data_9CK0
#
_model_server_result.job_id            zD0DrYpuRUzy5mCzl1HKQg 
_model_server_result.datetime_utc      '2024-10-11 02:17:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9ck0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    9CK0 
#
_exptl.entry_id    9CK0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              495.569 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2~{S})-3-[4-[2-[methyl(pyridin-2-yl)amino]ethoxy]phenyl]-2-[[2-(phenylcarbonyl)phenyl]amino]propanoic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9CK0 
_cell.length_a            55.53 
_cell.length_b            89.5 
_cell.length_c            121.545 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9CK0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    'C 2c 2' 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C30 H29 N3 O4' 
_chem_comp.formula_weight    495.569 
_chem_comp.id                EDK 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2~{S})-3-[4-[2-[methyl(pyridin-2-yl)amino]ethoxy]phenyl]-2-[[2-(phenylcarbonyl)phenyl]amino]propanoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C1 EDK sing 83 n n 
C2 O EDK sing 84 n n 
C24 C23 EDK doub 85 n y 
C24 C3 EDK sing 86 n y 
C1 N EDK sing 87 n n 
C23 C6 EDK sing 88 n y 
O C3 EDK sing 89 n n 
C3 C4 EDK doub 90 n y 
C6 C7 EDK sing 91 n n 
C6 C5 EDK doub 92 n y 
C4 C5 EDK sing 93 n y 
C7 C8 EDK sing 94 n n 
N C EDK sing 95 n n 
N C25 EDK sing 96 n n 
N2 C25 EDK doub 97 n y 
N2 C26 EDK sing 98 n y 
O2 C22 EDK doub 99 n n 
C25 C29 EDK sing 100 n y 
C26 C27 EDK doub 101 n y 
C8 C22 EDK sing 102 n n 
C8 N1 EDK sing 103 n n 
C22 O3 EDK sing 104 n n 
N1 C9 EDK sing 105 n n 
C29 C28 EDK doub 106 n y 
C27 C28 EDK sing 107 n y 
O1 C15 EDK doub 108 n n 
C9 C14 EDK doub 109 n y 
C9 C10 EDK sing 110 n y 
C14 C13 EDK sing 111 n y 
C15 C10 EDK sing 112 n n 
C15 C16 EDK sing 113 n n 
C10 C11 EDK doub 114 n y 
C21 C16 EDK doub 115 n y 
C21 C20 EDK sing 116 n y 
C13 C12 EDK doub 117 n y 
C16 C17 EDK sing 118 n y 
C20 C19 EDK doub 119 n y 
C11 C12 EDK sing 120 n y 
C17 C18 EDK doub 121 n y 
C19 C18 EDK sing 122 n y 
O3 H1 EDK sing 123 n n 
C4 H2 EDK sing 124 n n 
C5 H3 EDK sing 125 n n 
N1 H4 EDK sing 126 n n 
C7 H5 EDK sing 127 n n 
C7 H6 EDK sing 128 n n 
C8 H7 EDK sing 129 n n 
C11 H8 EDK sing 130 n n 
C12 H9 EDK sing 131 n n 
C13 H10 EDK sing 132 n n 
C14 H11 EDK sing 133 n n 
C21 H12 EDK sing 134 n n 
C20 H13 EDK sing 135 n n 
C19 H14 EDK sing 136 n n 
C18 H15 EDK sing 137 n n 
C17 H16 EDK sing 138 n n 
C23 H17 EDK sing 139 n n 
C24 H18 EDK sing 140 n n 
C2 H19 EDK sing 141 n n 
C2 H20 EDK sing 142 n n 
C1 H21 EDK sing 143 n n 
C1 H22 EDK sing 144 n n 
C H23 EDK sing 145 n n 
C H24 EDK sing 146 n n 
C H25 EDK sing 147 n n 
C29 H26 EDK sing 148 n n 
C28 H27 EDK sing 149 n n 
C27 H28 EDK sing 150 n n 
C26 H29 EDK sing 151 n n 
#
_atom_sites.entry_id                     9CK0 
_atom_sites.fract_transf_matrix[1][1]    0.018008 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011173 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008227 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          C 
_pdbx_nonpoly_scheme.entity_id        3 
_pdbx_nonpoly_scheme.mon_id           EDK 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      501 
_pdbx_nonpoly_scheme.auth_seq_num     501 
_pdbx_nonpoly_scheme.pdb_mon_id       EDK 
_pdbx_nonpoly_scheme.auth_mon_id      129 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O3 EDK . . . C 3 -18.542 -19.518 13.961 1 63.41 ? O3 EDK 501 A 1 
HETATM 2 C C4 EDK . . . C 3 -23.336 -18.097 10.554 1 49.73 ? C4 EDK 501 A 1 
HETATM 3 C C5 EDK . . . C 3 -22.359 -18.325 11.514 1 51.79 ? C5 EDK 501 A 1 
HETATM 4 C C6 EDK . . . C 3 -22.71 -18.855 12.747 1 59.1 ? C6 EDK 501 A 1 
HETATM 5 N N1 EDK . . . C 3 -21.504 -21.554 13.809 1 53.87 ? N1 EDK 501 A 1 
HETATM 6 C C7 EDK . . . C 3 -21.636 -19.11 13.813 1 56.47 ? C7 EDK 501 A 1 
HETATM 7 C C8 EDK . . . C 3 -20.771 -20.331 13.502 1 54.92 ? C8 EDK 501 A 1 
HETATM 8 N N2 EDK . . . C 3 -25.31 -19.893 5.675 1 53.2 ? N2 EDK 501 A 1 
HETATM 9 C C9 EDK . . . C 3 -21.102 -22.812 13.186 1 49.9 ? C9 EDK 501 A 1 
HETATM 10 C C10 EDK . . . C 3 -22.056 -23.709 12.716 1 59.91 ? C10 EDK 501 A 1 
HETATM 11 C C11 EDK . . . C 3 -21.638 -24.893 12.124 1 73.09 ? C11 EDK 501 A 1 
HETATM 12 C C12 EDK . . . C 3 -20.29 -25.186 12.001 1 68.56 ? C12 EDK 501 A 1 
HETATM 13 C C13 EDK . . . C 3 -19.343 -24.293 12.469 1 63.89 ? C13 EDK 501 A 1 
HETATM 14 C C14 EDK . . . C 3 -19.755 -23.11 13.059 1 48.23 ? C14 EDK 501 A 1 
HETATM 15 C C15 EDK . . . C 3 -23.551 -23.385 12.856 1 53.09 ? C15 EDK 501 A 1 
HETATM 16 C C22 EDK . . . C 3 -19.494 -20.25 14.336 1 68.45 ? C22 EDK 501 A 1 
HETATM 17 O O2 EDK . . . C 3 -19.387 -20.926 15.394 1 54.57 ? O2 EDK 501 A 1 
HETATM 18 C C16 EDK . . . C 3 -24.651 -24.389 12.466 1 60.63 ? C16 EDK 501 A 1 
HETATM 19 C C21 EDK . . . C 3 -24.608 -25.717 12.872 1 68.75 ? C21 EDK 501 A 1 
HETATM 20 C C20 EDK . . . C 3 -25.615 -26.598 12.511 1 67.78 ? C20 EDK 501 A 1 
HETATM 21 C C19 EDK . . . C 3 -26.677 -26.155 11.738 1 65.23 ? C19 EDK 501 A 1 
HETATM 22 C C18 EDK . . . C 3 -26.728 -24.833 11.33 1 61.93 ? C18 EDK 501 A 1 
HETATM 23 C C17 EDK . . . C 3 -25.719 -23.954 11.697 1 65.4 ? C17 EDK 501 A 1 
HETATM 24 O O1 EDK . . . C 3 -23.867 -22.325 13.281 1 62.42 ? O1 EDK 501 A 1 
HETATM 25 C C23 EDK . . . C 3 -24.036 -19.151 13.029 1 48.85 ? C23 EDK 501 A 1 
HETATM 26 C C24 EDK . . . C 3 -25.009 -18.921 12.074 1 55.39 ? C24 EDK 501 A 1 
HETATM 27 C C3 EDK . . . C 3 -24.662 -18.39 10.84 1 65.53 ? C3 EDK 501 A 1 
HETATM 28 O O EDK . . . C 3 -25.668 -18.17 9.887 1 50.86 ? O EDK 501 A 1 
HETATM 29 C C2 EDK . . . C 3 -25.228 -18.004 8.566 1 57.57 ? C2 EDK 501 A 1 
HETATM 30 C C1 EDK . . . C 3 -26.438 -18.231 7.659 1 52.64 ? C1 EDK 501 A 1 
HETATM 31 N N EDK . . . C 3 -26.744 -19.65 7.58 1 51.98 ? N EDK 501 A 1 
HETATM 32 C C EDK . . . C 3 -27.676 -20.253 8.518 1 52.72 ? C EDK 501 A 1 
HETATM 33 C C25 EDK . . . C 3 -26.121 -20.463 6.551 1 55.1 ? C25 EDK 501 A 1 
HETATM 34 C C29 EDK . . . C 3 -26.397 -21.821 6.489 1 55.84 ? C29 EDK 501 A 1 
HETATM 35 C C28 EDK . . . C 3 -25.813 -22.603 5.506 1 56.04 ? C28 EDK 501 A 1 
HETATM 36 C C27 EDK . . . C 3 -24.964 -21.967 4.612 1 48.75 ? C27 EDK 501 A 1 
HETATM 37 C C26 EDK . . . C 3 -24.733 -20.606 4.724 1 47.72 ? C26 EDK 501 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           335 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           37 
#