data_9C85
#
_model_server_result.job_id            uYTdFqzqCKoGjiHayinvNg 
_model_server_result.datetime_utc      '2025-06-21 20:14:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9c85 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":703}' 
#
_entry.id    9C85 
#
_exptl.entry_id    9C85 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            9C85 
_cell.length_a            178.74 
_cell.length_b            178.74 
_cell.length_c            185.49 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9C85 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        181 
_symmetry.space_group_name_Hall    'P 64 2 (x,y,z+1/6)' 
_symmetry.space_group_name_H-M     'P 64 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 -89.37 154.793381 0 
3 'crystal symmetry operation' 9_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -61.83 
4 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -89.37 154.793381 -61.83 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C PRO 254 A PRO 339 1_555 A N CSD 255 A CSD 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
covale ? covale2 A C CSD 255 A CSD 340 1_555 A N ASP 256 A ASP 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
metalc ? metalc1 A OD1 ASP 453 A ASP 538 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? 
metalc ? metalc2 A OD1 ASN 480 A ASN 565 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? 
metalc ? metalc3 A O HIS 482 A HIS 567 1_555 B MG MG . A MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? 
metalc ? metalc4 B MG MG . A MG 701 1_555 E OAK AUJ . A AUJ 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.886 ? 
metalc ? metalc5 B MG MG . A MG 701 1_555 E OAT AUJ . A AUJ 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? 
metalc ? metalc6 B MG MG . A MG 701 1_555 E OAF AUJ . A AUJ 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.888 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 200 n n 
PA O2A FAD sing 201 n n 
PA O5B FAD sing 202 n n 
PA O3P FAD sing 203 n n 
O2A HOA2 FAD sing 204 n n 
O5B C5B FAD sing 205 n n 
C5B C4B FAD sing 206 n n 
C5B H51A FAD sing 207 n n 
C5B H52A FAD sing 208 n n 
C4B O4B FAD sing 209 n n 
C4B C3B FAD sing 210 n n 
C4B H4B FAD sing 211 n n 
O4B C1B FAD sing 212 n n 
C3B O3B FAD sing 213 n n 
C3B C2B FAD sing 214 n n 
C3B H3B FAD sing 215 n n 
O3B HO3A FAD sing 216 n n 
C2B O2B FAD sing 217 n n 
C2B C1B FAD sing 218 n n 
C2B H2B FAD sing 219 n n 
O2B HO2A FAD sing 220 n n 
C1B N9A FAD sing 221 n n 
C1B H1B FAD sing 222 n n 
N9A C8A FAD sing 223 n y 
N9A C4A FAD sing 224 n y 
C8A N7A FAD doub 225 n y 
C8A H8A FAD sing 226 n n 
N7A C5A FAD sing 227 n y 
C5A C6A FAD sing 228 n y 
C5A C4A FAD doub 229 n y 
C6A N6A FAD sing 230 n n 
C6A N1A FAD doub 231 n y 
N6A H61A FAD sing 232 n n 
N6A H62A FAD sing 233 n n 
N1A C2A FAD sing 234 n y 
C2A N3A FAD doub 235 n y 
C2A H2A FAD sing 236 n n 
N3A C4A FAD sing 237 n y 
N1 C2 FAD sing 238 n n 
N1 C10 FAD doub 239 n n 
C2 O2 FAD doub 240 n n 
C2 N3 FAD sing 241 n n 
N3 C4 FAD sing 242 n n 
N3 HN3 FAD sing 243 n n 
C4 O4 FAD doub 244 n n 
C4 C4X FAD sing 245 n n 
C4X N5 FAD doub 246 n n 
C4X C10 FAD sing 247 n n 
N5 C5X FAD sing 248 n n 
C5X C6 FAD doub 249 n y 
C5X C9A FAD sing 250 n y 
C6 C7 FAD sing 251 n y 
C6 H6 FAD sing 252 n n 
C7 C7M FAD sing 253 n n 
C7 C8 FAD doub 254 n y 
C7M HM71 FAD sing 255 n n 
C7M HM72 FAD sing 256 n n 
C7M HM73 FAD sing 257 n n 
C8 C8M FAD sing 258 n n 
C8 C9 FAD sing 259 n y 
C8M HM81 FAD sing 260 n n 
C8M HM82 FAD sing 261 n n 
C8M HM83 FAD sing 262 n n 
C9 C9A FAD doub 263 n y 
C9 H9 FAD sing 264 n n 
C9A N10 FAD sing 265 n n 
N10 C10 FAD sing 266 n n 
N10 C1' FAD sing 267 n n 
C1' C2' FAD sing 268 n n 
C1' "H1'1" FAD sing 269 n n 
C1' "H1'2" FAD sing 270 n n 
C2' O2' FAD sing 271 n n 
C2' C3' FAD sing 272 n n 
C2' H2' FAD sing 273 n n 
O2' HO2' FAD sing 274 n n 
C3' O3' FAD sing 275 n n 
C3' C4' FAD sing 276 n n 
C3' H3' FAD sing 277 n n 
O3' HO3' FAD sing 278 n n 
C4' O4' FAD sing 279 n n 
C4' C5' FAD sing 280 n n 
C4' H4' FAD sing 281 n n 
O4' HO4' FAD sing 282 n n 
C5' O5' FAD sing 283 n n 
C5' "H5'1" FAD sing 284 n n 
C5' "H5'2" FAD sing 285 n n 
O5' P FAD sing 286 n n 
P O1P FAD doub 287 n n 
P O2P FAD sing 288 n n 
P O3P FAD sing 289 n n 
O2P HOP2 FAD sing 290 n n 
#
_atom_sites.entry_id                     9C85 
_atom_sites.fract_transf_matrix[1][1]    0.005595 
_atom_sites.fract_transf_matrix[1][2]    0.00323 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00646 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005391 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 701 701 MG MG . 
C 3 A1AU7 A 1 702 708 A1AU7 LS5 . 
D 4 FAD A 1 703 702 FAD FAD . 
E 5 AUJ A 1 704 704 AUJ THP . 
F 6 NHE A 1 705 709 NHE CHE . 
G 7 SO4 A 1 706 1 SO4 SO4 . 
H 7 SO4 A 1 707 5 SO4 SO4 . 
I 8 HOH A 1 801 1 HOH HOH . 
I 8 HOH A 2 802 14 HOH HOH . 
I 8 HOH A 3 803 10 HOH HOH . 
I 8 HOH A 4 804 11 HOH HOH . 
I 8 HOH A 5 805 21 HOH HOH . 
I 8 HOH A 6 806 5 HOH HOH . 
I 8 HOH A 7 807 9 HOH HOH . 
I 8 HOH A 8 808 18 HOH HOH . 
I 8 HOH A 9 809 16 HOH HOH . 
I 8 HOH A 10 810 13 HOH HOH . 
I 8 HOH A 11 811 15 HOH HOH . 
I 8 HOH A 12 812 12 HOH HOH . 
I 8 HOH A 13 813 4 HOH HOH . 
I 8 HOH A 14 814 6 HOH HOH . 
I 8 HOH A 15 815 7 HOH HOH . 
I 8 HOH A 16 816 3 HOH HOH . 
I 8 HOH A 17 817 22 HOH HOH . 
I 8 HOH A 18 818 2 HOH HOH . 
I 8 HOH A 19 819 20 HOH HOH . 
I 8 HOH A 20 820 19 HOH HOH . 
I 8 HOH A 21 821 8 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . D 4 -57.954 67.802 -8.862 1 48.45 ? PA FAD 703 A 1 
HETATM 2 O O1A FAD . . . D 4 -58.616 66.546 -8.287 1 47.59 -1 O1A FAD 703 A 1 
HETATM 3 O O2A FAD . . . D 4 -58.429 68.245 -10.257 1 53.39 ? O2A FAD 703 A 1 
HETATM 4 O O5B FAD . . . D 4 -56.274 67.656 -8.768 1 60.27 ? O5B FAD 703 A 1 
HETATM 5 C C5B FAD . . . D 4 -55.678 66.945 -7.688 1 55.27 ? C5B FAD 703 A 1 
HETATM 6 C C4B FAD . . . D 4 -54.658 67.745 -7.138 1 52.06 ? C4B FAD 703 A 1 
HETATM 7 O O4B FAD . . . D 4 -53.801 66.883 -6.26 1 53.49 ? O4B FAD 703 A 1 
HETATM 8 C C3B FAD . . . D 4 -53.635 68.36 -8.187 1 53.15 ? C3B FAD 703 A 1 
HETATM 9 O O3B FAD . . . D 4 -53.147 69.633 -7.547 1 52.21 ? O3B FAD 703 A 1 
HETATM 10 C C2B FAD . . . D 4 -52.557 67.272 -8.253 1 54.23 ? C2B FAD 703 A 1 
HETATM 11 O O2B FAD . . . D 4 -51.19 67.8 -8.412 1 52.95 ? O2B FAD 703 A 1 
HETATM 12 C C1B FAD . . . D 4 -52.592 66.707 -6.708 1 56.37 ? C1B FAD 703 A 1 
HETATM 13 N N9A FAD . . . D 4 -52.233 65.328 -6.494 1 54.35 ? N9A FAD 703 A 1 
HETATM 14 C C8A FAD . . . D 4 -52.511 64.315 -7.268 1 52.13 ? C8A FAD 703 A 1 
HETATM 15 N N7A FAD . . . D 4 -52.024 63.218 -6.715 1 50.02 ? N7A FAD 703 A 1 
HETATM 16 C C5A FAD . . . D 4 -51.429 63.532 -5.535 1 53.36 ? C5A FAD 703 A 1 
HETATM 17 C C6A FAD . . . D 4 -50.765 62.816 -4.493 1 53.34 ? C6A FAD 703 A 1 
HETATM 18 N N6A FAD . . . D 4 -50.586 61.376 -4.519 1 51.29 ? N6A FAD 703 A 1 
HETATM 19 N N1A FAD . . . D 4 -50.305 63.498 -3.466 1 56.93 ? N1A FAD 703 A 1 
HETATM 20 C C2A FAD . . . D 4 -50.454 64.825 -3.354 1 59.07 ? C2A FAD 703 A 1 
HETATM 21 N N3A FAD . . . D 4 -51.077 65.52 -4.309 1 54.41 ? N3A FAD 703 A 1 
HETATM 22 C C4A FAD . . . D 4 -51.573 64.889 -5.397 1 53.17 ? C4A FAD 703 A 1 
HETATM 23 N N1 FAD . . . D 4 -65.892 71.285 -7.357 1 57.31 ? N1 FAD 703 A 1 
HETATM 24 C C2 FAD . . . D 4 -66.109 71.469 -6.06 1 54.41 ? C2 FAD 703 A 1 
HETATM 25 O O2 FAD . . . D 4 -65.208 70.921 -5.186 1 51.94 ? O2 FAD 703 A 1 
HETATM 26 N N3 FAD . . . D 4 -67.156 72.141 -5.575 1 57.72 ? N3 FAD 703 A 1 
HETATM 27 C C4 FAD . . . D 4 -68.074 72.646 -6.397 1 59.18 ? C4 FAD 703 A 1 
HETATM 28 O O4 FAD . . . D 4 -69.192 73.336 -5.896 1 53.8 ? O4 FAD 703 A 1 
HETATM 29 C C4X FAD . . . D 4 -67.914 72.479 -7.786 1 57 ? C4X FAD 703 A 1 
HETATM 30 N N5 FAD . . . D 4 -68.814 72.984 -8.674 1 54.46 ? N5 FAD 703 A 1 
HETATM 31 C C5X FAD . . . D 4 -68.809 72.441 -9.922 1 57.76 ? C5X FAD 703 A 1 
HETATM 32 C C6 FAD . . . D 4 -69.947 72.605 -10.755 1 56.29 ? C6 FAD 703 A 1 
HETATM 33 C C7 FAD . . . D 4 -69.923 72.038 -12.038 1 55.62 ? C7 FAD 703 A 1 
HETATM 34 C C7M FAD . . . D 4 -71.116 72.159 -12.971 1 45.92 ? C7M FAD 703 A 1 
HETATM 35 C C8 FAD . . . D 4 -68.8 71.33 -12.486 1 53.96 ? C8 FAD 703 A 1 
HETATM 36 C C8M FAD . . . D 4 -68.82 70.678 -13.863 1 47.47 ? C8M FAD 703 A 1 
HETATM 37 C C9 FAD . . . D 4 -67.684 71.178 -11.66 1 52.33 ? C9 FAD 703 A 1 
HETATM 38 C C9A FAD . . . D 4 -67.686 71.743 -10.372 1 57.73 ? C9A FAD 703 A 1 
HETATM 39 N N10 FAD . . . D 4 -66.591 71.602 -9.545 1 58.23 ? N10 FAD 703 A 1 
HETATM 40 C C10 FAD . . . D 4 -66.786 71.787 -8.228 1 58.48 ? C10 FAD 703 A 1 
HETATM 41 C C1' FAD . . . D 4 -65.424 70.793 -9.955 1 57.03 ? C1' FAD 703 A 1 
HETATM 42 C C2' FAD . . . D 4 -64.207 71.721 -10.252 1 54.12 ? C2' FAD 703 A 1 
HETATM 43 O O2' FAD . . . D 4 -64.296 72.624 -11.339 1 55.22 ? O2' FAD 703 A 1 
HETATM 44 C C3' FAD . . . D 4 -62.846 71.044 -10.032 1 54.17 ? C3' FAD 703 A 1 
HETATM 45 O O3' FAD . . . D 4 -62.879 69.932 -10.852 1 53.32 ? O3' FAD 703 A 1 
HETATM 46 C C4' FAD . . . D 4 -62.671 70.668 -8.539 1 56.11 ? C4' FAD 703 A 1 
HETATM 47 O O4' FAD . . . D 4 -63.011 71.714 -7.678 1 58.73 ? O4' FAD 703 A 1 
HETATM 48 C C5' FAD . . . D 4 -61.159 70.478 -8.401 1 49.47 ? C5' FAD 703 A 1 
HETATM 49 O O5' FAD . . . D 4 -60.923 69.295 -7.654 1 56.77 ? O5' FAD 703 A 1 
HETATM 50 P P FAD . . . D 4 -59.503 69.236 -6.832 1 52.79 ? P FAD 703 A 1 
HETATM 51 O O1P FAD . . . D 4 -59.311 70.522 -6.122 1 47.26 -1 O1P FAD 703 A 1 
HETATM 52 O O2P FAD . . . D 4 -59.567 68.083 -5.905 1 50.84 ? O2P FAD 703 A 1 
HETATM 53 O O3P FAD . . . D 4 -58.203 69.068 -7.799 1 58.22 ? O3P FAD 703 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           53 
#