data_9C3F # _model_server_result.job_id Y8OQ4WyEvF_t1oFueBpUAQ _model_server_result.datetime_utc '2025-04-20 20:13:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9c3f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 9C3F # _exptl.entry_id 9C3F _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 744.034 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9C3F _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9C3F _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C41 H78 N O8 P' _chem_comp.formula_weight 744.034 _chem_comp.id PEE _chem_comp.mon_nstd_flag n _chem_comp.name 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms DOPE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C5 PEE sing 317 n n C5 C4 PEE sing 318 n n C4 O4P PEE sing 319 n n O4P P PEE sing 320 n n O1P P PEE doub 321 n n C1 O3P PEE sing 322 n n C1 C2 PEE sing 323 n n O3P P PEE sing 324 n n P O2P PEE sing 325 n n C2 C3 PEE sing 326 n n C2 O2 PEE sing 327 n n C3 O3 PEE sing 328 n n O2 C10 PEE sing 329 n n C31 C30 PEE sing 330 n n C31 C32 PEE sing 331 n n C33 C32 PEE sing 332 n n C33 C34 PEE sing 333 n n C30 O3 PEE sing 334 n n C30 O5 PEE doub 335 n n C10 O4 PEE doub 336 n n C10 C11 PEE sing 337 n n C34 C35 PEE sing 338 n n C11 C12 PEE sing 339 n n C35 C36 PEE sing 340 n n C36 C37 PEE sing 341 n n C37 C38 PEE sing 342 n n C38 C39 PEE doub 343 z n C12 C13 PEE sing 344 n n C39 C40 PEE sing 345 n n C13 C14 PEE sing 346 n n C14 C15 PEE sing 347 n n C40 C41 PEE sing 348 n n C15 C16 PEE sing 349 n n C41 C42 PEE sing 350 n n C16 C17 PEE sing 351 n n C42 C43 PEE sing 352 n n C17 C18 PEE sing 353 n n C43 C44 PEE sing 354 n n C18 C19 PEE doub 355 z n C46 C47 PEE sing 356 n n C46 C45 PEE sing 357 n n C44 C45 PEE sing 358 n n C19 C20 PEE sing 359 n n C20 C21 PEE sing 360 n n C21 C22 PEE sing 361 n n C22 C23 PEE sing 362 n n C23 C24 PEE sing 363 n n C24 C25 PEE sing 364 n n C26 C25 PEE sing 365 n n C26 C27 PEE sing 366 n n C27 H7 PEE sing 367 n n C27 H8 PEE sing 368 n n C27 H82 PEE sing 369 n n C26 H5 PEE sing 370 n n C26 H6 PEE sing 371 n n C25 H12 PEE sing 372 n n C25 H4 PEE sing 373 n n C24 H10 PEE sing 374 n n C24 H11 PEE sing 375 n n C23 H83 PEE sing 376 n n C23 H9 PEE sing 377 n n C22 H2 PEE sing 378 n n C22 H3 PEE sing 379 n n C21 H14 PEE sing 380 n n C21 H1 PEE sing 381 n n C20 H16 PEE sing 382 n n C20 H13 PEE sing 383 n n C19 H18 PEE sing 384 n n C18 H20 PEE sing 385 n n C17 H22 PEE sing 386 n n C17 H19 PEE sing 387 n n C16 H21 PEE sing 388 n n C16 H28 PEE sing 389 n n C15 H23 PEE sing 390 n n C15 H24 PEE sing 391 n n C14 H25 PEE sing 392 n n C14 H26 PEE sing 393 n n C13 H17 PEE sing 394 n n C13 H27 PEE sing 395 n n C12 H15 PEE sing 396 n n C12 H29 PEE sing 397 n n C11 H30 PEE sing 398 n n C11 H31 PEE sing 399 n n C2 H32 PEE sing 400 n n C1 H33 PEE sing 401 n n C1 H34 PEE sing 402 n n O2P H35 PEE sing 403 n n C4 H36 PEE sing 404 n n C4 H37 PEE sing 405 n n C5 H38 PEE sing 406 n n C5 H39 PEE sing 407 n n N H40 PEE sing 408 n n N H41 PEE sing 409 n n C3 H43 PEE sing 410 n n C3 H44 PEE sing 411 n n C31 H45 PEE sing 412 n n C31 H46 PEE sing 413 n n C32 H47 PEE sing 414 n n C32 H48 PEE sing 415 n n C33 H49 PEE sing 416 n n C33 H50 PEE sing 417 n n C34 H51 PEE sing 418 n n C34 H52 PEE sing 419 n n C35 H53 PEE sing 420 n n C35 H54 PEE sing 421 n n C36 H55 PEE sing 422 n n C36 H56 PEE sing 423 n n C37 H57 PEE sing 424 n n C37 H58 PEE sing 425 n n C38 H59 PEE sing 426 n n C39 H60 PEE sing 427 n n C40 H81 PEE sing 428 n n C40 H61 PEE sing 429 n n C41 H80 PEE sing 430 n n C41 H62 PEE sing 431 n n C42 H63 PEE sing 432 n n C42 H64 PEE sing 433 n n C43 H65 PEE sing 434 n n C43 H66 PEE sing 435 n n C44 H67 PEE sing 436 n n C44 H68 PEE sing 437 n n C45 H69 PEE sing 438 n n C45 H70 PEE sing 439 n n C46 H71 PEE sing 440 n n C46 H72 PEE sing 441 n n C47 H73 PEE sing 442 n n C47 H74 PEE sing 443 n n C47 H75 PEE sing 444 n n # _atom_sites.entry_id 9C3F _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 LMT A 1 601 501 LMT LMT . C 3 PEE A 1 602 502 PEE PEE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C27 PEE . . . C 3 136.473 154.524 147.448 1 85.29 ? C27 PEE 602 A 1 HETATM 2 C C26 PEE . . . C 3 136.47 153.859 146.092 1 85.29 ? C26 PEE 602 A 1 HETATM 3 C C25 PEE . . . C 3 135.345 152.874 145.901 1 85.29 ? C25 PEE 602 A 1 HETATM 4 C C24 PEE . . . C 3 133.965 153.472 146.008 1 85.29 ? C24 PEE 602 A 1 HETATM 5 C C23 PEE . . . C 3 132.842 152.475 145.858 1 85.29 ? C23 PEE 602 A 1 HETATM 6 C C22 PEE . . . C 3 132.853 151.37 146.886 1 85.29 ? C22 PEE 602 A 1 HETATM 7 C C21 PEE . . . C 3 131.668 150.42 146.817 1 85.29 ? C21 PEE 602 A 1 HETATM 8 C C20 PEE . . . C 3 130.337 151.055 147.084 1 85.29 ? C20 PEE 602 A 1 HETATM 9 C C19 PEE . . . C 3 129.565 151.401 145.848 1 85.29 ? C19 PEE 602 A 1 HETATM 10 C C18 PEE . . . C 3 129.876 151.07 144.622 1 85.29 ? C18 PEE 602 A 1 HETATM 11 C C17 PEE . . . C 3 129.105 151.435 143.391 1 85.29 ? C17 PEE 602 A 1 HETATM 12 C C16 PEE . . . C 3 127.697 150.926 143.385 1 85.29 ? C16 PEE 602 A 1 HETATM 13 C C15 PEE . . . C 3 127.576 149.417 143.548 1 85.29 ? C15 PEE 602 A 1 HETATM 14 C C14 PEE . . . C 3 126.196 148.861 143.286 1 85.29 ? C14 PEE 602 A 1 HETATM 15 C C13 PEE . . . C 3 125.098 149.47 144.123 1 85.29 ? C13 PEE 602 A 1 HETATM 16 C C12 PEE . . . C 3 123.78 148.716 144.057 1 85.29 ? C12 PEE 602 A 1 HETATM 17 C C11 PEE . . . C 3 123.178 148.704 142.686 1 85.29 ? C11 PEE 602 A 1 HETATM 18 C C10 PEE . . . C 3 122.159 149.787 142.459 1 85.29 ? C10 PEE 602 A 1 HETATM 19 O O4 PEE . . . C 3 121.648 150.02 141.395 1 85.29 ? O4 PEE 602 A 1 HETATM 20 O O2 PEE . . . C 3 121.873 150.49 143.566 1 85.29 ? O2 PEE 602 A 1 HETATM 21 C C2 PEE . . . C 3 120.91 151.577 143.465 1 85.29 ? C2 PEE 602 A 1 HETATM 22 C C1 PEE . . . C 3 119.488 151.068 143.371 1 85.29 ? C1 PEE 602 A 1 HETATM 23 O O3P PEE . . . C 3 119.062 150.542 144.658 1 85.29 ? O3P PEE 602 A 1 HETATM 24 P P PEE . . . C 3 117.507 150.221 144.9 1 85.29 ? P PEE 602 A 1 HETATM 25 O O2P PEE . . . C 3 117.366 149.547 146.237 1 85.29 ? O2P PEE 602 A 1 HETATM 26 O O1P PEE . . . C 3 116.722 151.469 144.608 1 85.29 ? O1P PEE 602 A 1 HETATM 27 O O4P PEE . . . C 3 117.17 149.139 143.763 1 85.29 ? O4P PEE 602 A 1 HETATM 28 C C4 PEE . . . C 3 115.794 148.699 143.589 1 85.29 ? C4 PEE 602 A 1 HETATM 29 C C5 PEE . . . C 3 115.714 147.707 142.459 1 85.29 ? C5 PEE 602 A 1 HETATM 30 N N PEE . . . C 3 114.342 147.248 142.234 1 85.29 ? N PEE 602 A 1 HETATM 31 C C3 PEE . . . C 3 121.132 152.541 144.608 1 85.29 ? C3 PEE 602 A 1 HETATM 32 O O3 PEE . . . C 3 122.522 152.934 144.608 1 85.29 ? O3 PEE 602 A 1 HETATM 33 C C30 PEE . . . C 3 122.904 153.744 145.589 1 85.29 ? C30 PEE 602 A 1 HETATM 34 O O5 PEE . . . C 3 122.156 154.141 146.443 1 85.29 ? O5 PEE 602 A 1 HETATM 35 C C31 PEE . . . C 3 124.364 154.089 145.476 1 85.29 ? C31 PEE 602 A 1 HETATM 36 C C32 PEE . . . C 3 124.855 154.981 146.573 1 85.29 ? C32 PEE 602 A 1 HETATM 37 C C33 PEE . . . C 3 124.97 154.267 147.91 1 85.29 ? C33 PEE 602 A 1 HETATM 38 C C34 PEE . . . C 3 126.04 153.203 147.956 1 85.29 ? C34 PEE 602 A 1 HETATM 39 C C35 PEE . . . C 3 126.243 152.592 149.321 1 85.29 ? C35 PEE 602 A 1 HETATM 40 C C36 PEE . . . C 3 127.435 151.649 149.417 1 85.29 ? C36 PEE 602 A 1 HETATM 41 C C37 PEE . . . C 3 127.719 151.159 150.803 1 85.29 ? C37 PEE 602 A 1 HETATM 42 C C38 PEE . . . C 3 128.992 150.379 150.908 1 85.29 ? C38 PEE 602 A 1 HETATM 43 C C39 PEE . . . C 3 129.538 149.97 152.025 1 85.29 ? C39 PEE 602 A 1 HETATM 44 C C40 PEE . . . C 3 130.819 149.206 152.158 1 85.29 ? C40 PEE 602 A 1 HETATM 45 C C41 PEE . . . C 3 131.401 148.782 150.845 1 85.29 ? C41 PEE 602 A 1 HETATM 46 C C42 PEE . . . C 3 132.829 148.272 150.933 1 85.29 ? C42 PEE 602 A 1 HETATM 47 C C43 PEE . . . C 3 133.39 147.769 149.627 1 85.29 ? C43 PEE 602 A 1 HETATM 48 C C44 PEE . . . C 3 134.889 147.594 149.624 1 85.29 ? C44 PEE 602 A 1 HETATM 49 C C45 PEE . . . C 3 135.416 146.683 150.704 1 85.29 ? C45 PEE 602 A 1 HETATM 50 C C46 PEE . . . C 3 136.919 146.567 150.714 1 85.29 ? C46 PEE 602 A 1 HETATM 51 C C47 PEE . . . C 3 137.462 145.683 151.81 1 85.29 ? C47 PEE 602 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 51 #