data_9CBF # _model_server_result.job_id oXSHvrayGrIqKaZL1TnCog _model_server_result.datetime_utc '2024-11-08 06:52:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9cbf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":709}' # _entry.id 9CBF # _exptl.entry_id 9CBF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9CBF _cell.length_a 80.411 _cell.length_b 80.411 _cell.length_c 236.953 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9CBF _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 172 A ASP 172 1_555 H K K . A K 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.825 ? metalc ? metalc2 A OD1 ASP 172 A ASP 172 1_555 H K K . A K 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.884 ? metalc ? metalc3 A O ASP 174 A ASP 174 1_555 H K K . A K 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.619 ? metalc ? metalc4 A OD1 ASP 174 A ASP 174 1_555 J ZN ZN . A ZN 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? metalc ? metalc5 A OD2 ASP 174 A ASP 174 1_555 J ZN ZN . A ZN 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc6 A O HIS 176 A HIS 176 1_555 H K K . A K 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.658 ? metalc ? metalc7 A ND1 HIS 176 A HIS 176 1_555 J ZN ZN . A ZN 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc8 A O PHE 185 A PHE 185 1_555 I K K . A K 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc9 A O ASP 188 A ASP 188 1_555 I K K . A K 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? metalc ? metalc10 A O VAL 191 A VAL 191 1_555 I K K . A K 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc11 A OG SER 195 A SER 195 1_555 H K K . A K 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? metalc ? metalc12 A O TRP 196 A TRP 196 1_555 H K K . A K 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc13 A O PHE 224 A PHE 224 1_555 I K K . A K 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.715 ? metalc ? metalc14 A OD2 ASP 267 A ASP 267 1_555 J ZN ZN . A ZN 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc15 E S10 A1AVR . A A1AVR 704 1_555 J ZN ZN . A ZN 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc16 I K K . A K 708 1_555 K O HOH . A HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.82 ? metalc ? metalc17 I K K . A K 708 1_555 K O HOH . A HOH 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.047 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9CBF _atom_sites.fract_transf_matrix[1][1] 0.012436 _atom_sites.fract_transf_matrix[1][2] 0.00718 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01436 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00422 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 701 701 EDO EDO . C 2 EDO A 1 702 702 EDO EDO . D 2 EDO A 1 703 703 EDO EDO . E 3 A1AVR A 1 704 704 A1AVR M1T . F 4 PO4 A 1 705 1 PO4 PO4 . G 4 PO4 A 1 706 2 PO4 PO4 . H 5 K A 1 707 1 K K . I 5 K A 1 708 2 K K . J 6 ZN A 1 709 1 ZN ZN . K 7 HOH A 1 801 18 HOH HOH . K 7 HOH A 2 802 4 HOH HOH . K 7 HOH A 3 803 2 HOH HOH . K 7 HOH A 4 804 12 HOH HOH . K 7 HOH A 5 805 10 HOH HOH . K 7 HOH A 6 806 9 HOH HOH . K 7 HOH A 7 807 8 HOH HOH . K 7 HOH A 8 808 11 HOH HOH . K 7 HOH A 9 809 1 HOH HOH . K 7 HOH A 10 810 13 HOH HOH . K 7 HOH A 11 811 7 HOH HOH . K 7 HOH A 12 812 6 HOH HOH . K 7 HOH A 13 813 5 HOH HOH . K 7 HOH A 14 814 16 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 6 _atom_site.Cartn_x 41.827 _atom_site.Cartn_y 1.156 _atom_site.Cartn_z -8.873 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 70.29 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 709 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 38 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #