data_9CJV
#
_model_server_result.job_id            XdWwu36VXy6zrOxqLedDqQ 
_model_server_result.datetime_utc      '2025-07-14 06:34:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9cjv 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":403}' 
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_entry.id    9CJV 
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_exptl.entry_id    9CJV 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101.59 
_cell.angle_gamma         90 
_cell.entry_id            9CJV 
_cell.length_a            109.156 
_cell.length_b            52.593 
_cell.length_c            46.229 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 9CJV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
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loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -9.287727 0 45.286406 
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loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
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_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             145 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              145 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            C31 
_struct_conn.ptnr2_label_comp_id            FHR 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             FHR 
_struct_conn.ptnr2_auth_seq_id              401 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.773 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     9CJV 
_atom_sites.fract_transf_matrix[1][1]    0.009161 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001879 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019014 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022082 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FHR A 1 401 401 FHR FHR . 
C 3 DMS A 1 402 402 DMS DMS . 
D 3 DMS A 1 403 403 DMS DMS . 
E 4 HOH A 1 501 18 HOH HOH . 
E 4 HOH A 2 502 16 HOH HOH . 
E 4 HOH A 3 503 1 HOH HOH . 
E 4 HOH A 4 504 5 HOH HOH . 
E 4 HOH A 5 505 28 HOH HOH . 
E 4 HOH A 6 506 12 HOH HOH . 
E 4 HOH A 7 507 3 HOH HOH . 
E 4 HOH A 8 508 32 HOH HOH . 
E 4 HOH A 9 509 48 HOH HOH . 
E 4 HOH A 10 510 43 HOH HOH . 
E 4 HOH A 11 511 2 HOH HOH . 
E 4 HOH A 12 512 36 HOH HOH . 
E 4 HOH A 13 513 29 HOH HOH . 
E 4 HOH A 14 514 50 HOH HOH . 
E 4 HOH A 15 515 56 HOH HOH . 
E 4 HOH A 16 516 21 HOH HOH . 
E 4 HOH A 17 517 6 HOH HOH . 
E 4 HOH A 18 518 38 HOH HOH . 
E 4 HOH A 19 519 10 HOH HOH . 
E 4 HOH A 20 520 53 HOH HOH . 
E 4 HOH A 21 521 15 HOH HOH . 
E 4 HOH A 22 522 4 HOH HOH . 
E 4 HOH A 23 523 8 HOH HOH . 
E 4 HOH A 24 524 17 HOH HOH . 
E 4 HOH A 25 525 19 HOH HOH . 
E 4 HOH A 26 526 9 HOH HOH . 
E 4 HOH A 27 527 22 HOH HOH . 
E 4 HOH A 28 528 13 HOH HOH . 
E 4 HOH A 29 529 26 HOH HOH . 
E 4 HOH A 30 530 42 HOH HOH . 
E 4 HOH A 31 531 41 HOH HOH . 
E 4 HOH A 32 532 24 HOH HOH . 
E 4 HOH A 33 533 44 HOH HOH . 
E 4 HOH A 34 534 54 HOH HOH . 
E 4 HOH A 35 535 46 HOH HOH . 
E 4 HOH A 36 536 40 HOH HOH . 
E 4 HOH A 37 537 59 HOH HOH . 
E 4 HOH A 38 538 33 HOH HOH . 
E 4 HOH A 39 539 11 HOH HOH . 
E 4 HOH A 40 540 35 HOH HOH . 
E 4 HOH A 41 541 34 HOH HOH . 
E 4 HOH A 42 542 57 HOH HOH . 
E 4 HOH A 43 543 25 HOH HOH . 
E 4 HOH A 44 544 7 HOH HOH . 
E 4 HOH A 45 545 58 HOH HOH . 
E 4 HOH A 46 546 30 HOH HOH . 
E 4 HOH A 47 547 39 HOH HOH . 
E 4 HOH A 48 548 27 HOH HOH . 
E 4 HOH A 49 549 45 HOH HOH . 
E 4 HOH A 50 550 61 HOH HOH . 
E 4 HOH A 51 551 20 HOH HOH . 
E 4 HOH A 52 552 37 HOH HOH . 
E 4 HOH A 53 553 14 HOH HOH . 
E 4 HOH A 54 554 31 HOH HOH . 
E 4 HOH A 55 555 60 HOH HOH . 
E 4 HOH A 56 556 49 HOH HOH . 
E 4 HOH A 57 557 51 HOH HOH . 
E 4 HOH A 58 558 52 HOH HOH . 
E 4 HOH A 59 559 23 HOH HOH . 
E 4 HOH A 60 560 47 HOH HOH . 
E 4 HOH A 61 561 55 HOH HOH . 
E 4 HOH A 62 562 62 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 3 -1.535 11.885 31.507 1 70.23 ? S DMS 403 A 1 
HETATM 2 O O DMS . . . D 3 -0.723 12.1 32.742 1 59.44 ? O DMS 403 A 1 
HETATM 3 C C1 DMS . . . D 3 -1.33 10.149 31.035 1 41.37 ? C1 DMS 403 A 1 
HETATM 4 C C2 DMS . . . D 3 -0.648 12.611 30.105 1 53.25 ? C2 DMS 403 A 1 
HETATM 5 H H11 DMS . . . D 3 -1.745 9.527 31.784 1 49.73 ? H11 DMS 403 A 1 
HETATM 6 H H12 DMS . . . D 3 -0.299 9.931 30.928 1 49.73 ? H12 DMS 403 A 1 
HETATM 7 H H13 DMS . . . D 3 -1.825 9.972 30.116 1 49.73 ? H13 DMS 403 A 1 
HETATM 8 H H21 DMS . . . D 3 0.302 12.152 30.012 1 63.99 ? H21 DMS 403 A 1 
HETATM 9 H H22 DMS . . . D 3 -0.523 13.65 30.265 1 63.99 ? H22 DMS 403 A 1 
HETATM 10 H H23 DMS . . . D 3 -1.203 12.455 29.217 1 63.99 ? H23 DMS 403 A 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           442 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           10 
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