data_9C9V # _model_server_result.job_id ydMTzUhJ8K-dKXvTtRxJ6Q _model_server_result.datetime_utc '2025-04-24 05:19:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9c9v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":201}' # _entry.id 9C9V # _exptl.entry_id 9C9V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 415.888 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N'-(3-chloro-4-fluorophenyl)-N-(2-methylpropyl)-N-[(1R)-1-(1-oxo-1,2-dihydroisoquinolin-4-yl)ethyl]urea" _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.748 _cell.angle_gamma 90 _cell.entry_id 9C9V _cell.length_a 151.944 _cell.length_b 87.919 _cell.length_c 108.503 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9C9V _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H 1 1 C,D,I,J 2 1 E,F,K,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 64 A CYS 61 1_555 B SG CYS 64 B CYS 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? disulf ? disulf2 C SG CYS 64 C CYS 61 1_555 D SG CYS 64 D CYS 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf3 E SG CYS 64 E CYS 61 1_555 F SG CYS 64 F CYS 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? # _chem_comp.formula 'C22 H23 Cl F N3 O2' _chem_comp.formula_weight 415.888 _chem_comp.id A1AVK _chem_comp.mon_nstd_flag . _chem_comp.name "N'-(3-chloro-4-fluorophenyl)-N-(2-methylpropyl)-N-[(1R)-1-(1-oxo-1,2-dihydroisoquinolin-4-yl)ethyl]urea" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C8 A1AVK doub 1 n n C10 C11 A1AVK sing 2 n y C10 C9 A1AVK doub 3 n y C11 C12 A1AVK doub 4 n y C8 C9 A1AVK sing 5 n n C8 N1 A1AVK sing 6 n n C9 C14 A1AVK sing 7 n y C12 C13 A1AVK sing 8 n y N1 C7 A1AVK sing 9 n n C2 C1 A1AVK sing 10 n n C14 C13 A1AVK doub 11 n y C14 C6 A1AVK sing 12 n n C7 C6 A1AVK doub 13 n n C C1 A1AVK sing 14 n n C1 C3 A1AVK sing 15 n n C6 C4 A1AVK sing 16 n n C3 N A1AVK sing 17 n n C4 N A1AVK sing 18 n n C4 C5 A1AVK sing 19 n n N C15 A1AVK sing 20 n n C18 C17 A1AVK sing 21 n y C18 C19 A1AVK doub 22 n y C17 C16 A1AVK doub 23 n y O1 C15 A1AVK doub 24 n n C15 N2 A1AVK sing 25 n n C19 F A1AVK sing 26 n n C19 C20 A1AVK sing 27 n y C16 N2 A1AVK sing 28 n n C16 C21 A1AVK sing 29 n y C20 C21 A1AVK doub 30 n y C20 CL A1AVK sing 31 n n C10 H1 A1AVK sing 32 n n C11 H2 A1AVK sing 33 n n C12 H3 A1AVK sing 34 n n C13 H4 A1AVK sing 35 n n C7 H5 A1AVK sing 36 n n C4 H7 A1AVK sing 37 n n C5 H8 A1AVK sing 38 n n C5 H9 A1AVK sing 39 n n C5 H10 A1AVK sing 40 n n C3 H11 A1AVK sing 41 n n C3 H12 A1AVK sing 42 n n C1 H13 A1AVK sing 43 n n C H14 A1AVK sing 44 n n C H15 A1AVK sing 45 n n C H16 A1AVK sing 46 n n C2 H17 A1AVK sing 47 n n C2 H18 A1AVK sing 48 n n C2 H19 A1AVK sing 49 n n N2 H20 A1AVK sing 50 n n C21 H21 A1AVK sing 51 n n C17 H22 A1AVK sing 52 n n C18 H23 A1AVK sing 53 n n N1 H24 A1AVK sing 54 n n # _atom_sites.entry_id 9C9V _atom_sites.fract_transf_matrix[1][1] 0.006581 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001489 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011374 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009449 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 A1AVK A 1 201 409 A1AVK Ar9 . H 2 A1AVK B 1 201 409 A1AVK Ar9 . I 2 A1AVK C 1 201 409 A1AVK Ar9 . J 2 A1AVK D 1 201 409 A1AVK Ar9 . K 2 A1AVK E 1 201 409 A1AVK Ar9 . L 2 A1AVK F 1 201 409 A1AVK Ar9 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O A1AVK . . . G 2 143.224 -57.058 128.372 1 54.19 ? O A1AVK 201 A 1 HETATM 2 C C8 A1AVK . . . G 2 143.787 -57.075 129.469 1 50.96 ? C8 A1AVK 201 A 1 HETATM 3 C C9 A1AVK . . . G 2 145.122 -56.45 129.617 1 54.71 ? C9 A1AVK 201 A 1 HETATM 4 C C10 A1AVK . . . G 2 145.78 -55.788 128.555 1 58.62 ? C10 A1AVK 201 A 1 HETATM 5 C C11 A1AVK . . . G 2 146.997 -55.162 128.741 1 51.98 ? C11 A1AVK 201 A 1 HETATM 6 C C12 A1AVK . . . G 2 147.561 -55.237 130.007 1 55.28 ? C12 A1AVK 201 A 1 HETATM 7 C C13 A1AVK . . . G 2 146.954 -55.908 131.101 1 52.15 ? C13 A1AVK 201 A 1 HETATM 8 C C14 A1AVK . . . G 2 145.726 -56.52 130.965 1 52.77 ? C14 A1AVK 201 A 1 HETATM 9 N N1 A1AVK . . . G 2 143.184 -57.684 130.509 1 54 ? N1 A1AVK 201 A 1 HETATM 10 C C7 A1AVK . . . G 2 143.704 -57.783 131.743 1 51.64 ? C7 A1AVK 201 A 1 HETATM 11 C C6 A1AVK . . . G 2 144.958 -57.239 132.054 1 56 ? C6 A1AVK 201 A 1 HETATM 12 C C4 A1AVK . . . G 2 145.516 -57.375 133.444 1 59.07 ? C4 A1AVK 201 A 1 HETATM 13 C C5 A1AVK . . . G 2 144.447 -57.666 134.492 1 53.55 ? C5 A1AVK 201 A 1 HETATM 14 N N A1AVK . . . G 2 146.608 -58.398 133.623 1 59.79 ? N A1AVK 201 A 1 HETATM 15 C C3 A1AVK . . . G 2 146.329 -59.734 133.141 1 50.4 ? C3 A1AVK 201 A 1 HETATM 16 C C1 A1AVK . . . G 2 147.255 -60.075 132.002 1 45.83 ? C1 A1AVK 201 A 1 HETATM 17 C C A1AVK . . . G 2 147.25 -61.595 131.895 1 49.08 ? C A1AVK 201 A 1 HETATM 18 C C2 A1AVK . . . G 2 146.862 -59.576 130.622 1 42.79 ? C2 A1AVK 201 A 1 HETATM 19 C C15 A1AVK . . . G 2 147.749 -58.024 134.217 1 67.2 ? C15 A1AVK 201 A 1 HETATM 20 O O1 A1AVK . . . G 2 148.138 -56.856 134.081 1 57.77 ? O1 A1AVK 201 A 1 HETATM 21 N N2 A1AVK . . . G 2 148.56 -58.946 134.771 1 72.1 ? N2 A1AVK 201 A 1 HETATM 22 C C16 A1AVK . . . G 2 149.949 -58.838 134.633 1 65.27 ? C16 A1AVK 201 A 1 HETATM 23 C C21 A1AVK . . . G 2 150.739 -59.587 135.489 1 62.42 ? C21 A1AVK 201 A 1 HETATM 24 C C20 A1AVK . . . G 2 152.105 -59.428 135.462 1 69.63 ? C20 A1AVK 201 A 1 HETATM 25 CL CL A1AVK . . . G 2 153.193 -60.353 136.542 1 77.79 ? CL A1AVK 201 A 1 HETATM 26 C C17 A1AVK . . . G 2 150.604 -57.939 133.772 1 58.43 ? C17 A1AVK 201 A 1 HETATM 27 C C18 A1AVK . . . G 2 151.963 -57.782 133.769 1 56.17 ? C18 A1AVK 201 A 1 HETATM 28 C C19 A1AVK . . . G 2 152.705 -58.545 134.616 1 61.78 ? C19 A1AVK 201 A 1 HETATM 29 F F A1AVK . . . G 2 154.027 -58.485 134.669 1 57.5 ? F A1AVK 201 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 29 #