data_9CD7
#
_model_server_result.job_id            9HPUUOtrySa4Lv3GFI6jKA 
_model_server_result.datetime_utc      '2024-10-20 19:40:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9cd7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"S","auth_seq_id":802}' 
#
_entry.id    9CD7 
#
_exptl.entry_id    9CD7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          127.452 
_cell.angle_gamma         90 
_cell.entry_id            9CD7 
_cell.length_a            180.686 
_cell.length_b            55.588 
_cell.length_c            138.668 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9CD7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,AA 1 1 
B,I,J,K,L,M,N,O,P,Q,BA 2 1 
C,R,S,T,U,V,W,X,Y,Z,CA 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 195 n n 
C1 C2 GOL sing 196 n n 
C1 H11 GOL sing 197 n n 
C1 H12 GOL sing 198 n n 
O1 HO1 GOL sing 199 n n 
C2 O2 GOL sing 200 n n 
C2 C3 GOL sing 201 n n 
C2 H2 GOL sing 202 n n 
O2 HO2 GOL sing 203 n n 
C3 O3 GOL sing 204 n n 
C3 H31 GOL sing 205 n n 
C3 H32 GOL sing 206 n n 
O3 HO3 GOL sing 207 n n 
#
_atom_sites.entry_id                     9CD7 
_atom_sites.fract_transf_matrix[1][1]    0.005534 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004239 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017989 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009084 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 A1AV2 A 1 801 800 A1AV2 300 . 
E 3 GOL A 1 802 802 GOL GOL . 
F 3 GOL A 1 803 803 GOL GOL . 
G 3 GOL A 1 804 804 GOL GOL . 
H 3 GOL A 1 805 805 GOL GOL . 
I 2 A1AV2 B 1 801 800 A1AV2 300 . 
J 3 GOL B 1 802 802 GOL GOL . 
K 3 GOL B 1 803 803 GOL GOL . 
L 3 GOL B 1 804 804 GOL GOL . 
M 3 GOL B 1 805 805 GOL GOL . 
N 3 GOL B 1 806 806 GOL GOL . 
O 3 GOL B 1 807 807 GOL GOL . 
P 4 SO4 B 1 808 1 SO4 SO4 . 
Q 4 SO4 B 1 809 3 SO4 SO4 . 
R 2 A1AV2 C 1 801 800 A1AV2 300 . 
S 3 GOL C 1 802 802 GOL GOL . 
T 3 GOL C 1 803 803 GOL GOL . 
U 3 GOL C 1 804 804 GOL GOL . 
V 3 GOL C 1 805 805 GOL GOL . 
W 3 GOL C 1 806 806 GOL GOL . 
X 3 GOL C 1 807 807 GOL GOL . 
Y 4 SO4 C 1 808 2 SO4 SO4 . 
Z 4 SO4 C 1 809 4 SO4 SO4 . 
AA 5 HOH A 1 901 6 HOH HOH . 
AA 5 HOH A 2 902 129 HOH HOH . 
AA 5 HOH A 3 903 119 HOH HOH . 
AA 5 HOH A 4 904 123 HOH HOH . 
AA 5 HOH A 5 905 62 HOH HOH . 
AA 5 HOH A 6 906 65 HOH HOH . 
AA 5 HOH A 7 907 10 HOH HOH . 
AA 5 HOH A 8 908 33 HOH HOH . 
AA 5 HOH A 9 909 16 HOH HOH . 
AA 5 HOH A 10 910 20 HOH HOH . 
AA 5 HOH A 11 911 67 HOH HOH . 
AA 5 HOH A 12 912 15 HOH HOH . 
AA 5 HOH A 13 913 118 HOH HOH . 
AA 5 HOH A 14 914 70 HOH HOH . 
AA 5 HOH A 15 915 46 HOH HOH . 
AA 5 HOH A 16 916 128 HOH HOH . 
AA 5 HOH A 17 917 127 HOH HOH . 
AA 5 HOH A 18 918 80 HOH HOH . 
AA 5 HOH A 19 919 115 HOH HOH . 
AA 5 HOH A 20 920 91 HOH HOH . 
AA 5 HOH A 21 921 9 HOH HOH . 
AA 5 HOH A 22 922 112 HOH HOH . 
AA 5 HOH A 23 923 66 HOH HOH . 
AA 5 HOH A 24 924 17 HOH HOH . 
AA 5 HOH A 25 925 78 HOH HOH . 
AA 5 HOH A 26 926 114 HOH HOH . 
AA 5 HOH A 27 927 53 HOH HOH . 
AA 5 HOH A 28 928 42 HOH HOH . 
AA 5 HOH A 29 929 19 HOH HOH . 
AA 5 HOH A 30 930 25 HOH HOH . 
AA 5 HOH A 31 931 51 HOH HOH . 
AA 5 HOH A 32 932 63 HOH HOH . 
AA 5 HOH A 33 933 18 HOH HOH . 
AA 5 HOH A 34 934 22 HOH HOH . 
AA 5 HOH A 35 935 47 HOH HOH . 
AA 5 HOH A 36 936 48 HOH HOH . 
AA 5 HOH A 37 937 31 HOH HOH . 
AA 5 HOH A 38 938 26 HOH HOH . 
AA 5 HOH A 39 939 64 HOH HOH . 
AA 5 HOH A 40 940 106 HOH HOH . 
AA 5 HOH A 41 941 50 HOH HOH . 
AA 5 HOH A 42 942 14 HOH HOH . 
AA 5 HOH A 43 943 43 HOH HOH . 
AA 5 HOH A 44 944 49 HOH HOH . 
AA 5 HOH A 45 945 116 HOH HOH . 
AA 5 HOH A 46 946 12 HOH HOH . 
AA 5 HOH A 47 947 79 HOH HOH . 
AA 5 HOH A 48 948 68 HOH HOH . 
AA 5 HOH A 49 949 28 HOH HOH . 
AA 5 HOH A 50 950 11 HOH HOH . 
AA 5 HOH A 51 951 69 HOH HOH . 
AA 5 HOH A 52 952 45 HOH HOH . 
AA 5 HOH A 53 953 117 HOH HOH . 
AA 5 HOH A 54 954 29 HOH HOH . 
AA 5 HOH A 55 955 113 HOH HOH . 
BA 5 HOH B 1 901 96 HOH HOH . 
BA 5 HOH B 2 902 81 HOH HOH . 
BA 5 HOH B 3 903 95 HOH HOH . 
BA 5 HOH B 4 904 89 HOH HOH . 
BA 5 HOH B 5 905 55 HOH HOH . 
BA 5 HOH B 6 906 99 HOH HOH . 
BA 5 HOH B 7 907 74 HOH HOH . 
BA 5 HOH B 8 908 44 HOH HOH . 
BA 5 HOH B 9 909 92 HOH HOH . 
BA 5 HOH B 10 910 87 HOH HOH . 
BA 5 HOH B 11 911 85 HOH HOH . 
BA 5 HOH B 12 912 5 HOH HOH . 
BA 5 HOH B 13 913 34 HOH HOH . 
BA 5 HOH B 14 914 103 HOH HOH . 
BA 5 HOH B 15 915 8 HOH HOH . 
BA 5 HOH B 16 916 86 HOH HOH . 
BA 5 HOH B 17 917 32 HOH HOH . 
BA 5 HOH B 18 918 97 HOH HOH . 
BA 5 HOH B 19 919 3 HOH HOH . 
BA 5 HOH B 20 920 124 HOH HOH . 
BA 5 HOH B 21 921 122 HOH HOH . 
BA 5 HOH B 22 922 30 HOH HOH . 
BA 5 HOH B 23 923 21 HOH HOH . 
BA 5 HOH B 24 924 72 HOH HOH . 
BA 5 HOH B 25 925 88 HOH HOH . 
BA 5 HOH B 26 926 84 HOH HOH . 
BA 5 HOH B 27 927 93 HOH HOH . 
BA 5 HOH B 28 928 73 HOH HOH . 
BA 5 HOH B 29 929 2 HOH HOH . 
BA 5 HOH B 30 930 90 HOH HOH . 
BA 5 HOH B 31 931 98 HOH HOH . 
BA 5 HOH B 32 932 71 HOH HOH . 
BA 5 HOH B 33 933 60 HOH HOH . 
BA 5 HOH B 34 934 4 HOH HOH . 
BA 5 HOH B 35 935 54 HOH HOH . 
BA 5 HOH B 36 936 23 HOH HOH . 
BA 5 HOH B 37 937 121 HOH HOH . 
BA 5 HOH B 38 938 7 HOH HOH . 
BA 5 HOH B 39 939 102 HOH HOH . 
BA 5 HOH B 40 940 13 HOH HOH . 
BA 5 HOH B 41 941 24 HOH HOH . 
BA 5 HOH B 42 942 82 HOH HOH . 
BA 5 HOH B 43 943 94 HOH HOH . 
BA 5 HOH B 44 944 52 HOH HOH . 
BA 5 HOH B 45 945 126 HOH HOH . 
BA 5 HOH B 46 946 83 HOH HOH . 
CA 5 HOH C 1 901 120 HOH HOH . 
CA 5 HOH C 2 902 41 HOH HOH . 
CA 5 HOH C 3 903 108 HOH HOH . 
CA 5 HOH C 4 904 61 HOH HOH . 
CA 5 HOH C 5 905 36 HOH HOH . 
CA 5 HOH C 6 906 56 HOH HOH . 
CA 5 HOH C 7 907 125 HOH HOH . 
CA 5 HOH C 8 908 76 HOH HOH . 
CA 5 HOH C 9 909 75 HOH HOH . 
CA 5 HOH C 10 910 27 HOH HOH . 
CA 5 HOH C 11 911 109 HOH HOH . 
CA 5 HOH C 12 912 77 HOH HOH . 
CA 5 HOH C 13 913 35 HOH HOH . 
CA 5 HOH C 14 914 130 HOH HOH . 
CA 5 HOH C 15 915 105 HOH HOH . 
CA 5 HOH C 16 916 101 HOH HOH . 
CA 5 HOH C 17 917 104 HOH HOH . 
CA 5 HOH C 18 918 110 HOH HOH . 
CA 5 HOH C 19 919 1 HOH HOH . 
CA 5 HOH C 20 920 100 HOH HOH . 
CA 5 HOH C 21 921 107 HOH HOH . 
CA 5 HOH C 22 922 58 HOH HOH . 
CA 5 HOH C 23 923 38 HOH HOH . 
CA 5 HOH C 24 924 59 HOH HOH . 
CA 5 HOH C 25 925 57 HOH HOH . 
CA 5 HOH C 26 926 40 HOH HOH . 
CA 5 HOH C 27 927 37 HOH HOH . 
CA 5 HOH C 28 928 111 HOH HOH . 
CA 5 HOH C 29 929 39 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . S 3 59.342 6.259 24.422 1 50.1 0 C1 GOL 802 C 1 
HETATM 2 O O1 GOL . . . S 3 59.487 7.308 23.465 1 48.59 0 O1 GOL 802 C 1 
HETATM 3 C C2 GOL . . . S 3 59.535 4.885 23.809 1 44.93 0 C2 GOL 802 C 1 
HETATM 4 O O2 GOL . . . S 3 60.916 4.527 23.825 1 42.62 0 O2 GOL 802 C 1 
HETATM 5 C C3 GOL . . . S 3 58.738 3.802 24.503 1 44.68 0 C3 GOL 802 C 1 
HETATM 6 O O3 GOL . . . S 3 59.227 2.502 24.176 1 48.69 0 O3 GOL 802 C 1 
#
_model_server_stats.io_time_ms              39 
_model_server_stats.parse_time_ms           55 
_model_server_stats.create_model_time_ms    42 
_model_server_stats.query_time_ms           368 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#