data_9CLY
#
_model_server_result.job_id            nVVzy8C9a9QrtMijxHLECA 
_model_server_result.datetime_utc      '2024-10-10 10:25:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9cly 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":302}' 
#
_entry.id    9CLY 
#
_exptl.entry_id    9CLY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              69.085 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            IMIDAZOLE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            9CLY 
_cell.length_a            111.518 
_cell.length_b            111.518 
_cell.length_c            102.561 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9CLY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    'P 31 2"' 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G 1 1 
A,B,C,D,E,F,G 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'point symmetry operation' ? ? -0.5 -0.866 0 -0.866 0.5 0 0 0 -1 0 0 34.187 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H5 N2 1' 
_chem_comp.formula_weight    69.085 
_chem_comp.id                IMD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              IMIDAZOLE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 IMD sing 173 n y 
N1 C5 IMD sing 174 n y 
N1 HN1 IMD sing 175 n n 
C2 N3 IMD doub 176 n y 
C2 H2 IMD sing 177 n n 
N3 C4 IMD sing 178 n y 
N3 HN3 IMD sing 179 n n 
C4 C5 IMD doub 180 n y 
C4 H4 IMD sing 181 n n 
C5 H5 IMD sing 182 n n 
#
_atom_sites.entry_id                     9CLY 
_atom_sites.fract_transf_matrix[1][1]    0.008967 
_atom_sites.fract_transf_matrix[1][2]    0.005177 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010354 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00975 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NDP A 1 301 301 NDP NDP . 
D 2 NDP B 1 301 301 NDP NDP . 
E 3 IMD B 1 302 302 IMD IMD . 
F 4 HOH A 1 401 22 HOH HOH . 
F 4 HOH A 2 402 126 HOH HOH . 
F 4 HOH A 3 403 10 HOH HOH . 
F 4 HOH A 4 404 18 HOH HOH . 
F 4 HOH A 5 405 83 HOH HOH . 
F 4 HOH A 6 406 148 HOH HOH . 
F 4 HOH A 7 407 43 HOH HOH . 
F 4 HOH A 8 408 66 HOH HOH . 
F 4 HOH A 9 409 76 HOH HOH . 
F 4 HOH A 10 410 20 HOH HOH . 
F 4 HOH A 11 411 53 HOH HOH . 
F 4 HOH A 12 412 124 HOH HOH . 
F 4 HOH A 13 413 40 HOH HOH . 
F 4 HOH A 14 414 24 HOH HOH . 
F 4 HOH A 15 415 133 HOH HOH . 
F 4 HOH A 16 416 54 HOH HOH . 
F 4 HOH A 17 417 35 HOH HOH . 
F 4 HOH A 18 418 111 HOH HOH . 
F 4 HOH A 19 419 67 HOH HOH . 
F 4 HOH A 20 420 27 HOH HOH . 
F 4 HOH A 21 421 9 HOH HOH . 
F 4 HOH A 22 422 110 HOH HOH . 
F 4 HOH A 23 423 63 HOH HOH . 
F 4 HOH A 24 424 73 HOH HOH . 
F 4 HOH A 25 425 85 HOH HOH . 
F 4 HOH A 26 426 1 HOH HOH . 
F 4 HOH A 27 427 102 HOH HOH . 
F 4 HOH A 28 428 8 HOH HOH . 
F 4 HOH A 29 429 77 HOH HOH . 
F 4 HOH A 30 430 17 HOH HOH . 
F 4 HOH A 31 431 41 HOH HOH . 
F 4 HOH A 32 432 39 HOH HOH . 
F 4 HOH A 33 433 78 HOH HOH . 
F 4 HOH A 34 434 99 HOH HOH . 
F 4 HOH A 35 435 128 HOH HOH . 
F 4 HOH A 36 436 71 HOH HOH . 
F 4 HOH A 37 437 25 HOH HOH . 
F 4 HOH A 38 438 137 HOH HOH . 
F 4 HOH A 39 439 129 HOH HOH . 
F 4 HOH A 40 440 11 HOH HOH . 
F 4 HOH A 41 441 103 HOH HOH . 
F 4 HOH A 42 442 138 HOH HOH . 
F 4 HOH A 43 443 88 HOH HOH . 
F 4 HOH A 44 444 70 HOH HOH . 
F 4 HOH A 45 445 127 HOH HOH . 
F 4 HOH A 46 446 152 HOH HOH . 
F 4 HOH A 47 447 125 HOH HOH . 
F 4 HOH A 48 448 96 HOH HOH . 
F 4 HOH A 49 449 105 HOH HOH . 
F 4 HOH A 50 450 95 HOH HOH . 
F 4 HOH A 51 451 68 HOH HOH . 
F 4 HOH A 52 452 97 HOH HOH . 
F 4 HOH A 53 453 80 HOH HOH . 
F 4 HOH A 54 454 79 HOH HOH . 
F 4 HOH A 55 455 15 HOH HOH . 
F 4 HOH A 56 456 81 HOH HOH . 
F 4 HOH A 57 457 21 HOH HOH . 
F 4 HOH A 58 458 31 HOH HOH . 
F 4 HOH A 59 459 19 HOH HOH . 
F 4 HOH A 60 460 32 HOH HOH . 
F 4 HOH A 61 461 140 HOH HOH . 
F 4 HOH A 62 462 115 HOH HOH . 
F 4 HOH A 63 463 46 HOH HOH . 
F 4 HOH A 64 464 2 HOH HOH . 
F 4 HOH A 65 465 28 HOH HOH . 
F 4 HOH A 66 466 38 HOH HOH . 
F 4 HOH A 67 467 100 HOH HOH . 
F 4 HOH A 68 468 30 HOH HOH . 
F 4 HOH A 69 469 122 HOH HOH . 
F 4 HOH A 70 470 142 HOH HOH . 
F 4 HOH A 71 471 82 HOH HOH . 
F 4 HOH A 72 472 116 HOH HOH . 
F 4 HOH A 73 473 141 HOH HOH . 
F 4 HOH A 74 474 158 HOH HOH . 
F 4 HOH A 75 475 156 HOH HOH . 
F 4 HOH A 76 476 89 HOH HOH . 
F 4 HOH A 77 477 123 HOH HOH . 
F 4 HOH A 78 478 120 HOH HOH . 
F 4 HOH A 79 479 121 HOH HOH . 
F 4 HOH A 80 480 37 HOH HOH . 
F 4 HOH A 81 481 90 HOH HOH . 
G 4 HOH B 1 401 23 HOH HOH . 
G 4 HOH B 2 402 84 HOH HOH . 
G 4 HOH B 3 403 62 HOH HOH . 
G 4 HOH B 4 404 149 HOH HOH . 
G 4 HOH B 5 405 45 HOH HOH . 
G 4 HOH B 6 406 154 HOH HOH . 
G 4 HOH B 7 407 7 HOH HOH . 
G 4 HOH B 8 408 107 HOH HOH . 
G 4 HOH B 9 409 104 HOH HOH . 
G 4 HOH B 10 410 75 HOH HOH . 
G 4 HOH B 11 411 49 HOH HOH . 
G 4 HOH B 12 412 74 HOH HOH . 
G 4 HOH B 13 413 3 HOH HOH . 
G 4 HOH B 14 414 92 HOH HOH . 
G 4 HOH B 15 415 36 HOH HOH . 
G 4 HOH B 16 416 4 HOH HOH . 
G 4 HOH B 17 417 6 HOH HOH . 
G 4 HOH B 18 418 26 HOH HOH . 
G 4 HOH B 19 419 160 HOH HOH . 
G 4 HOH B 20 420 13 HOH HOH . 
G 4 HOH B 21 421 134 HOH HOH . 
G 4 HOH B 22 422 47 HOH HOH . 
G 4 HOH B 23 423 101 HOH HOH . 
G 4 HOH B 24 424 64 HOH HOH . 
G 4 HOH B 25 425 69 HOH HOH . 
G 4 HOH B 26 426 144 HOH HOH . 
G 4 HOH B 27 427 34 HOH HOH . 
G 4 HOH B 28 428 52 HOH HOH . 
G 4 HOH B 29 429 114 HOH HOH . 
G 4 HOH B 30 430 159 HOH HOH . 
G 4 HOH B 31 431 42 HOH HOH . 
G 4 HOH B 32 432 58 HOH HOH . 
G 4 HOH B 33 433 48 HOH HOH . 
G 4 HOH B 34 434 94 HOH HOH . 
G 4 HOH B 35 435 135 HOH HOH . 
G 4 HOH B 36 436 44 HOH HOH . 
G 4 HOH B 37 437 108 HOH HOH . 
G 4 HOH B 38 438 143 HOH HOH . 
G 4 HOH B 39 439 12 HOH HOH . 
G 4 HOH B 40 440 109 HOH HOH . 
G 4 HOH B 41 441 61 HOH HOH . 
G 4 HOH B 42 442 72 HOH HOH . 
G 4 HOH B 43 443 60 HOH HOH . 
G 4 HOH B 44 444 146 HOH HOH . 
G 4 HOH B 45 445 51 HOH HOH . 
G 4 HOH B 46 446 150 HOH HOH . 
G 4 HOH B 47 447 98 HOH HOH . 
G 4 HOH B 48 448 93 HOH HOH . 
G 4 HOH B 49 449 55 HOH HOH . 
G 4 HOH B 50 450 145 HOH HOH . 
G 4 HOH B 51 451 57 HOH HOH . 
G 4 HOH B 52 452 65 HOH HOH . 
G 4 HOH B 53 453 16 HOH HOH . 
G 4 HOH B 54 454 5 HOH HOH . 
G 4 HOH B 55 455 33 HOH HOH . 
G 4 HOH B 56 456 91 HOH HOH . 
G 4 HOH B 57 457 87 HOH HOH . 
G 4 HOH B 58 458 136 HOH HOH . 
G 4 HOH B 59 459 59 HOH HOH . 
G 4 HOH B 60 460 86 HOH HOH . 
G 4 HOH B 61 461 130 HOH HOH . 
G 4 HOH B 62 462 29 HOH HOH . 
G 4 HOH B 63 463 14 HOH HOH . 
G 4 HOH B 64 464 113 HOH HOH . 
G 4 HOH B 65 465 151 HOH HOH . 
G 4 HOH B 66 466 131 HOH HOH . 
G 4 HOH B 67 467 112 HOH HOH . 
G 4 HOH B 68 468 118 HOH HOH . 
G 4 HOH B 69 469 119 HOH HOH . 
G 4 HOH B 70 470 50 HOH HOH . 
G 4 HOH B 71 471 157 HOH HOH . 
G 4 HOH B 72 472 147 HOH HOH . 
G 4 HOH B 73 473 153 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 IMD . . . E 3 36.721 -54.355 -6.599 1 64.22 ? N1 IMD 302 B 1 
HETATM 2 C C2 IMD . . . E 3 36.925 -54.29 -7.908 1 62.61 ? C2 IMD 302 B 1 
HETATM 3 N N3 IMD . . . E 3 36.355 -53.172 -8.34 1 64.88 ? N3 IMD 302 B 1 
HETATM 4 C C4 IMD . . . E 3 35.772 -52.507 -7.286 1 61.9 ? C4 IMD 302 B 1 
HETATM 5 C C5 IMD . . . E 3 36.004 -53.26 -6.177 1 58.36 ? C5 IMD 302 B 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           264 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           5 
#