data_9COX
#
_model_server_result.job_id            CWqWrfOEgwZAGU8oLgDFwg 
_model_server_result.datetime_utc      '2025-02-05 09:52:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9cox 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    9COX 
#
_exptl.entry_id    9COX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9COX 
_cell.length_a            75.599 
_cell.length_b            100.95 
_cell.length_c            123.64 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9COX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C 1 1 
A,B,C 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 422 A CYS 442 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? 
metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N33 A1A4K . A A1A4K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 212 n n 
CHA C4D HEM doub 213 n n 
CHA HHA HEM sing 214 n n 
CHB C4A HEM sing 215 n n 
CHB C1B HEM doub 216 n n 
CHB HHB HEM sing 217 n n 
CHC C4B HEM sing 218 n n 
CHC C1C HEM doub 219 n n 
CHC HHC HEM sing 220 n n 
CHD C4C HEM doub 221 n n 
CHD C1D HEM sing 222 n n 
CHD HHD HEM sing 223 n n 
C1A C2A HEM doub 224 n y 
C1A NA HEM sing 225 n y 
C2A C3A HEM sing 226 n y 
C2A CAA HEM sing 227 n n 
C3A C4A HEM doub 228 n y 
C3A CMA HEM sing 229 n n 
C4A NA HEM sing 230 n y 
CMA HMA HEM sing 231 n n 
CMA HMAA HEM sing 232 n n 
CMA HMAB HEM sing 233 n n 
CAA CBA HEM sing 234 n n 
CAA HAA HEM sing 235 n n 
CAA HAAA HEM sing 236 n n 
CBA CGA HEM sing 237 n n 
CBA HBA HEM sing 238 n n 
CBA HBAA HEM sing 239 n n 
CGA O1A HEM doub 240 n n 
CGA O2A HEM sing 241 n n 
C1B C2B HEM sing 242 n n 
C1B NB HEM sing 243 n n 
C2B C3B HEM doub 244 n n 
C2B CMB HEM sing 245 n n 
C3B C4B HEM sing 246 n n 
C3B CAB HEM sing 247 n n 
C4B NB HEM doub 248 n n 
CMB HMB HEM sing 249 n n 
CMB HMBA HEM sing 250 n n 
CMB HMBB HEM sing 251 n n 
CAB CBB HEM doub 252 n n 
CAB HAB HEM sing 253 n n 
CBB HBB HEM sing 254 n n 
CBB HBBA HEM sing 255 n n 
C1C C2C HEM sing 256 n y 
C1C NC HEM sing 257 n y 
C2C C3C HEM doub 258 n y 
C2C CMC HEM sing 259 n n 
C3C C4C HEM sing 260 n y 
C3C CAC HEM sing 261 n n 
C4C NC HEM sing 262 n y 
CMC HMC HEM sing 263 n n 
CMC HMCA HEM sing 264 n n 
CMC HMCB HEM sing 265 n n 
CAC CBC HEM doub 266 n n 
CAC HAC HEM sing 267 n n 
CBC HBC HEM sing 268 n n 
CBC HBCA HEM sing 269 n n 
C1D C2D HEM sing 270 n n 
C1D ND HEM doub 271 n n 
C2D C3D HEM doub 272 n n 
C2D CMD HEM sing 273 n n 
C3D C4D HEM sing 274 n n 
C3D CAD HEM sing 275 n n 
C4D ND HEM sing 276 n n 
CMD HMD HEM sing 277 n n 
CMD HMDA HEM sing 278 n n 
CMD HMDB HEM sing 279 n n 
CAD CBD HEM sing 280 n n 
CAD HAD HEM sing 281 n n 
CAD HADA HEM sing 282 n n 
CBD CGD HEM sing 283 n n 
CBD HBD HEM sing 284 n n 
CBD HBDA HEM sing 285 n n 
CGD O1D HEM doub 286 n n 
CGD O2D HEM sing 287 n n 
O2A H2A HEM sing 288 n n 
O2D H2D HEM sing 289 n n 
FE NA HEM sing 290 n n 
FE NB HEM sing 291 n n 
FE NC HEM sing 292 n n 
FE ND HEM sing 293 n n 
#
_atom_sites.entry_id                     9COX 
_atom_sites.fract_transf_matrix[1][1]    0.013228 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009906 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008088 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 601 500 HEM HEM . 
C 3 A1A4K A 1 602 700 A1A4K 132 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . B 2 -14.93 -19.905 -8.539 1 73.1 ? CHA HEM 601 A 1 
HETATM 2 C CHB HEM . . . B 2 -15.803 -22.619 -12.476 1 80.29 ? CHB HEM 601 A 1 
HETATM 3 C CHC HEM . . . B 2 -16.25 -26.55 -9.672 1 90.57 ? CHC HEM 601 A 1 
HETATM 4 C CHD HEM . . . B 2 -15.242 -23.877 -5.743 1 84.38 ? CHD HEM 601 A 1 
HETATM 5 C C1A HEM . . . B 2 -15.132 -20.287 -9.848 1 80.67 ? C1A HEM 601 A 1 
HETATM 6 C C2A HEM . . . B 2 -15.1 -19.424 -11.013 1 82.99 ? C2A HEM 601 A 1 
HETATM 7 C C3A HEM . . . B 2 -15.341 -20.173 -12.091 1 74.59 ? C3A HEM 601 A 1 
HETATM 8 C C4A HEM . . . B 2 -15.533 -21.541 -11.66 1 65.32 ? C4A HEM 601 A 1 
HETATM 9 C CMA HEM . . . B 2 -15.403 -19.676 -13.55 1 65.74 ? CMA HEM 601 A 1 
HETATM 10 C CAA HEM . . . B 2 -14.841 -17.902 -11.011 1 70.06 ? CAA HEM 601 A 1 
HETATM 11 C CBA HEM . . . B 2 -13.384 -17.617 -11.357 1 61.62 ? CBA HEM 601 A 1 
HETATM 12 C CGA HEM . . . B 2 -13.196 -16.135 -11.554 1 80.33 ? CGA HEM 601 A 1 
HETATM 13 O O1A HEM . . . B 2 -12.047 -15.713 -11.844 1 64.23 ? O1A HEM 601 A 1 
HETATM 14 O O2A HEM . . . B 2 -14.192 -15.377 -11.424 1 91.96 ? O2A HEM 601 A 1 
HETATM 15 C C1B HEM . . . B 2 -15.969 -23.925 -12.069 1 84.03 ? C1B HEM 601 A 1 
HETATM 16 C C2B HEM . . . B 2 -16.154 -25.07 -12.937 1 94.48 ? C2B HEM 601 A 1 
HETATM 17 C C3B HEM . . . B 2 -16.278 -26.165 -12.161 1 95.18 ? C3B HEM 601 A 1 
HETATM 18 C C4B HEM . . . B 2 -16.176 -25.733 -10.78 1 86.86 ? C4B HEM 601 A 1 
HETATM 19 C CMB HEM . . . B 2 -16.186 -24.963 -14.48 1 92.83 ? CMB HEM 601 A 1 
HETATM 20 C CAB HEM . . . B 2 -16.495 -27.651 -12.552 1 101.48 ? CAB HEM 601 A 1 
HETATM 21 C CBB HEM . . . B 2 -16.636 -28.102 -13.804 1 102.06 ? CBB HEM 601 A 1 
HETATM 22 C C1C HEM . . . B 2 -15.964 -26.19 -8.372 1 91.43 ? C1C HEM 601 A 1 
HETATM 23 C C2C HEM . . . B 2 -15.833 -27.092 -7.247 1 96.01 ? C2C HEM 601 A 1 
HETATM 24 C C3C HEM . . . B 2 -15.559 -26.374 -6.154 1 93.27 ? C3C HEM 601 A 1 
HETATM 25 C C4C HEM . . . B 2 -15.498 -24.971 -6.548 1 86.05 ? C4C HEM 601 A 1 
HETATM 26 C CMC HEM . . . B 2 -15.995 -28.626 -7.302 1 100.71 ? CMC HEM 601 A 1 
HETATM 27 C CAC HEM . . . B 2 -15.351 -26.993 -4.749 1 94.12 ? CAC HEM 601 A 1 
HETATM 28 C CBC HEM . . . B 2 -15.182 -26.26 -3.643 1 111.79 ? CBC HEM 601 A 1 
HETATM 29 C C1D HEM . . . B 2 -15.127 -22.562 -6.149 1 79.91 ? C1D HEM 601 A 1 
HETATM 30 C C2D HEM . . . B 2 -14.998 -21.406 -5.283 1 77.4 ? C2D HEM 601 A 1 
HETATM 31 C C3D HEM . . . B 2 -14.913 -20.317 -6.051 1 77.27 ? C3D HEM 601 A 1 
HETATM 32 C C4D HEM . . . B 2 -14.982 -20.733 -7.437 1 69.37 ? C4D HEM 601 A 1 
HETATM 33 C CMD HEM . . . B 2 -14.966 -21.422 -3.739 1 81.23 ? CMD HEM 601 A 1 
HETATM 34 C CAD HEM . . . B 2 -14.759 -18.866 -5.548 1 70.1 ? CAD HEM 601 A 1 
HETATM 35 C CBD HEM . . . B 2 -13.28 -18.5 -5.637 1 82.92 ? CBD HEM 601 A 1 
HETATM 36 C CGD HEM . . . B 2 -12.99 -17.267 -4.823 1 81.31 ? CGD HEM 601 A 1 
HETATM 37 O O1D HEM . . . B 2 -11.847 -17.149 -4.31 1 76.68 ? O1D HEM 601 A 1 
HETATM 38 O O2D HEM . . . B 2 -13.898 -16.409 -4.676 1 76.8 ? O2D HEM 601 A 1 
HETATM 39 N NA HEM . . . B 2 -15.398 -21.572 -10.284 1 66.98 ? NA HEM 601 A 1 
HETATM 40 N NB HEM . . . B 2 -15.988 -24.366 -10.761 1 85.28 ? NB HEM 601 A 1 
HETATM 41 N NC HEM . . . B 2 -15.753 -24.905 -7.907 1 80.51 ? NC HEM 601 A 1 
HETATM 42 N ND HEM . . . B 2 -15.114 -22.11 -7.456 1 81.13 ? ND HEM 601 A 1 
HETATM 43 FE FE HEM . . . B 2 -15.602 -23.228 -9.098 1 78.42 ? FE HEM 601 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           43 
#