data_9C65 # _model_server_result.job_id Tq2-pvGiczhN1FI0ANig4w _model_server_result.datetime_utc '2025-06-19 12:35:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9c65 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 9C65 # _exptl.entry_id 9C65 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9C65 _cell.length_a 104.464 _cell.length_b 104.464 _cell.length_c 62.136 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9C65 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id E _struct_conn.ptnr1_label_atom_id C2 _struct_conn.ptnr1_label_comp_id SIA _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SIA _struct_conn.ptnr1_auth_seq_id 204 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id F _struct_conn.ptnr2_label_atom_id O17 _struct_conn.ptnr2_label_comp_id A1AUS _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id A1AUS _struct_conn.ptnr2_auth_seq_id 205 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.45 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 150 n n C1 C2 GOL sing 151 n n C1 H11 GOL sing 152 n n C1 H12 GOL sing 153 n n O1 HO1 GOL sing 154 n n C2 O2 GOL sing 155 n n C2 C3 GOL sing 156 n n C2 H2 GOL sing 157 n n O2 HO2 GOL sing 158 n n C3 O3 GOL sing 159 n n C3 H31 GOL sing 160 n n C3 H32 GOL sing 161 n n O3 HO3 GOL sing 162 n n # _atom_sites.entry_id 9C65 _atom_sites.fract_transf_matrix[1][1] 0.009573 _atom_sites.fract_transf_matrix[1][2] 0.005527 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011054 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016094 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 201 GOL GOL . C 3 MPD A 1 202 202 MPD MPD . D 2 GOL A 1 203 203 GOL GOL . E 4 SIA A 1 204 1 SIA SIA . F 5 A1AUS A 1 205 2 A1AUS Z1Z . G 6 HOH A 1 301 246 HOH HOH . G 6 HOH A 2 302 249 HOH HOH . G 6 HOH A 3 303 282 HOH HOH . G 6 HOH A 4 304 220 HOH HOH . G 6 HOH A 5 305 232 HOH HOH . G 6 HOH A 6 306 280 HOH HOH . G 6 HOH A 7 307 248 HOH HOH . G 6 HOH A 8 308 261 HOH HOH . G 6 HOH A 9 309 212 HOH HOH . G 6 HOH A 10 310 208 HOH HOH . G 6 HOH A 11 311 260 HOH HOH . G 6 HOH A 12 312 285 HOH HOH . G 6 HOH A 13 313 236 HOH HOH . G 6 HOH A 14 314 305 HOH HOH . G 6 HOH A 15 315 266 HOH HOH . G 6 HOH A 16 316 211 HOH HOH . G 6 HOH A 17 317 241 HOH HOH . G 6 HOH A 18 318 258 HOH HOH . G 6 HOH A 19 319 306 HOH HOH . G 6 HOH A 20 320 253 HOH HOH . G 6 HOH A 21 321 216 HOH HOH . G 6 HOH A 22 322 294 HOH HOH . G 6 HOH A 23 323 209 HOH HOH . G 6 HOH A 24 324 239 HOH HOH . G 6 HOH A 25 325 215 HOH HOH . G 6 HOH A 26 326 257 HOH HOH . G 6 HOH A 27 327 247 HOH HOH . G 6 HOH A 28 328 233 HOH HOH . G 6 HOH A 29 329 230 HOH HOH . G 6 HOH A 30 330 207 HOH HOH . G 6 HOH A 31 331 256 HOH HOH . G 6 HOH A 32 332 229 HOH HOH . G 6 HOH A 33 333 296 HOH HOH . G 6 HOH A 34 334 206 HOH HOH . G 6 HOH A 35 335 234 HOH HOH . G 6 HOH A 36 336 227 HOH HOH . G 6 HOH A 37 337 213 HOH HOH . G 6 HOH A 38 338 288 HOH HOH . G 6 HOH A 39 339 240 HOH HOH . G 6 HOH A 40 340 250 HOH HOH . G 6 HOH A 41 341 235 HOH HOH . G 6 HOH A 42 342 243 HOH HOH . G 6 HOH A 43 343 244 HOH HOH . G 6 HOH A 44 344 204 HOH HOH . G 6 HOH A 45 345 226 HOH HOH . G 6 HOH A 46 346 252 HOH HOH . G 6 HOH A 47 347 224 HOH HOH . G 6 HOH A 48 348 210 HOH HOH . G 6 HOH A 49 349 284 HOH HOH . G 6 HOH A 50 350 205 HOH HOH . G 6 HOH A 51 351 283 HOH HOH . G 6 HOH A 52 352 217 HOH HOH . G 6 HOH A 53 353 223 HOH HOH . G 6 HOH A 54 354 291 HOH HOH . G 6 HOH A 55 355 231 HOH HOH . G 6 HOH A 56 356 301 HOH HOH . G 6 HOH A 57 357 287 HOH HOH . G 6 HOH A 58 358 290 HOH HOH . G 6 HOH A 59 359 277 HOH HOH . G 6 HOH A 60 360 218 HOH HOH . G 6 HOH A 61 361 228 HOH HOH . G 6 HOH A 62 362 238 HOH HOH . G 6 HOH A 63 363 214 HOH HOH . G 6 HOH A 64 364 300 HOH HOH . G 6 HOH A 65 365 295 HOH HOH . G 6 HOH A 66 366 281 HOH HOH . G 6 HOH A 67 367 219 HOH HOH . G 6 HOH A 68 368 221 HOH HOH . G 6 HOH A 69 369 268 HOH HOH . G 6 HOH A 70 370 265 HOH HOH . G 6 HOH A 71 371 289 HOH HOH . G 6 HOH A 72 372 262 HOH HOH . G 6 HOH A 73 373 278 HOH HOH . G 6 HOH A 74 374 222 HOH HOH . G 6 HOH A 75 375 274 HOH HOH . G 6 HOH A 76 376 275 HOH HOH . G 6 HOH A 77 377 225 HOH HOH . G 6 HOH A 78 378 276 HOH HOH . G 6 HOH A 79 379 297 HOH HOH . G 6 HOH A 80 380 292 HOH HOH . G 6 HOH A 81 381 293 HOH HOH . G 6 HOH A 82 382 269 HOH HOH . G 6 HOH A 83 383 251 HOH HOH . G 6 HOH A 84 384 254 HOH HOH . G 6 HOH A 85 385 298 HOH HOH . G 6 HOH A 86 386 259 HOH HOH . G 6 HOH A 87 387 255 HOH HOH . G 6 HOH A 88 388 302 HOH HOH . G 6 HOH A 89 389 279 HOH HOH . G 6 HOH A 90 390 273 HOH HOH . G 6 HOH A 91 391 272 HOH HOH . G 6 HOH A 92 392 264 HOH HOH . G 6 HOH A 93 393 263 HOH HOH . G 6 HOH A 94 394 242 HOH HOH . G 6 HOH A 95 395 245 HOH HOH . G 6 HOH A 96 396 286 HOH HOH . G 6 HOH A 97 397 303 HOH HOH . G 6 HOH A 98 398 237 HOH HOH . G 6 HOH A 99 399 267 HOH HOH . G 6 HOH A 100 400 304 HOH HOH . G 6 HOH A 101 401 299 HOH HOH . G 6 HOH A 102 402 271 HOH HOH . G 6 HOH A 103 403 270 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 49.108 -46.226 -11.872 1 85.31 0 C1 GOL 203 A 1 HETATM 2 O O1 GOL . . . D 2 48.436 -46.372 -10.62 1 73.37 0 O1 GOL 203 A 1 HETATM 3 C C2 GOL . . . D 2 50.445 -45.502 -11.741 1 99.39 0 C2 GOL 203 A 1 HETATM 4 O O2 GOL . . . D 2 51.443 -46.389 -11.206 1 87.41 0 O2 GOL 203 A 1 HETATM 5 C C3 GOL . . . D 2 50.919 -44.856 -13.052 1 97.99 0 C3 GOL 203 A 1 HETATM 6 O O3 GOL . . . D 2 51.822 -43.732 -12.934 1 65.6 0 O3 GOL 203 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 252 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 6 #