data_9COU # _model_server_result.job_id xi1vm2LavszjpTzN1SASFA _model_server_result.datetime_utc '2025-01-09 21:11:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9cou # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 9COU # _exptl.entry_id 9COU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9COU _cell.length_a 76.76 _cell.length_b 100.76 _cell.length_c 126.49 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9COU _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C 1 1 A,B,C 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_545 x,-y-1,-z 1 0 0 0 -1 0 0 0 -1 0 -100.76 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N09 A1A4U . A A1A4U 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 207 n n CHA C4D HEM doub 208 n n CHA HHA HEM sing 209 n n CHB C4A HEM sing 210 n n CHB C1B HEM doub 211 n n CHB HHB HEM sing 212 n n CHC C4B HEM sing 213 n n CHC C1C HEM doub 214 n n CHC HHC HEM sing 215 n n CHD C4C HEM doub 216 n n CHD C1D HEM sing 217 n n CHD HHD HEM sing 218 n n C1A C2A HEM doub 219 n y C1A NA HEM sing 220 n y C2A C3A HEM sing 221 n y C2A CAA HEM sing 222 n n C3A C4A HEM doub 223 n y C3A CMA HEM sing 224 n n C4A NA HEM sing 225 n y CMA HMA HEM sing 226 n n CMA HMAA HEM sing 227 n n CMA HMAB HEM sing 228 n n CAA CBA HEM sing 229 n n CAA HAA HEM sing 230 n n CAA HAAA HEM sing 231 n n CBA CGA HEM sing 232 n n CBA HBA HEM sing 233 n n CBA HBAA HEM sing 234 n n CGA O1A HEM doub 235 n n CGA O2A HEM sing 236 n n C1B C2B HEM sing 237 n n C1B NB HEM sing 238 n n C2B C3B HEM doub 239 n n C2B CMB HEM sing 240 n n C3B C4B HEM sing 241 n n C3B CAB HEM sing 242 n n C4B NB HEM doub 243 n n CMB HMB HEM sing 244 n n CMB HMBA HEM sing 245 n n CMB HMBB HEM sing 246 n n CAB CBB HEM doub 247 n n CAB HAB HEM sing 248 n n CBB HBB HEM sing 249 n n CBB HBBA HEM sing 250 n n C1C C2C HEM sing 251 n y C1C NC HEM sing 252 n y C2C C3C HEM doub 253 n y C2C CMC HEM sing 254 n n C3C C4C HEM sing 255 n y C3C CAC HEM sing 256 n n C4C NC HEM sing 257 n y CMC HMC HEM sing 258 n n CMC HMCA HEM sing 259 n n CMC HMCB HEM sing 260 n n CAC CBC HEM doub 261 n n CAC HAC HEM sing 262 n n CBC HBC HEM sing 263 n n CBC HBCA HEM sing 264 n n C1D C2D HEM sing 265 n n C1D ND HEM doub 266 n n C2D C3D HEM doub 267 n n C2D CMD HEM sing 268 n n C3D C4D HEM sing 269 n n C3D CAD HEM sing 270 n n C4D ND HEM sing 271 n n CMD HMD HEM sing 272 n n CMD HMDA HEM sing 273 n n CMD HMDB HEM sing 274 n n CAD CBD HEM sing 275 n n CAD HAD HEM sing 276 n n CAD HADA HEM sing 277 n n CBD CGD HEM sing 278 n n CBD HBD HEM sing 279 n n CBD HBDA HEM sing 280 n n CGD O1D HEM doub 281 n n CGD O2D HEM sing 282 n n O2A H2A HEM sing 283 n n O2D H2D HEM sing 284 n n FE NA HEM sing 285 n n FE NB HEM sing 286 n n FE NC HEM sing 287 n n FE ND HEM sing 288 n n # _atom_sites.entry_id 9COU _atom_sites.fract_transf_matrix[1][1] 0.013028 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009925 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007906 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 500 HEM HEM . C 3 A1A4U A 1 602 700 A1A4U 156 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . B 2 -23.315 -30.533 -9.282 1 94.5 ? CHA HEM 601 A 1 HETATM 2 C CHB HEM . . . B 2 -22.667 -27.854 -13.286 1 93.88 ? CHB HEM 601 A 1 HETATM 3 C CHC HEM . . . B 2 -22.176 -23.873 -10.563 1 92.16 ? CHC HEM 601 A 1 HETATM 4 C CHD HEM . . . B 2 -22.9 -26.526 -6.557 1 97.15 ? CHD HEM 601 A 1 HETATM 5 C C1A HEM . . . B 2 -23.178 -30.162 -10.603 1 99.78 ? C1A HEM 601 A 1 HETATM 6 C C2A HEM . . . B 2 -23.246 -31.041 -11.753 1 94.86 ? C2A HEM 601 A 1 HETATM 7 C C3A HEM . . . B 2 -23.065 -30.3 -12.851 1 82.57 ? C3A HEM 601 A 1 HETATM 8 C C4A HEM . . . B 2 -22.879 -28.924 -12.444 1 77.36 ? C4A HEM 601 A 1 HETATM 9 C CMA HEM . . . B 2 -23.056 -30.805 -14.309 1 91 ? CMA HEM 601 A 1 HETATM 10 C CAA HEM . . . B 2 -23.478 -32.568 -11.708 1 86.38 ? CAA HEM 601 A 1 HETATM 11 C CBA HEM . . . B 2 -24.93 -32.891 -12.044 1 85.94 ? CBA HEM 601 A 1 HETATM 12 C CGA HEM . . . B 2 -25.116 -34.386 -12.07 1 91.73 ? CGA HEM 601 A 1 HETATM 13 O O1A HEM . . . B 2 -26.203 -34.848 -12.503 1 86.75 ? O1A HEM 601 A 1 HETATM 14 O O2A HEM . . . B 2 -24.176 -35.116 -11.662 1 94.53 ? O2A HEM 601 A 1 HETATM 15 C C1B HEM . . . B 2 -22.486 -26.543 -12.905 1 91.39 ? C1B HEM 601 A 1 HETATM 16 C C2B HEM . . . B 2 -22.289 -25.418 -13.798 1 93.12 ? C2B HEM 601 A 1 HETATM 17 C C3B HEM . . . B 2 -22.152 -24.31 -13.044 1 99.65 ? C3B HEM 601 A 1 HETATM 18 C C4B HEM . . . B 2 -22.26 -24.711 -11.654 1 95.99 ? C4B HEM 601 A 1 HETATM 19 C CMB HEM . . . B 2 -22.255 -25.556 -15.338 1 98.81 ? CMB HEM 601 A 1 HETATM 20 C CAB HEM . . . B 2 -21.919 -22.835 -13.47 1 103.38 ? CAB HEM 601 A 1 HETATM 21 C CBB HEM . . . B 2 -21.815 -22.41 -14.735 1 95.35 ? CBB HEM 601 A 1 HETATM 22 C C1C HEM . . . B 2 -22.379 -24.227 -9.246 1 99.83 ? C1C HEM 601 A 1 HETATM 23 C C2C HEM . . . B 2 -22.468 -23.317 -8.125 1 116.14 ? C2C HEM 601 A 1 HETATM 24 C C3C HEM . . . B 2 -22.668 -24.029 -7.012 1 108.35 ? C3C HEM 601 A 1 HETATM 25 C C4C HEM . . . B 2 -22.715 -25.437 -7.387 1 99.91 ? C4C HEM 601 A 1 HETATM 26 C CMC HEM . . . B 2 -22.35 -21.779 -8.202 1 105.6 ? CMC HEM 601 A 1 HETATM 27 C CAC HEM . . . B 2 -22.813 -23.398 -5.605 1 96.22 ? CAC HEM 601 A 1 HETATM 28 C CBC HEM . . . B 2 -22.959 -24.121 -4.489 1 109.61 ? CBC HEM 601 A 1 HETATM 29 C C1D HEM . . . B 2 -23.028 -27.846 -6.939 1 99.71 ? C1D HEM 601 A 1 HETATM 30 C C2D HEM . . . B 2 -23.12 -28.99 -6.052 1 99.93 ? C2D HEM 601 A 1 HETATM 31 C C3D HEM . . . B 2 -23.234 -30.09 -6.8 1 87.23 ? C3D HEM 601 A 1 HETATM 32 C C4D HEM . . . B 2 -23.22 -29.692 -8.193 1 94.2 ? C4D HEM 601 A 1 HETATM 33 C CMD HEM . . . B 2 -23.09 -28.951 -4.509 1 102.73 ? CMD HEM 601 A 1 HETATM 34 C CAD HEM . . . B 2 -23.364 -31.533 -6.268 1 85.8 ? CAD HEM 601 A 1 HETATM 35 C CBD HEM . . . B 2 -24.827 -31.95 -6.381 1 102 ? CBD HEM 601 A 1 HETATM 36 C CGD HEM . . . B 2 -25.11 -33.126 -5.484 1 102.18 ? CGD HEM 601 A 1 HETATM 37 O O1D HEM . . . B 2 -26.246 -33.203 -4.948 1 85.29 ? O1D HEM 601 A 1 HETATM 38 O O2D HEM . . . B 2 -24.204 -33.977 -5.294 1 112.39 ? O2D HEM 601 A 1 HETATM 39 N NA HEM . . . B 2 -22.955 -28.877 -11.064 1 94.4 ? NA HEM 601 A 1 HETATM 40 N NB HEM . . . B 2 -22.463 -26.075 -11.607 1 90.5 ? NB HEM 601 A 1 HETATM 41 N NC HEM . . . B 2 -22.534 -25.511 -8.758 1 91.43 ? NC HEM 601 A 1 HETATM 42 N ND HEM . . . B 2 -23.093 -28.316 -8.238 1 93.02 ? ND HEM 601 A 1 HETATM 43 FE FE HEM . . . B 2 -22.743 -27.197 -9.914 1 90.71 ? FE HEM 601 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 43 #