data_9CJ1 # _model_server_result.job_id eWnQq5EbFvZaGhsBGYqKyw _model_server_result.datetime_utc '2024-11-15 14:33:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9cj1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 9CJ1 # _exptl.entry_id 9CJ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.8 _cell.angle_gamma 90 _cell.entry_id 9CJ1 _cell.length_a 38.137 _cell.length_b 67.195 _cell.length_c 63.016 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9CJ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 119 A CYS 119 1_555 A SG CYS 162 A CYS 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A C PTR 182 A PTR 182 1_555 A N VAL 183 A VAL 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 9CJ1 _atom_sites.fract_transf_matrix[1][1] 0.026221 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003592 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014882 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016017 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 401 164 EDO EDO . C 3 NIL A 1 402 401 NIL NIL . D 2 EDO A 1 403 403 EDO EDO . E 2 EDO A 1 404 404 EDO EDO . F 2 EDO A 1 405 405 EDO EDO . G 2 EDO A 1 406 406 EDO EDO . H 2 EDO A 1 407 407 EDO EDO . I 4 HOH A 1 501 140 HOH HOH . I 4 HOH A 2 502 108 HOH HOH . I 4 HOH A 3 503 127 HOH HOH . I 4 HOH A 4 504 135 HOH HOH . I 4 HOH A 5 505 17 HOH HOH . I 4 HOH A 6 506 35 HOH HOH . I 4 HOH A 7 507 82 HOH HOH . I 4 HOH A 8 508 91 HOH HOH . I 4 HOH A 9 509 118 HOH HOH . I 4 HOH A 10 510 48 HOH HOH . I 4 HOH A 11 511 49 HOH HOH . I 4 HOH A 12 512 43 HOH HOH . I 4 HOH A 13 513 31 HOH HOH . I 4 HOH A 14 514 37 HOH HOH . I 4 HOH A 15 515 60 HOH HOH . I 4 HOH A 16 516 32 HOH HOH . I 4 HOH A 17 517 77 HOH HOH . I 4 HOH A 18 518 12 HOH HOH . I 4 HOH A 19 519 66 HOH HOH . I 4 HOH A 20 520 14 HOH HOH . I 4 HOH A 21 521 45 HOH HOH . I 4 HOH A 22 522 56 HOH HOH . I 4 HOH A 23 523 19 HOH HOH . I 4 HOH A 24 524 72 HOH HOH . I 4 HOH A 25 525 139 HOH HOH . I 4 HOH A 26 526 114 HOH HOH . I 4 HOH A 27 527 100 HOH HOH . I 4 HOH A 28 528 6 HOH HOH . I 4 HOH A 29 529 116 HOH HOH . I 4 HOH A 30 530 79 HOH HOH . I 4 HOH A 31 531 25 HOH HOH . I 4 HOH A 32 532 150 HOH HOH . I 4 HOH A 33 533 52 HOH HOH . I 4 HOH A 34 534 28 HOH HOH . I 4 HOH A 35 535 20 HOH HOH . I 4 HOH A 36 536 38 HOH HOH . I 4 HOH A 37 537 22 HOH HOH . I 4 HOH A 38 538 13 HOH HOH . I 4 HOH A 39 539 106 HOH HOH . I 4 HOH A 40 540 18 HOH HOH . I 4 HOH A 41 541 75 HOH HOH . I 4 HOH A 42 542 41 HOH HOH . I 4 HOH A 43 543 24 HOH HOH . I 4 HOH A 44 544 23 HOH HOH . I 4 HOH A 45 545 86 HOH HOH . I 4 HOH A 46 546 33 HOH HOH . I 4 HOH A 47 547 129 HOH HOH . I 4 HOH A 48 548 7 HOH HOH . I 4 HOH A 49 549 137 HOH HOH . I 4 HOH A 50 550 27 HOH HOH . I 4 HOH A 51 551 26 HOH HOH . I 4 HOH A 52 552 3 HOH HOH . I 4 HOH A 53 553 132 HOH HOH . I 4 HOH A 54 554 126 HOH HOH . I 4 HOH A 55 555 67 HOH HOH . I 4 HOH A 56 556 151 HOH HOH . I 4 HOH A 57 557 73 HOH HOH . I 4 HOH A 58 558 8 HOH HOH . I 4 HOH A 59 559 5 HOH HOH . I 4 HOH A 60 560 63 HOH HOH . I 4 HOH A 61 561 134 HOH HOH . I 4 HOH A 62 562 11 HOH HOH . I 4 HOH A 63 563 15 HOH HOH . I 4 HOH A 64 564 2 HOH HOH . I 4 HOH A 65 565 83 HOH HOH . I 4 HOH A 66 566 34 HOH HOH . I 4 HOH A 67 567 123 HOH HOH . I 4 HOH A 68 568 65 HOH HOH . I 4 HOH A 69 569 96 HOH HOH . I 4 HOH A 70 570 1 HOH HOH . I 4 HOH A 71 571 54 HOH HOH . I 4 HOH A 72 572 9 HOH HOH . I 4 HOH A 73 573 50 HOH HOH . I 4 HOH A 74 574 109 HOH HOH . I 4 HOH A 75 575 47 HOH HOH . I 4 HOH A 76 576 57 HOH HOH . I 4 HOH A 77 577 62 HOH HOH . I 4 HOH A 78 578 21 HOH HOH . I 4 HOH A 79 579 70 HOH HOH . I 4 HOH A 80 580 44 HOH HOH . I 4 HOH A 81 581 144 HOH HOH . I 4 HOH A 82 582 16 HOH HOH . I 4 HOH A 83 583 36 HOH HOH . I 4 HOH A 84 584 4 HOH HOH . I 4 HOH A 85 585 112 HOH HOH . I 4 HOH A 86 586 59 HOH HOH . I 4 HOH A 87 587 58 HOH HOH . I 4 HOH A 88 588 145 HOH HOH . I 4 HOH A 89 589 85 HOH HOH . I 4 HOH A 90 590 30 HOH HOH . I 4 HOH A 91 591 89 HOH HOH . I 4 HOH A 92 592 133 HOH HOH . I 4 HOH A 93 593 146 HOH HOH . I 4 HOH A 94 594 152 HOH HOH . I 4 HOH A 95 595 42 HOH HOH . I 4 HOH A 96 596 92 HOH HOH . I 4 HOH A 97 597 128 HOH HOH . I 4 HOH A 98 598 46 HOH HOH . I 4 HOH A 99 599 110 HOH HOH . I 4 HOH A 100 600 99 HOH HOH . I 4 HOH A 101 601 10 HOH HOH . I 4 HOH A 102 602 154 HOH HOH . I 4 HOH A 103 603 51 HOH HOH . I 4 HOH A 104 604 69 HOH HOH . I 4 HOH A 105 605 143 HOH HOH . I 4 HOH A 106 606 64 HOH HOH . I 4 HOH A 107 607 29 HOH HOH . I 4 HOH A 108 608 105 HOH HOH . I 4 HOH A 109 609 39 HOH HOH . I 4 HOH A 110 610 88 HOH HOH . I 4 HOH A 111 611 76 HOH HOH . I 4 HOH A 112 612 87 HOH HOH . I 4 HOH A 113 613 120 HOH HOH . I 4 HOH A 114 614 78 HOH HOH . I 4 HOH A 115 615 97 HOH HOH . I 4 HOH A 116 616 71 HOH HOH . I 4 HOH A 117 617 124 HOH HOH . I 4 HOH A 118 618 136 HOH HOH . I 4 HOH A 119 619 90 HOH HOH . I 4 HOH A 120 620 95 HOH HOH . I 4 HOH A 121 621 104 HOH HOH . I 4 HOH A 122 622 81 HOH HOH . I 4 HOH A 123 623 84 HOH HOH . I 4 HOH A 124 624 131 HOH HOH . I 4 HOH A 125 625 74 HOH HOH . I 4 HOH A 126 626 101 HOH HOH . I 4 HOH A 127 627 125 HOH HOH . I 4 HOH A 128 628 94 HOH HOH . I 4 HOH A 129 629 93 HOH HOH . I 4 HOH A 130 630 148 HOH HOH . I 4 HOH A 131 631 141 HOH HOH . I 4 HOH A 132 632 147 HOH HOH . I 4 HOH A 133 633 117 HOH HOH . I 4 HOH A 134 634 55 HOH HOH . I 4 HOH A 135 635 107 HOH HOH . I 4 HOH A 136 636 113 HOH HOH . I 4 HOH A 137 637 153 HOH HOH . I 4 HOH A 138 638 53 HOH HOH . I 4 HOH A 139 639 40 HOH HOH . I 4 HOH A 140 640 103 HOH HOH . I 4 HOH A 141 641 115 HOH HOH . I 4 HOH A 142 642 102 HOH HOH . I 4 HOH A 143 643 130 HOH HOH . I 4 HOH A 144 644 142 HOH HOH . I 4 HOH A 145 645 121 HOH HOH . I 4 HOH A 146 646 138 HOH HOH . I 4 HOH A 147 647 149 HOH HOH . I 4 HOH A 148 648 68 HOH HOH . I 4 HOH A 149 649 61 HOH HOH . I 4 HOH A 150 650 98 HOH HOH . I 4 HOH A 151 651 122 HOH HOH . I 4 HOH A 152 652 80 HOH HOH . I 4 HOH A 153 653 119 HOH HOH . I 4 HOH A 154 654 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 2 7.163 -17.075 -14.238 1 62.97 ? C1 EDO 403 A 1 HETATM 2 O O1 EDO . . . D 2 8.414 -17.228 -13.558 1 56.87 ? O1 EDO 403 A 1 HETATM 3 C C2 EDO . . . D 2 7.025 -18.175 -15.285 1 57.91 ? C2 EDO 403 A 1 HETATM 4 O O2 EDO . . . D 2 6.86 -19.437 -14.631 1 78.81 ? O2 EDO 403 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #