data_9COR
#
_model_server_result.job_id            jNMBZTy3jGiV3rn9seVnrg 
_model_server_result.datetime_utc      '2025-02-05 07:42:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9cor 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":602}' 
#
_entry.id    9COR 
#
_exptl.entry_id    9COR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              572.642 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (2R)-3-phenyl-2-{[(2S)-3-phenyl-2-{[N-(trifluoroacetyl)glycyl]amino}propyl]sulfanyl}-N-[2-(pyridin-3-yl)ethyl]propanamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9COR 
_cell.length_a            76.02 
_cell.length_b            101.31 
_cell.length_c            124.75 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9COR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C 1 1 
A,B,C 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_545 x,-y-1,-z 1 0 0 0 -1 0 0 0 -1 0 -101.31 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? 
metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N30 A1A07 . A A1A07 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? 
#
_chem_comp.formula           'C29 H31 F3 N4 O3 S' 
_chem_comp.formula_weight    572.642 
_chem_comp.id                A1A07 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (2R)-3-phenyl-2-{[(2S)-3-phenyl-2-{[N-(trifluoroacetyl)glycyl]amino}propyl]sulfanyl}-N-[2-(pyridin-3-yl)ethyl]propanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O10 C09 A1A07 doub 1 n n 
C08 N07 A1A07 sing 2 n n 
C08 C09 A1A07 sing 3 n n 
N07 C05 A1A07 sing 4 n n 
C09 N11 A1A07 sing 5 n n 
F03 C02 A1A07 sing 6 n n 
F04 C02 A1A07 sing 7 n n 
C40 C39 A1A07 doub 8 n y 
C40 C35 A1A07 sing 9 n y 
C39 C38 A1A07 sing 10 n y 
C05 C02 A1A07 sing 11 n n 
C05 O06 A1A07 doub 12 n n 
C34 C35 A1A07 sing 13 n n 
C34 C12 A1A07 sing 14 n n 
C02 F01 A1A07 sing 15 n n 
C31 C32 A1A07 doub 16 n y 
C31 N30 A1A07 sing 17 n y 
C32 C33 A1A07 sing 18 n y 
C35 C36 A1A07 doub 19 n y 
N11 C12 A1A07 sing 20 n n 
C38 C37 A1A07 doub 21 n y 
C12 C13 A1A07 sing 22 n n 
N30 C29 A1A07 doub 23 n y 
C36 C37 A1A07 sing 24 n y 
C33 C28 A1A07 doub 25 n y 
C13 S14 A1A07 sing 26 n n 
C29 C28 A1A07 sing 27 n y 
C28 C27 A1A07 sing 28 n n 
S14 C15 A1A07 sing 29 n n 
C15 C16 A1A07 sing 30 n n 
C15 C23 A1A07 sing 31 n n 
C27 C26 A1A07 sing 32 n n 
C26 N25 A1A07 sing 33 n n 
C16 C17 A1A07 sing 34 n n 
C23 N25 A1A07 sing 35 n n 
C23 O24 A1A07 doub 36 n n 
C17 C18 A1A07 doub 37 n y 
C17 C22 A1A07 sing 38 n y 
C18 C19 A1A07 sing 39 n y 
C22 C21 A1A07 doub 40 n y 
C19 C20 A1A07 doub 41 n y 
C21 C20 A1A07 sing 42 n y 
C13 H1 A1A07 sing 43 n n 
C13 H2 A1A07 sing 44 n n 
C15 H3 A1A07 sing 45 n n 
C20 H4 A1A07 sing 46 n n 
C21 H5 A1A07 sing 47 n n 
C22 H6 A1A07 sing 48 n n 
C26 H7 A1A07 sing 49 n n 
C08 H8 A1A07 sing 50 n n 
C08 H9 A1A07 sing 51 n n 
C12 H10 A1A07 sing 52 n n 
C16 H11 A1A07 sing 53 n n 
C16 H12 A1A07 sing 54 n n 
C18 H13 A1A07 sing 55 n n 
C19 H14 A1A07 sing 56 n n 
C27 H15 A1A07 sing 57 n n 
C27 H16 A1A07 sing 58 n n 
C29 H17 A1A07 sing 59 n n 
C31 H18 A1A07 sing 60 n n 
C32 H19 A1A07 sing 61 n n 
C33 H20 A1A07 sing 62 n n 
C34 H21 A1A07 sing 63 n n 
C34 H22 A1A07 sing 64 n n 
C36 H23 A1A07 sing 65 n n 
C37 H24 A1A07 sing 66 n n 
C38 H25 A1A07 sing 67 n n 
C39 H26 A1A07 sing 68 n n 
C40 H27 A1A07 sing 69 n n 
N07 H28 A1A07 sing 70 n n 
N11 H29 A1A07 sing 71 n n 
C26 H30 A1A07 sing 72 n n 
N25 H31 A1A07 sing 73 n n 
#
_atom_sites.entry_id                     9COR 
_atom_sites.fract_transf_matrix[1][1]    0.013154 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009871 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008016 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 601 500 HEM HEM . 
C 3 A1A07 A 1 602 700 A1A07 LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 A1A07 . . . C 3 -15.377 -35.124 -8.205 1 136.42 ? C13 A1A07 602 A 1 
HETATM 2 C C15 A1A07 . . . C 3 -14.837 -32.418 -6.574 1 131.22 ? C15 A1A07 602 A 1 
HETATM 3 C C17 A1A07 . . . C 3 -13.712 -31.349 -4.415 1 126.55 ? C17 A1A07 602 A 1 
HETATM 4 C C20 A1A07 . . . C 3 -13.831 -30.739 -1.612 1 126.43 ? C20 A1A07 602 A 1 
HETATM 5 C C21 A1A07 . . . C 3 -14.156 -32.013 -2.085 1 128.49 ? C21 A1A07 602 A 1 
HETATM 6 C C22 A1A07 . . . C 3 -14.094 -32.314 -3.452 1 127.07 ? C22 A1A07 602 A 1 
HETATM 7 C C26 A1A07 . . . C 3 -16.65 -29.698 -6.528 1 98.77 ? C26 A1A07 602 A 1 
HETATM 8 C C28 A1A07 . . . C 3 -18.449 -28.267 -7.879 1 81.64 ? C28 A1A07 602 A 1 
HETATM 9 C C02 A1A07 . . . C 3 -10.863 -39.112 -10.379 1 171.11 ? C02 A1A07 602 A 1 
HETATM 10 C C05 A1A07 . . . C 3 -11.626 -37.695 -10.537 1 172.99 ? C05 A1A07 602 A 1 
HETATM 11 C C08 A1A07 . . . C 3 -11.921 -35.442 -11.726 1 161.91 ? C08 A1A07 602 A 1 
HETATM 12 C C09 A1A07 . . . C 3 -13.451 -35.296 -11.262 1 159.4 ? C09 A1A07 602 A 1 
HETATM 13 C C12 A1A07 . . . C 3 -15.251 -34.262 -9.537 1 128.05 ? C12 A1A07 602 A 1 
HETATM 14 C C16 A1A07 . . . C 3 -13.648 -31.672 -5.907 1 129.82 ? C16 A1A07 602 A 1 
HETATM 15 C C18 A1A07 . . . C 3 -13.396 -30.079 -3.914 1 121.91 ? C18 A1A07 602 A 1 
HETATM 16 C C19 A1A07 . . . C 3 -13.453 -29.779 -2.548 1 123.38 ? C19 A1A07 602 A 1 
HETATM 17 C C23 A1A07 . . . C 3 -16.242 -32.198 -5.866 1 119.45 ? C23 A1A07 602 A 1 
HETATM 18 C C27 A1A07 . . . C 3 -17.779 -28.573 -6.538 1 87.9 ? C27 A1A07 602 A 1 
HETATM 19 C C29 A1A07 . . . C 3 -19.853 -28.269 -8.03 1 83.25 ? C29 A1A07 602 A 1 
HETATM 20 C C31 A1A07 . . . C 3 -19.821 -27.729 -10.309 1 87.71 ? C31 A1A07 602 A 1 
HETATM 21 C C32 A1A07 . . . C 3 -18.421 -27.701 -10.289 1 91.02 ? C32 A1A07 602 A 1 
HETATM 22 C C33 A1A07 . . . C 3 -17.752 -27.969 -9.08 1 84.22 ? C33 A1A07 602 A 1 
HETATM 23 C C34 A1A07 . . . C 3 -16.512 -34.456 -10.512 1 123.71 ? C34 A1A07 602 A 1 
HETATM 24 C C35 A1A07 . . . C 3 -17.769 -33.658 -10.197 1 104.57 ? C35 A1A07 602 A 1 
HETATM 25 C C36 A1A07 . . . C 3 -18.653 -34.018 -9.156 1 94.41 ? C36 A1A07 602 A 1 
HETATM 26 C C37 A1A07 . . . C 3 -19.814 -33.271 -8.864 1 87.31 ? C37 A1A07 602 A 1 
HETATM 27 C C38 A1A07 . . . C 3 -20.138 -32.127 -9.604 1 88.79 ? C38 A1A07 602 A 1 
HETATM 28 C C39 A1A07 . . . C 3 -19.275 -31.752 -10.64 1 80.96 ? C39 A1A07 602 A 1 
HETATM 29 C C40 A1A07 . . . C 3 -18.119 -32.501 -10.925 1 93.44 ? C40 A1A07 602 A 1 
HETATM 30 F F01 A1A07 . . . C 3 -10.684 -39.408 -9.1 1 166.53 ? F01 A1A07 602 A 1 
HETATM 31 F F03 A1A07 . . . C 3 -9.626 -39.11 -10.95 1 170.52 ? F03 A1A07 602 A 1 
HETATM 32 F F04 A1A07 . . . C 3 -11.523 -40.13 -10.928 1 158.54 ? F04 A1A07 602 A 1 
HETATM 33 N N07 A1A07 . . . C 3 -11.256 -36.751 -11.548 1 169.2 ? N07 A1A07 602 A 1 
HETATM 34 N N11 A1A07 . . . C 3 -13.853 -34.484 -10.126 1 143.22 ? N11 A1A07 602 A 1 
HETATM 35 N N25 A1A07 . . . C 3 -17.014 -30.998 -5.859 1 106.06 ? N25 A1A07 602 A 1 
HETATM 36 N N30 A1A07 . . . C 3 -20.521 -28.013 -9.182 1 76.03 ? N30 A1A07 602 A 1 
HETATM 37 O O06 A1A07 . . . C 3 -12.498 -37.539 -9.708 1 173.19 ? O06 A1A07 602 A 1 
HETATM 38 O O10 A1A07 . . . C 3 -14.281 -35.906 -11.908 1 162.45 ? O10 A1A07 602 A 1 
HETATM 39 O O24 A1A07 . . . C 3 -16.681 -33.175 -5.271 1 110.35 ? O24 A1A07 602 A 1 
HETATM 40 S S14 A1A07 . . . C 3 -14.517 -34.291 -6.733 1 153.11 ? S14 A1A07 602 A 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           40 
#