data_9C6R
#
_model_server_result.job_id            -_F7d5PFYnOpWpYngTfgWA 
_model_server_result.datetime_utc      '2025-01-10 07:14:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9c6r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"AA","auth_seq_id":1202}' 
#
_entry.id    9C6R 
#
_exptl.entry_id    9C6R 
_exptl.method      'ELECTRON MICROSCOPY' 
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_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9C6R 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9C6R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    16-meric 
_pdbx_struct_assembly.oligomeric_count      16 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 Q N N 
? 3 T N N 
? 3 W N N 
? 3 AA N N 
? 3 CA N N 
? 3 FA N N 
? 3 IA N N 
? 3 LA N N 
#
_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GTP doub 174 n n 
PG O2G GTP sing 175 n n 
PG O3G GTP sing 176 n n 
PG O3B GTP sing 177 n n 
O2G HOG2 GTP sing 178 n n 
O3G HOG3 GTP sing 179 n n 
O3B PB GTP sing 180 n n 
PB O1B GTP doub 181 n n 
PB O2B GTP sing 182 n n 
PB O3A GTP sing 183 n n 
O2B HOB2 GTP sing 184 n n 
O3A PA GTP sing 185 n n 
PA O1A GTP doub 186 n n 
PA O2A GTP sing 187 n n 
PA O5' GTP sing 188 n n 
O2A HOA2 GTP sing 189 n n 
O5' C5' GTP sing 190 n n 
C5' C4' GTP sing 191 n n 
C5' H5' GTP sing 192 n n 
C5' "H5''" GTP sing 193 n n 
C4' O4' GTP sing 194 n n 
C4' C3' GTP sing 195 n n 
C4' H4' GTP sing 196 n n 
O4' C1' GTP sing 197 n n 
C3' O3' GTP sing 198 n n 
C3' C2' GTP sing 199 n n 
C3' H3' GTP sing 200 n n 
O3' HO3' GTP sing 201 n n 
C2' O2' GTP sing 202 n n 
C2' C1' GTP sing 203 n n 
C2' H2' GTP sing 204 n n 
O2' HO2' GTP sing 205 n n 
C1' N9 GTP sing 206 n n 
C1' H1' GTP sing 207 n n 
N9 C8 GTP sing 208 n y 
N9 C4 GTP sing 209 n y 
C8 N7 GTP doub 210 n y 
C8 H8 GTP sing 211 n n 
N7 C5 GTP sing 212 n y 
C5 C6 GTP sing 213 n n 
C5 C4 GTP doub 214 n y 
C6 O6 GTP doub 215 n n 
C6 N1 GTP sing 216 n n 
N1 C2 GTP sing 217 n n 
N1 HN1 GTP sing 218 n n 
C2 N2 GTP sing 219 n n 
C2 N3 GTP doub 220 n n 
N2 HN21 GTP sing 221 n n 
N2 HN22 GTP sing 222 n n 
N3 C4 GTP sing 223 n n 
#
_atom_sites.entry_id                     9C6R 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
Q 3 GTP A 1 601 601 GTP GTP . 
R 4 YGY B 1 1201 1201 YGY YGY . 
S 5 GDP B 1 1202 1202 GDP GDP . 
T 3 GTP F 1 601 601 GTP GTP . 
U 4 YGY G 1 1201 1201 YGY YGY . 
V 5 GDP G 1 1202 1202 GDP GDP . 
W 3 GTP K 1 601 601 GTP GTP . 
X 4 YGY L 1 1201 1201 YGY YGY . 
Y 5 GDP L 1 1202 1202 GDP GDP . 
Z 4 YGY P 1 1201 1201 YGY YGY . 
AA 3 GTP P 1 1202 601 GTP GTP . 
BA 5 GDP Q 1 501 1202 GDP GDP . 
CA 3 GTP U 1 601 601 GTP GTP . 
DA 4 YGY V 1 1201 1201 YGY YGY . 
EA 5 GDP V 1 1202 1202 GDP GDP . 
FA 3 GTP Z 1 601 601 GTP GTP . 
GA 4 YGY a 1 1201 1201 YGY YGY . 
HA 5 GDP a 1 1202 1202 GDP GDP . 
IA 3 GTP e 1 601 601 GTP GTP . 
JA 4 YGY f 1 1201 1201 YGY YGY . 
KA 5 GDP f 1 1202 1202 GDP GDP . 
LA 3 GTP j 1 601 601 GTP GTP . 
MA 4 YGY k 1 1201 1201 YGY YGY . 
NA 5 GDP k 1 1202 1202 GDP GDP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . AA 3 221.917 174.853 270.654 1 58.16 ? PG GTP 1202 P 1 
HETATM 2 O O1G GTP . . . AA 3 222.047 175.719 269.432 1 55.26 ? O1G GTP 1202 P 1 
HETATM 3 O O2G GTP . . . AA 3 223.263 174.74 271.315 1 63.88 ? O2G GTP 1202 P 1 
HETATM 4 O O3G GTP . . . AA 3 221.417 173.487 270.257 1 61.33 ? O3G GTP 1202 P 1 
HETATM 5 O O3B GTP . . . AA 3 220.892 175.556 271.672 1 49.77 ? O3B GTP 1202 P 1 
HETATM 6 P PB GTP . . . AA 3 219.314 175.537 271.383 1 48.9 ? PB GTP 1202 P 1 
HETATM 7 O O1B GTP . . . AA 3 219.159 175.297 269.91 1 52.25 ? O1B GTP 1202 P 1 
HETATM 8 O O2B GTP . . . AA 3 218.661 176.826 271.796 1 62.09 ? O2B GTP 1202 P 1 
HETATM 9 O O3A GTP . . . AA 3 218.656 174.286 272.147 1 49.52 ? O3A GTP 1202 P 1 
HETATM 10 P PA GTP . . . AA 3 219.106 173.774 273.601 1 70.95 ? PA GTP 1202 P 1 
HETATM 11 O O1A GTP . . . AA 3 220.59 173.524 273.677 1 74.9 ? O1A GTP 1202 P 1 
HETATM 12 O O2A GTP . . . AA 3 218.388 172.496 273.91 1 68 ? O2A GTP 1202 P 1 
HETATM 13 O O5' GTP . . . AA 3 218.674 174.9 274.656 1 39.4 ? O5' GTP 1202 P 1 
HETATM 14 C C5' GTP . . . AA 3 218.939 174.674 276.023 1 49.1 ? C5' GTP 1202 P 1 
HETATM 15 C C4' GTP . . . AA 3 217.658 174.457 276.809 1 53.57 ? C4' GTP 1202 P 1 
HETATM 16 O O4' GTP . . . AA 3 216.688 173.829 276.013 1 52.83 ? O4' GTP 1202 P 1 
HETATM 17 C C3' GTP . . . AA 3 217.844 173.526 277.987 1 55.45 ? C3' GTP 1202 P 1 
HETATM 18 O O3' GTP . . . AA 3 217.993 174.284 279.159 1 56.11 ? O3' GTP 1202 P 1 
HETATM 19 C C2' GTP . . . AA 3 216.562 172.734 278.065 1 56.92 ? C2' GTP 1202 P 1 
HETATM 20 O O2' GTP . . . AA 3 215.885 173.089 279.243 1 59.9 ? O2' GTP 1202 P 1 
HETATM 21 C C1' GTP . . . AA 3 215.765 173.184 276.859 1 54.02 ? C1' GTP 1202 P 1 
HETATM 22 N N9 GTP . . . AA 3 215.147 172.102 276.085 1 52.61 ? N9 GTP 1202 P 1 
HETATM 23 C C8 GTP . . . AA 3 215.73 171.456 275.04 1 54.37 ? C8 GTP 1202 P 1 
HETATM 24 N N7 GTP . . . AA 3 214.86 170.563 274.539 1 59.49 ? N7 GTP 1202 P 1 
HETATM 25 C C5 GTP . . . AA 3 213.718 170.646 275.237 1 58.7 ? C5 GTP 1202 P 1 
HETATM 26 C C6 GTP . . . AA 3 212.531 169.959 275.126 1 58.85 ? C6 GTP 1202 P 1 
HETATM 27 O O6 GTP . . . AA 3 212.395 169.095 274.266 1 65.48 ? O6 GTP 1202 P 1 
HETATM 28 N N1 GTP . . . AA 3 211.501 170.24 275.982 1 49.18 ? N1 GTP 1202 P 1 
HETATM 29 C C2 GTP . . . AA 3 211.67 171.206 276.938 1 52.95 ? C2 GTP 1202 P 1 
HETATM 30 N N2 GTP . . . AA 3 210.673 171.47 277.759 1 59.17 ? N2 GTP 1202 P 1 
HETATM 31 N N3 GTP . . . AA 3 212.856 171.894 277.049 1 50.14 ? N3 GTP 1202 P 1 
HETATM 32 C C4 GTP . . . AA 3 213.873 171.616 276.207 1 52.65 ? C4 GTP 1202 P 1 
#
_model_server_stats.io_time_ms              47 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    123 
_model_server_stats.query_time_ms           640 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           32 
#