data_9CP1 # _model_server_result.job_id bl7o5axrRgqhK834Q5Fc9w _model_server_result.datetime_utc '2025-07-27 15:44:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9cp1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":401}' # _entry.id 9CP1 # _exptl.entry_id 9CP1 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 122.143 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9CP1 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9CP1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details nonameric _pdbx_struct_assembly.oligomeric_count 9 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 K N N ? 5 L N N ? 5 M N N ? 5 N N N ? 5 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog WATSON-CRICK hydrog1 H N1 A 19 S A 19 1_555 I N3 DT 11 M DT 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 H N6 A 19 S A 19 1_555 I O4 DT 11 M DT 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 H N1 G 21 S G 21 1_555 I N3 DC 9 M DC 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 H N2 G 21 S G 21 1_555 I O2 DC 9 M DC 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 H O6 G 21 S G 21 1_555 I N4 DC 9 M DC 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 H N1 A 22 S A 22 1_555 I N3 DT 8 M DT 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 H N6 A 22 S A 22 1_555 I O4 DT 8 M DT 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 H N1 A 23 S A 23 1_555 I N3 DT 7 M DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 H N6 A 23 S A 23 1_555 I O4 DT 7 M DT 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 H N1 A 24 S A 24 1_555 I N3 DT 6 M DT 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 H N6 A 24 S A 24 1_555 I O4 DT 6 M DT 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 H N1 A 25 S A 25 1_555 I N3 DT 5 M DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 H N6 A 25 S A 25 1_555 I O4 DT 5 M DT 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 H N3 C 27 S C 27 1_555 I N1 DG 3 M DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 H N4 C 27 S C 27 1_555 I O6 DG 3 M DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 H O2 C 27 S C 27 1_555 I N2 DG 3 M DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 H N3 C 28 S C 28 1_555 I N1 DG 2 M DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 H N4 C 28 S C 28 1_555 I O6 DG 2 M DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 H O2 C 28 S C 28 1_555 I N2 DG 2 M DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 H N1 G 29 S G 29 1_555 I N3 DC 1 M DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 H N2 G 29 S G 29 1_555 I O2 DC 1 M DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 H O6 G 29 S G 29 1_555 I N4 DC 1 M DC 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 558 n n C C2 TRS sing 559 n n C C3 TRS sing 560 n n C N TRS sing 561 n n C1 O1 TRS sing 562 n n C1 H11 TRS sing 563 n n C1 H12 TRS sing 564 n n C2 O2 TRS sing 565 n n C2 H21 TRS sing 566 n n C2 H22 TRS sing 567 n n C3 O3 TRS sing 568 n n C3 H31 TRS sing 569 n n C3 H32 TRS sing 570 n n N HN1 TRS sing 571 n n N HN2 TRS sing 572 n n N HN3 TRS sing 573 n n O1 HO1 TRS sing 574 n n O2 HO2 TRS sing 575 n n O3 HO3 TRS sing 576 n n # _atom_sites.entry_id 9CP1 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 5 TRS F 1 401 401 TRS TRS . K 5 TRS B 1 401 401 TRS TRS . L 5 TRS C 1 401 401 TRS TRS . M 5 TRS E 1 401 401 TRS TRS . N 5 TRS D 1 401 401 TRS TRS . O 5 TRS A 1 401 401 TRS TRS . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . N 5 184.105 171.308 227.272 1 122.75 ? C TRS 401 D 1 HETATM 2 C C1 TRS . . . N 5 184.959 170.664 226.191 1 122.75 ? C1 TRS 401 D 1 HETATM 3 C C2 TRS . . . N 5 182.996 172.111 226.61 1 122.75 ? C2 TRS 401 D 1 HETATM 4 C C3 TRS . . . N 5 184.949 172.213 228.157 1 122.75 ? C3 TRS 401 D 1 HETATM 5 N N TRS . . . N 5 183.507 170.261 228.102 1 122.75 ? N TRS 401 D 1 HETATM 6 O O1 TRS . . . N 5 184.952 171.498 225.055 1 122.75 ? O1 TRS 401 D 1 HETATM 7 O O2 TRS . . . N 5 182.63 171.493 225.397 1 122.75 ? O2 TRS 401 D 1 HETATM 8 O O3 TRS . . . N 5 184.14 172.767 229.17 1 122.75 ? O3 TRS 401 D 1 HETATM 9 H H11 TRS . . . N 5 184.612 169.786 225.966 1 122.75 ? H11 TRS 401 D 1 HETATM 10 H H12 TRS . . . N 5 185.866 170.537 226.51 1 122.75 ? H12 TRS 401 D 1 HETATM 11 H H21 TRS . . . N 5 183.295 173.019 226.445 1 122.75 ? H21 TRS 401 D 1 HETATM 12 H H22 TRS . . . N 5 182.228 172.168 227.2 1 122.75 ? H22 TRS 401 D 1 HETATM 13 H H31 TRS . . . N 5 185.349 172.92 227.626 1 122.75 ? H31 TRS 401 D 1 HETATM 14 H H32 TRS . . . N 5 185.677 171.708 228.551 1 122.75 ? H32 TRS 401 D 1 HETATM 15 H HN1 TRS . . . N 5 184.053 169.6 228.168 1 122.75 ? HN1 TRS 401 D 1 HETATM 16 H HN2 TRS . . . N 5 182.774 169.992 227.741 1 122.75 ? HN2 TRS 401 D 1 HETATM 17 H HN3 TRS . . . N 5 183.342 170.575 228.885 1 122.75 ? HN3 TRS 401 D 1 HETATM 18 H HO1 TRS . . . N 5 184.223 171.411 224.648 1 122.75 ? HO1 TRS 401 D 1 HETATM 19 H HO2 TRS . . . N 5 182.51 172.08 224.808 1 122.75 ? HO2 TRS 401 D 1 HETATM 20 H HO3 TRS . . . N 5 184.606 173.266 229.66 1 122.75 ? HO3 TRS 401 D 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #