data_9CGB # _model_server_result.job_id Z61-XAHqTB4BPKuyfXbGqw _model_server_result.datetime_utc '2025-07-03 23:00:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9cgb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 9CGB # _exptl.entry_id 9CGB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 74.079 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-hydroxypropan-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9CGB _cell.length_a 76.03 _cell.length_b 76.03 _cell.length_c 76.14 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9CGB _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 50.76 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 109 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 106 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id CM1 _struct_conn.ptnr2_label_comp_id 4Y8 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 4Y8 _struct_conn.ptnr2_auth_seq_id 201 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.766 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H6 O2' _chem_comp.formula_weight 74.079 _chem_comp.id 4Y8 _chem_comp.mon_nstd_flag . _chem_comp.name 1-hydroxypropan-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C 4Y8 doub 1 n n C CM2 4Y8 sing 2 n n C CM1 4Y8 sing 3 n n CM1 O1 4Y8 sing 4 n n CM2 H1 4Y8 sing 5 n n CM2 H2 4Y8 sing 6 n n CM2 H3 4Y8 sing 7 n n CM1 H4 4Y8 sing 8 n n CM1 H5 4Y8 sing 9 n n O1 H6 4Y8 sing 10 n n # _atom_sites.entry_id 9CGB _atom_sites.fract_transf_matrix[1][1] 0.013153 _atom_sites.fract_transf_matrix[1][2] 0.007594 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013134 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4Y8 A 1 201 201 4Y8 LIG . C 3 HOH A 1 301 80 HOH HOH . C 3 HOH A 2 302 27 HOH HOH . C 3 HOH A 3 303 54 HOH HOH . C 3 HOH A 4 304 23 HOH HOH . C 3 HOH A 5 305 30 HOH HOH . C 3 HOH A 6 306 125 HOH HOH . C 3 HOH A 7 307 6 HOH HOH . C 3 HOH A 8 308 4 HOH HOH . C 3 HOH A 9 309 5 HOH HOH . C 3 HOH A 10 310 1 HOH HOH . C 3 HOH A 11 311 66 HOH HOH . C 3 HOH A 12 312 37 HOH HOH . C 3 HOH A 13 313 81 HOH HOH . C 3 HOH A 14 314 110 HOH HOH . C 3 HOH A 15 315 31 HOH HOH . C 3 HOH A 16 316 15 HOH HOH . C 3 HOH A 17 317 14 HOH HOH . C 3 HOH A 18 318 118 HOH HOH . C 3 HOH A 19 319 25 HOH HOH . C 3 HOH A 20 320 68 HOH HOH . C 3 HOH A 21 321 21 HOH HOH . C 3 HOH A 22 322 55 HOH HOH . C 3 HOH A 23 323 116 HOH HOH . C 3 HOH A 24 324 9 HOH HOH . C 3 HOH A 25 325 93 HOH HOH . C 3 HOH A 26 326 42 HOH HOH . C 3 HOH A 27 327 11 HOH HOH . C 3 HOH A 28 328 7 HOH HOH . C 3 HOH A 29 329 74 HOH HOH . C 3 HOH A 30 330 34 HOH HOH . C 3 HOH A 31 331 75 HOH HOH . C 3 HOH A 32 332 26 HOH HOH . C 3 HOH A 33 333 102 HOH HOH . C 3 HOH A 34 334 100 HOH HOH . C 3 HOH A 35 335 64 HOH HOH . C 3 HOH A 36 336 51 HOH HOH . C 3 HOH A 37 337 28 HOH HOH . C 3 HOH A 38 338 56 HOH HOH . C 3 HOH A 39 339 96 HOH HOH . C 3 HOH A 40 340 41 HOH HOH . C 3 HOH A 41 341 70 HOH HOH . C 3 HOH A 42 342 50 HOH HOH . C 3 HOH A 43 343 8 HOH HOH . C 3 HOH A 44 344 36 HOH HOH . C 3 HOH A 45 345 19 HOH HOH . C 3 HOH A 46 346 22 HOH HOH . C 3 HOH A 47 347 85 HOH HOH . C 3 HOH A 48 348 3 HOH HOH . C 3 HOH A 49 349 10 HOH HOH . C 3 HOH A 50 350 24 HOH HOH . C 3 HOH A 51 351 38 HOH HOH . C 3 HOH A 52 352 44 HOH HOH . C 3 HOH A 53 353 115 HOH HOH . C 3 HOH A 54 354 16 HOH HOH . C 3 HOH A 55 355 97 HOH HOH . C 3 HOH A 56 356 111 HOH HOH . C 3 HOH A 57 357 120 HOH HOH . C 3 HOH A 58 358 2 HOH HOH . C 3 HOH A 59 359 12 HOH HOH . C 3 HOH A 60 360 61 HOH HOH . C 3 HOH A 61 361 88 HOH HOH . C 3 HOH A 62 362 32 HOH HOH . C 3 HOH A 63 363 52 HOH HOH . C 3 HOH A 64 364 62 HOH HOH . C 3 HOH A 65 365 33 HOH HOH . C 3 HOH A 66 366 112 HOH HOH . C 3 HOH A 67 367 76 HOH HOH . C 3 HOH A 68 368 59 HOH HOH . C 3 HOH A 69 369 101 HOH HOH . C 3 HOH A 70 370 132 HOH HOH . C 3 HOH A 71 371 84 HOH HOH . C 3 HOH A 72 372 99 HOH HOH . C 3 HOH A 73 373 20 HOH HOH . C 3 HOH A 74 374 121 HOH HOH . C 3 HOH A 75 375 40 HOH HOH . C 3 HOH A 76 376 130 HOH HOH . C 3 HOH A 77 377 17 HOH HOH . C 3 HOH A 78 378 79 HOH HOH . C 3 HOH A 79 379 117 HOH HOH . C 3 HOH A 80 380 39 HOH HOH . C 3 HOH A 81 381 13 HOH HOH . C 3 HOH A 82 382 127 HOH HOH . C 3 HOH A 83 383 72 HOH HOH . C 3 HOH A 84 384 129 HOH HOH . C 3 HOH A 85 385 35 HOH HOH . C 3 HOH A 86 386 131 HOH HOH . C 3 HOH A 87 387 65 HOH HOH . C 3 HOH A 88 388 109 HOH HOH . C 3 HOH A 89 389 71 HOH HOH . C 3 HOH A 90 390 73 HOH HOH . C 3 HOH A 91 391 87 HOH HOH . C 3 HOH A 92 392 123 HOH HOH . C 3 HOH A 93 393 82 HOH HOH . C 3 HOH A 94 394 58 HOH HOH . C 3 HOH A 95 395 57 HOH HOH . C 3 HOH A 96 396 108 HOH HOH . C 3 HOH A 97 397 119 HOH HOH . C 3 HOH A 98 398 98 HOH HOH . C 3 HOH A 99 399 77 HOH HOH . C 3 HOH A 100 400 18 HOH HOH . C 3 HOH A 101 401 47 HOH HOH . C 3 HOH A 102 402 128 HOH HOH . C 3 HOH A 103 403 83 HOH HOH . C 3 HOH A 104 404 46 HOH HOH . C 3 HOH A 105 405 92 HOH HOH . C 3 HOH A 106 406 103 HOH HOH . C 3 HOH A 107 407 63 HOH HOH . C 3 HOH A 108 408 114 HOH HOH . C 3 HOH A 109 409 48 HOH HOH . C 3 HOH A 110 410 107 HOH HOH . C 3 HOH A 111 411 53 HOH HOH . C 3 HOH A 112 412 89 HOH HOH . C 3 HOH A 113 413 60 HOH HOH . C 3 HOH A 114 414 49 HOH HOH . C 3 HOH A 115 415 94 HOH HOH . C 3 HOH A 116 416 126 HOH HOH . C 3 HOH A 117 417 45 HOH HOH . C 3 HOH A 118 418 91 HOH HOH . C 3 HOH A 119 419 124 HOH HOH . C 3 HOH A 120 420 122 HOH HOH . C 3 HOH A 121 421 43 HOH HOH . C 3 HOH A 122 422 90 HOH HOH . C 3 HOH A 123 423 105 HOH HOH . C 3 HOH A 124 424 113 HOH HOH . C 3 HOH A 125 425 78 HOH HOH . C 3 HOH A 126 426 106 HOH HOH . C 3 HOH A 127 427 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O 4Y8 . . . B 2 37.226 -14.167 23.34 0.74 36.63 ? O 4Y8 201 A 1 HETATM 2 C C 4Y8 . . . B 2 38.124 -13.796 24.103 0.74 33.46 ? C 4Y8 201 A 1 HETATM 3 C CM2 4Y8 . . . B 2 38.703 -14.694 25.133 0.74 38.01 ? CM2 4Y8 201 A 1 HETATM 4 C CM1 4Y8 . . . B 2 38.615 -12.393 23.957 0.74 19.77 ? CM1 4Y8 201 A 1 HETATM 5 O O1 4Y8 . . . B 2 37.639 -11.775 23.219 0.74 26.63 ? O1 4Y8 201 A 1 HETATM 6 H H1 4Y8 . . . B 2 38.359 -15.725 25.022 0.74 45.65 ? H1 4Y8 201 A 1 HETATM 7 H H2 4Y8 . . . B 2 38.438 -14.385 26.146 0.74 45.65 ? H2 4Y8 201 A 1 HETATM 8 H H3 4Y8 . . . B 2 39.794 -14.722 25.091 0.74 45.65 ? H3 4Y8 201 A 1 HETATM 9 H H5 4Y8 . . . B 2 38.803 -11.902 24.947 0.74 23.76 ? H5 4Y8 201 A 1 HETATM 10 H H6 4Y8 . . . B 2 37.51 -12.338 22.465 0.74 32 ? H6 4Y8 201 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #