOH . F 6 HOH A 243 743 263 HOH HOH . F 6 HOH A 244 744 98 HOH HOH . F 6 HOH A 245 745 183 HOH HOH . F 6 HOH A 246 746 208 HOH HOH . F 6 HOH A 247 747 248 HOH HOH . F 6 HOH A 248 748 305 HOH HOH . F 6 HOH A 249 749 222 HOH HOH . F 6 HOH A 250 750 135 HOH HOH . F 6 HOH A 251 751 298 HOH HOH . F 6 HOH A 252 752 231 HOH HOH . F 6 HOH A 253 753 97 HOH HOH . F 6 HOH A 254 754 296 HOH HOH . F 6 HOH A 255 755 200 HOH HOH . F 6 HOH A 256 756 312 HOH HOH . F 6 HOH A 257 757 107 HOH HOH . F 6 HOH A 258 758 304 HOH HOH . F 6 HOH A 259 759 280 HOH HOH . F 6 HOH A 260 760 155 HOH HOH . F 6 HOH A 261 761 295 HOH HOH . F 6 HOH A 262 762 196 HOH HOH . F 6 HOH A 263 763 181 HOH HOH . F 6 HOH A 264 764 284 HOH HOH . F 6 HOH A 265 765 81 HOH HOH . F 6 HOH A 266 766 178 HOH HOH . F 6 HOH A 267 767 38 HOH HOH . F 6 HOH A 268 768 132 HOH HOH . F 6 HOH A 269 769 173 HOH HOH . F 6 HOH A 270 770 258 HOH HOH . F 6 HOH A 271 771 260 HOH HOH . F 6 HOH A 272 772 134 HOH HOH . F 6 HOH A 273 773 267 HOH HOH . F 6 HOH A 274 774 116 HOH HOH . F 6 HOH A 275 775 261 HOH HOH . F 6 HOH A 276 776 203 HOH HOH . F 6 HOH A 277 777 255 HOH HOH . F 6 HOH A 278 778 250 HOH HOH . F 6 HOH A 279 779 310 HOH HOH . F 6 HOH A 280 780 127 HOH HOH . F 6 HOH A 281 781 177 HOH HOH . F 6 HOH A 282 782 149 HOH HOH . F 6 HOH A 283 783 215 HOH HOH . F 6 HOH A 284 784 37 HOH HOH . F 6 HOH A 285 785 124 HOH HOH . F 6 HOH A 286 786 175 HOH HOH . F 6 HOH A 287 787 278 HOH HOH . F 6 HOH A 288 788 158 HOH HOH . F 6 HOH A 289 789 66 HOH HOH . F 6 HOH A 290 790 318 HOH HOH . F 6 HOH A 291 791 256 HOH HOH . F 6 HOH A 292 792 64 HOH HOH . F 6 HOH A 293 793 311 HOH HOH . F 6 HOH A 294 794 148 HOH HOH . F 6 HOH A 295 795 151 HOH HOH . F 6 HOH A 296 796 274 HOH HOH . F 6 HOH A 297 797 78 HOH HOH . F 6 HOH A 298 798 195 HOH HOH . F 6 HOH A 299 799 257 HOH HOH . F 6 HOH A 300 800 128 HOH HOH . F 6 HOH A 301 801 185 HOH HOH . F 6 HOH A 302 802 164 HOH HOH . F 6 HOH A 303 803 275 HOH HOH . F 6 HOH A 304 804 282 HOH HOH . F 6 HOH A 305 805 313 HOH HOH . F 6 HOH A 306 806 89 HOH HOH . F 6 HOH A 307 807 159 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . D 4 -13.17 -5.288 18.755 0.53 13.32 ? C FMT 403 A 1 HETATM 2 O O1 FMT . . . D 4 -12.036 -4.899 19.021 0.53 13.4 ? O1 FMT 403 A 1 HETATM 3 O O2 FMT . . . D 4 -13.678 -5.317 17.64 0.53 14.85 ? O2 FMT 403 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 3 #