data_9C07 # _model_server_result.job_id XRZibOw9NaNW91yoMxtK0g _model_server_result.datetime_utc '2025-02-27 10:16:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9c07 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":403}' # _entry.id 9C07 # _exptl.entry_id 9C07 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 226.441 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXADECANE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9C07 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9C07 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 V N N ? 6 HA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O THR 110 U THR 110 1_555 IA K K . A K 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.86 ? metalc ? metalc2 A O THR 110 U THR 110 1_555 LA K K . A K 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? metalc ? metalc3 A O ILE 111 U ILE 111 1_555 KA K K . A K 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.625 ? metalc ? metalc4 A O ILE 111 U ILE 111 1_555 LA K K . A K 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.159 ? metalc ? metalc5 A O GLY 112 U GLY 112 1_555 JA K K . A K 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.743 ? metalc ? metalc6 A O GLY 112 U GLY 112 1_555 KA K K . A K 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.064 ? metalc ? metalc7 A O PHE 113 U PHE 113 1_555 JA K K . A K 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.331 ? metalc ? metalc8 A O THR 237 U THR 237 1_555 IA K K . A K 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.873 ? metalc ? metalc9 A O THR 237 U THR 237 1_555 LA K K . A K 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc10 A O ILE 238 U ILE 238 1_555 KA K K . A K 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc11 A O ILE 238 U ILE 238 1_555 LA K K . A K 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.274 ? metalc ? metalc12 A O GLY 239 U GLY 239 1_555 JA K K . A K 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc13 A O GLY 239 U GLY 239 1_555 KA K K . A K 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.298 ? metalc ? metalc14 A O PHE 240 U PHE 240 1_555 JA K K . A K 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.362 ? metalc ? metalc15 B O THR 110 A THR 110 1_555 IA K K . A K 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.861 ? metalc ? metalc16 B O THR 110 A THR 110 1_555 LA K K . A K 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? metalc ? metalc17 B O ILE 111 A ILE 111 1_555 KA K K . A K 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.619 ? metalc ? metalc18 B O ILE 111 A ILE 111 1_555 LA K K . A K 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.174 ? metalc ? metalc19 B O GLY 112 A GLY 112 1_555 JA K K . A K 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? metalc ? metalc20 B O GLY 112 A GLY 112 1_555 KA K K . A K 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.166 ? metalc ? metalc21 B O PHE 113 A PHE 113 1_555 JA K K . A K 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.308 ? metalc ? metalc22 B O THR 237 A THR 237 1_555 IA K K . A K 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.821 ? metalc ? metalc23 B O THR 237 A THR 237 1_555 LA K K . A K 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc24 B O ILE 238 A ILE 238 1_555 KA K K . A K 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc25 B O ILE 238 A ILE 238 1_555 LA K K . A K 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.335 ? metalc ? metalc26 B O GLY 239 A GLY 239 1_555 JA K K . A K 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? metalc ? metalc27 B O GLY 239 A GLY 239 1_555 KA K K . A K 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.392 ? metalc ? metalc28 B O PHE 240 A PHE 240 1_555 JA K K . A K 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.392 ? # _chem_comp.formula 'C16 H34' _chem_comp.formula_weight 226.441 _chem_comp.id R16 _chem_comp.mon_nstd_flag . _chem_comp.name HEXADECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C27 C28 R16 sing 407 n n C27 H271 R16 sing 408 n n C27 H272 R16 sing 409 n n C27 H273 R16 sing 410 n n C28 C29 R16 sing 411 n n C28 H281 R16 sing 412 n n C28 H282 R16 sing 413 n n C29 C30 R16 sing 414 n n C29 H291 R16 sing 415 n n C29 H292 R16 sing 416 n n C30 C31 R16 sing 417 n n C30 H301 R16 sing 418 n n C30 H302 R16 sing 419 n n C31 C32 R16 sing 420 n n C31 H311 R16 sing 421 n n C31 H312 R16 sing 422 n n C32 C33 R16 sing 423 n n C32 H321 R16 sing 424 n n C32 H322 R16 sing 425 n n C33 C34 R16 sing 426 n n C33 H331 R16 sing 427 n n C33 H332 R16 sing 428 n n C34 C35 R16 sing 429 n n C34 H341 R16 sing 430 n n C34 H342 R16 sing 431 n n C35 C36 R16 sing 432 n n C35 H351 R16 sing 433 n n C35 H352 R16 sing 434 n n C36 C37 R16 sing 435 n n C36 H361 R16 sing 436 n n C36 H362 R16 sing 437 n n C37 C38 R16 sing 438 n n C37 H371 R16 sing 439 n n C37 H372 R16 sing 440 n n C38 C39 R16 sing 441 n n C38 H381 R16 sing 442 n n C38 H382 R16 sing 443 n n C39 C40 R16 sing 444 n n C39 H391 R16 sing 445 n n C39 H392 R16 sing 446 n n C40 C41 R16 sing 447 n n C40 H401 R16 sing 448 n n C40 H402 R16 sing 449 n n C41 C42 R16 sing 450 n n C41 H411 R16 sing 451 n n C41 H412 R16 sing 452 n n C42 H421 R16 sing 453 n n C42 H422 R16 sing 454 n n C42 H423 R16 sing 455 n n # _atom_sites.entry_id 9C07 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 D12 U 1 401 302 D12 D12 . D 2 D12 U 1 402 303 D12 D12 . E 3 OCT U 1 403 305 OCT D08 . F 3 OCT U 1 404 306 OCT D08 . G 2 D12 U 1 405 307 D12 D12 . H 4 HEX U 1 406 308 HEX D06 . I 3 OCT U 1 407 309 OCT D08 . J 4 HEX U 1 408 311 HEX D06 . K 4 HEX U 1 409 313 HEX D06 . L 4 HEX U 1 410 317 HEX D06 . M 4 HEX U 1 411 318 HEX D06 . N 4 HEX U 1 412 319 HEX D06 . O 4 HEX U 1 413 320 HEX D06 . P 5 EIC U 1 414 321 EIC EIC . Q 2 D12 U 1 415 303 D12 D12 . R 3 OCT U 1 416 304 OCT D08 . S 4 HEX U 1 417 2 HEX D06 . T 3 OCT A 1 401 304 OCT D08 . U 4 HEX A 1 402 310 HEX D06 . V 6 R16 A 1 403 322 R16 D16 . W 2 D12 A 1 404 302 D12 D12 . X 3 OCT A 1 405 305 OCT D08 . Y 3 OCT A 1 406 306 OCT D08 . Z 2 D12 A 1 407 307 D12 D12 . AA 4 HEX A 1 408 308 HEX D06 . BA 3 OCT A 1 409 309 OCT D08 . CA 4 HEX A 1 410 311 HEX D06 . DA 4 HEX A 1 411 314 HEX D06 . EA 4 HEX A 1 412 316 HEX D06 . FA 4 HEX A 1 413 317 HEX D06 . GA 5 EIC A 1 414 318 EIC EIC . HA 6 R16 A 1 415 319 R16 D16 . IA 7 K A 1 416 3 K K . JA 7 K A 1 417 4 K K . KA 7 K A 1 418 5 K K . LA 7 K A 1 419 6 K K . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C27 R16 . . . V 6 104.942 113.476 124.292 1 20 ? C27 R16 403 A 1 HETATM 2 C C28 R16 . . . V 6 104.348 113.077 125.617 1 20 ? C28 R16 403 A 1 HETATM 3 C C29 R16 . . . V 6 103.507 114.192 126.189 1 20 ? C29 R16 403 A 1 HETATM 4 C C30 R16 . . . V 6 102.822 113.748 127.466 1 20 ? C30 R16 403 A 1 HETATM 5 C C31 R16 . . . V 6 102.121 114.899 128.184 1 20 ? C31 R16 403 A 1 HETATM 6 C C32 R16 . . . V 6 101.334 114.408 129.401 1 20 ? C32 R16 403 A 1 HETATM 7 C C33 R16 . . . V 6 100.232 115.391 129.798 1 20 ? C33 R16 403 A 1 HETATM 8 C C34 R16 . . . V 6 99.588 115.017 131.135 1 20 ? C34 R16 403 A 1 HETATM 9 C C35 R16 . . . V 6 98.612 116.088 131.62 1 20 ? C35 R16 403 A 1 HETATM 10 C C36 R16 . . . V 6 98.393 116.012 133.129 1 20 ? C36 R16 403 A 1 HETATM 11 C C37 R16 . . . V 6 97.832 117.322 133.673 1 20 ? C37 R16 403 A 1 HETATM 12 C C38 R16 . . . V 6 97.773 117.33 135.194 1 20 ? C38 R16 403 A 1 HETATM 13 C C39 R16 . . . V 6 99.147 117.56 135.798 1 20 ? C39 R16 403 A 1 HETATM 14 C C40 R16 . . . V 6 99.193 118.8 136.643 1 20 ? C40 R16 403 A 1 HETATM 15 C C41 R16 . . . V 6 98.624 118.535 138.011 1 20 ? C41 R16 403 A 1 HETATM 16 C C42 R16 . . . V 6 99.72 118.597 139.039 1 20 ? C42 R16 403 A 1 HETATM 17 H H271 R16 . . . V 6 104.399 113.051 123.437 1 20 ? H271 R16 403 A 1 HETATM 18 H H272 R16 . . . V 6 104.951 114.564 124.152 1 20 ? H272 R16 403 A 1 HETATM 19 H H273 R16 . . . V 6 105.983 113.142 124.184 1 20 ? H273 R16 403 A 1 HETATM 20 H H281 R16 . . . V 6 105.156 112.804 126.323 1 20 ? H281 R16 403 A 1 HETATM 21 H H282 R16 . . . V 6 103.753 112.15 125.509 1 20 ? H282 R16 403 A 1 HETATM 22 H H291 R16 . . . V 6 104.144 115.08 126.378 1 20 ? H291 R16 403 A 1 HETATM 23 H H292 R16 . . . V 6 102.77 114.536 125.441 1 20 ? H292 R16 403 A 1 HETATM 24 H H301 R16 . . . V 6 102.099 112.942 127.238 1 20 ? H301 R16 403 A 1 HETATM 25 H H302 R16 . . . V 6 103.56 113.272 128.145 1 20 ? H302 R16 403 A 1 HETATM 26 H H311 R16 . . . V 6 102.858 115.666 128.492 1 20 ? H311 R16 403 A 1 HETATM 27 H H312 R16 . . . V 6 101.447 115.431 127.481 1 20 ? H312 R16 403 A 1 HETATM 28 H H321 R16 . . . V 6 100.904 113.407 129.194 1 20 ? H321 R16 403 A 1 HETATM 29 H H322 R16 . . . V 6 102.016 114.238 130.258 1 20 ? H322 R16 403 A 1 HETATM 30 H H331 R16 . . . V 6 100.644 116.418 129.844 1 20 ? H331 R16 403 A 1 HETATM 31 H H332 R16 . . . V 6 99.457 115.439 129.007 1 20 ? H332 R16 403 A 1 HETATM 32 H H341 R16 . . . V 6 100.378 114.848 131.895 1 20 ? H341 R16 403 A 1 HETATM 33 H H342 R16 . . . V 6 99.072 114.04 131.052 1 20 ? H342 R16 403 A 1 HETATM 34 H H351 R16 . . . V 6 97.645 115.994 131.091 1 20 ? H351 R16 403 A 1 HETATM 35 H H352 R16 . . . V 6 98.984 117.092 131.339 1 20 ? H352 R16 403 A 1 HETATM 36 H H361 R16 . . . V 6 99.346 115.763 133.637 1 20 ? H361 R16 403 A 1 HETATM 37 H H362 R16 . . . V 6 97.716 115.174 133.383 1 20 ? H362 R16 403 A 1 HETATM 38 H H371 R16 . . . V 6 96.824 117.507 133.255 1 20 ? H371 R16 403 A 1 HETATM 39 H H372 R16 . . . V 6 98.44 118.173 133.314 1 20 ? H372 R16 403 A 1 HETATM 40 H H381 R16 . . . V 6 97.351 116.376 135.566 1 20 ? H381 R16 403 A 1 HETATM 41 H H382 R16 . . . V 6 97.063 118.102 135.546 1 20 ? H382 R16 403 A 1 HETATM 42 H H391 R16 . . . V 6 99.443 116.68 136.405 1 20 ? H391 R16 403 A 1 HETATM 43 H H392 R16 . . . V 6 99.913 117.617 135 1 20 ? H392 R16 403 A 1 HETATM 44 H H401 R16 . . . V 6 98.646 119.627 136.152 1 20 ? H401 R16 403 A 1 HETATM 45 H H402 R16 . . . V 6 100.234 119.166 136.736 1 20 ? H402 R16 403 A 1 HETATM 46 H H411 R16 . . . V 6 98.122 117.545 138.044 1 20 ? H411 R16 403 A 1 HETATM 47 H H412 R16 . . . V 6 97.835 119.275 138.24 1 20 ? H412 R16 403 A 1 HETATM 48 H H421 R16 . . . V 6 100.501 117.851 138.844 1 20 ? H421 R16 403 A 1 HETATM 49 H H422 R16 . . . V 6 100.23 119.568 139.061 1 20 ? H422 R16 403 A 1 HETATM 50 H H423 R16 . . . V 6 99.357 118.4 140.056 1 20 ? H423 R16 403 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 50 #