data_9COW # _model_server_result.job_id mujLqY1sAzcsWqcRhtHy7w _model_server_result.datetime_utc '2025-01-09 21:07:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9cow # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 9COW # _exptl.entry_id 9COW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9COW _cell.length_a 76.19 _cell.length_b 100.09 _cell.length_c 121.46 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9COW _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_545 x,-y-1,-z 1 0 0 0 -1 0 0 0 -1 0 -100.09 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc2 B FE HEM . A HEM 601 1_555 D N11 A1A4V . A A1A4V 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 225 n n CHA C4D HEM doub 226 n n CHA HHA HEM sing 227 n n CHB C4A HEM sing 228 n n CHB C1B HEM doub 229 n n CHB HHB HEM sing 230 n n CHC C4B HEM sing 231 n n CHC C1C HEM doub 232 n n CHC HHC HEM sing 233 n n CHD C4C HEM doub 234 n n CHD C1D HEM sing 235 n n CHD HHD HEM sing 236 n n C1A C2A HEM doub 237 n y C1A NA HEM sing 238 n y C2A C3A HEM sing 239 n y C2A CAA HEM sing 240 n n C3A C4A HEM doub 241 n y C3A CMA HEM sing 242 n n C4A NA HEM sing 243 n y CMA HMA HEM sing 244 n n CMA HMAA HEM sing 245 n n CMA HMAB HEM sing 246 n n CAA CBA HEM sing 247 n n CAA HAA HEM sing 248 n n CAA HAAA HEM sing 249 n n CBA CGA HEM sing 250 n n CBA HBA HEM sing 251 n n CBA HBAA HEM sing 252 n n CGA O1A HEM doub 253 n n CGA O2A HEM sing 254 n n C1B C2B HEM sing 255 n n C1B NB HEM sing 256 n n C2B C3B HEM doub 257 n n C2B CMB HEM sing 258 n n C3B C4B HEM sing 259 n n C3B CAB HEM sing 260 n n C4B NB HEM doub 261 n n CMB HMB HEM sing 262 n n CMB HMBA HEM sing 263 n n CMB HMBB HEM sing 264 n n CAB CBB HEM doub 265 n n CAB HAB HEM sing 266 n n CBB HBB HEM sing 267 n n CBB HBBA HEM sing 268 n n C1C C2C HEM sing 269 n y C1C NC HEM sing 270 n y C2C C3C HEM doub 271 n y C2C CMC HEM sing 272 n n C3C C4C HEM sing 273 n y C3C CAC HEM sing 274 n n C4C NC HEM sing 275 n y CMC HMC HEM sing 276 n n CMC HMCA HEM sing 277 n n CMC HMCB HEM sing 278 n n CAC CBC HEM doub 279 n n CAC HAC HEM sing 280 n n CBC HBC HEM sing 281 n n CBC HBCA HEM sing 282 n n C1D C2D HEM sing 283 n n C1D ND HEM doub 284 n n C2D C3D HEM doub 285 n n C2D CMD HEM sing 286 n n C3D C4D HEM sing 287 n n C3D CAD HEM sing 288 n n C4D ND HEM sing 289 n n CMD HMD HEM sing 290 n n CMD HMDA HEM sing 291 n n CMD HMDB HEM sing 292 n n CAD CBD HEM sing 293 n n CAD HAD HEM sing 294 n n CAD HADA HEM sing 295 n n CBD CGD HEM sing 296 n n CBD HBD HEM sing 297 n n CBD HBDA HEM sing 298 n n CGD O1D HEM doub 299 n n CGD O2D HEM sing 300 n n O2A H2A HEM sing 301 n n O2D H2D HEM sing 302 n n FE NA HEM sing 303 n n FE NB HEM sing 304 n n FE NC HEM sing 305 n n FE ND HEM sing 306 n n # _atom_sites.entry_id 9COW _atom_sites.fract_transf_matrix[1][1] 0.013125 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009991 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008233 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 500 HEM HEM . C 3 GOL A 1 602 600 GOL GOL . D 4 A1A4V A 1 603 700 A1A4V 422 . E 5 HOH A 1 701 1 HOH HOH . E 5 HOH A 2 702 33 HOH HOH . E 5 HOH A 3 703 13 HOH HOH . E 5 HOH A 4 704 27 HOH HOH . E 5 HOH A 5 705 6 HOH HOH . E 5 HOH A 6 706 16 HOH HOH . E 5 HOH A 7 707 39 HOH HOH . E 5 HOH A 8 708 40 HOH HOH . E 5 HOH A 9 709 11 HOH HOH . E 5 HOH A 10 710 24 HOH HOH . E 5 HOH A 11 711 2 HOH HOH . E 5 HOH A 12 712 20 HOH HOH . E 5 HOH A 13 713 29 HOH HOH . E 5 HOH A 14 714 3 HOH HOH . E 5 HOH A 15 715 41 HOH HOH . E 5 HOH A 16 716 31 HOH HOH . E 5 HOH A 17 717 38 HOH HOH . E 5 HOH A 18 718 17 HOH HOH . E 5 HOH A 19 719 21 HOH HOH . E 5 HOH A 20 720 25 HOH HOH . E 5 HOH A 21 721 37 HOH HOH . E 5 HOH A 22 722 5 HOH HOH . E 5 HOH A 23 723 18 HOH HOH . E 5 HOH A 24 724 8 HOH HOH . E 5 HOH A 25 725 22 HOH HOH . E 5 HOH A 26 726 14 HOH HOH . E 5 HOH A 27 727 7 HOH HOH . E 5 HOH A 28 728 30 HOH HOH . E 5 HOH A 29 729 12 HOH HOH . E 5 HOH A 30 730 19 HOH HOH . E 5 HOH A 31 731 10 HOH HOH . E 5 HOH A 32 732 28 HOH HOH . E 5 HOH A 33 733 4 HOH HOH . E 5 HOH A 34 734 32 HOH HOH . E 5 HOH A 35 735 23 HOH HOH . E 5 HOH A 36 736 35 HOH HOH . E 5 HOH A 37 737 36 HOH HOH . E 5 HOH A 38 738 26 HOH HOH . E 5 HOH A 39 739 15 HOH HOH . E 5 HOH A 40 740 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . B 2 -23.017 -29.775 -7.703 1 76.17 ? CHA HEM 601 A 1 HETATM 2 C CHB HEM . . . B 2 -22.139 -27.063 -11.639 1 78.16 ? CHB HEM 601 A 1 HETATM 3 C CHC HEM . . . B 2 -21.87 -23.124 -8.823 1 81.44 ? CHC HEM 601 A 1 HETATM 4 C CHD HEM . . . B 2 -22.516 -25.86 -4.865 1 80.81 ? CHD HEM 601 A 1 HETATM 5 C C1A HEM . . . B 2 -22.806 -29.394 -9.013 1 77.49 ? C1A HEM 601 A 1 HETATM 6 C C2A HEM . . . B 2 -22.815 -30.265 -10.172 1 79.26 ? C2A HEM 601 A 1 HETATM 7 C C3A HEM . . . B 2 -22.573 -29.518 -11.256 1 72.05 ? C3A HEM 601 A 1 HETATM 8 C C4A HEM . . . B 2 -22.403 -28.145 -10.826 1 78.13 ? C4A HEM 601 A 1 HETATM 9 C CMA HEM . . . B 2 -22.486 -30.018 -12.715 1 65.44 ? CMA HEM 601 A 1 HETATM 10 C CAA HEM . . . B 2 -23.059 -31.789 -10.151 1 70.4 ? CAA HEM 601 A 1 HETATM 11 C CBA HEM . . . B 2 -24.508 -32.071 -10.532 1 73.49 ? CBA HEM 601 A 1 HETATM 12 C CGA HEM . . . B 2 -24.682 -33.542 -10.802 1 71.68 ? CGA HEM 601 A 1 HETATM 13 O O1A HEM . . . B 2 -25.805 -33.952 -11.193 1 71.46 ? O1A HEM 601 A 1 HETATM 14 O O2A HEM . . . B 2 -23.695 -34.303 -10.63 1 67.27 ? O2A HEM 601 A 1 HETATM 15 C C1B HEM . . . B 2 -22.036 -25.751 -11.227 1 80.98 ? C1B HEM 601 A 1 HETATM 16 C C2B HEM . . . B 2 -21.915 -24.592 -12.091 1 79.55 ? C2B HEM 601 A 1 HETATM 17 C C3B HEM . . . B 2 -21.838 -23.497 -11.311 1 85.02 ? C3B HEM 601 A 1 HETATM 18 C C4B HEM . . . B 2 -21.912 -23.941 -9.932 1 78.76 ? C4B HEM 601 A 1 HETATM 19 C CMB HEM . . . B 2 -21.884 -24.68 -13.634 1 72.22 ? CMB HEM 601 A 1 HETATM 20 C CAB HEM . . . B 2 -21.702 -21.998 -11.698 1 79.62 ? CAB HEM 601 A 1 HETATM 21 C CBB HEM . . . B 2 -21.684 -21.518 -12.947 1 79.35 ? CBB HEM 601 A 1 HETATM 22 C C1C HEM . . . B 2 -22.051 -23.507 -7.512 1 81.52 ? C1C HEM 601 A 1 HETATM 23 C C2C HEM . . . B 2 -22.129 -22.619 -6.373 1 92.19 ? C2C HEM 601 A 1 HETATM 24 C C3C HEM . . . B 2 -22.307 -23.354 -5.273 1 83.82 ? C3C HEM 601 A 1 HETATM 25 C C4C HEM . . . B 2 -22.351 -24.754 -5.675 1 84.13 ? C4C HEM 601 A 1 HETATM 26 C CMC HEM . . . B 2 -22.021 -21.079 -6.42 1 81.85 ? CMC HEM 601 A 1 HETATM 27 C CAC HEM . . . B 2 -22.435 -22.754 -3.853 1 87.89 ? CAC HEM 601 A 1 HETATM 28 C CBC HEM . . . B 2 -22.557 -23.509 -2.758 1 94.36 ? CBC HEM 601 A 1 HETATM 29 C C1D HEM . . . B 2 -22.659 -27.166 -5.283 1 79.37 ? C1D HEM 601 A 1 HETATM 30 C C2D HEM . . . B 2 -22.736 -28.335 -4.43 1 77.95 ? C2D HEM 601 A 1 HETATM 31 C C3D HEM . . . B 2 -22.871 -29.409 -5.212 1 81.52 ? C3D HEM 601 A 1 HETATM 32 C C4D HEM . . . B 2 -22.89 -28.968 -6.591 1 72.73 ? C4D HEM 601 A 1 HETATM 33 C CMD HEM . . . B 2 -22.666 -28.336 -2.886 1 74.9 ? CMD HEM 601 A 1 HETATM 34 C CAD HEM . . . B 2 -22.996 -30.871 -4.734 1 69.42 ? CAD HEM 601 A 1 HETATM 35 C CBD HEM . . . B 2 -24.456 -31.144 -4.391 1 77.68 ? CBD HEM 601 A 1 HETATM 36 C CGD HEM . . . B 2 -24.601 -32.528 -3.815 1 84.01 ? CGD HEM 601 A 1 HETATM 37 O O1D HEM . . . B 2 -25.717 -32.862 -3.34 1 84.46 ? O1D HEM 601 A 1 HETATM 38 O O2D HEM . . . B 2 -23.603 -33.294 -3.827 1 80.29 ? O2D HEM 601 A 1 HETATM 39 N NA HEM . . . B 2 -22.553 -28.108 -9.452 1 82.66 ? NA HEM 601 A 1 HETATM 40 N NB HEM . . . B 2 -22.031 -25.316 -9.918 1 88.33 ? NB HEM 601 A 1 HETATM 41 N NC HEM . . . B 2 -22.19 -24.801 -7.048 1 88.23 ? NC HEM 601 A 1 HETATM 42 N ND HEM . . . B 2 -22.758 -27.592 -6.595 1 85.39 ? ND HEM 601 A 1 HETATM 43 FE FE HEM . . . B 2 -22.331 -26.463 -8.246 1 70.67 ? FE HEM 601 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 43 #