data_9CPI # _model_server_result.job_id 8Z6d70yJ9CC4GdU4nuP2ew _model_server_result.datetime_utc '2024-10-12 14:28:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9cpi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 9CPI # _exptl.entry_id 9CPI _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 376.455 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[1-(2-aminoethyl)-4,5-dihydro-1H-imidazol-2-yl]-N-[4-(4,5-dihydro-1H-imidazol-2-yl)phenyl]benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9CPI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog WATSON-CRICK hydrog1 A N1 G 1 A G 1 1_555 B N3 C 13 B C 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N2 G 1 A G 1 1_555 B O2 C 13 B C 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O6 G 1 A G 1 1_555 B N4 C 13 B C 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 A 2 A A 2 1_555 B N3 U 12 B U 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N6 A 2 A A 2 1_555 B O4 U 12 B U 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N3 C 3 A C 3 1_555 B N1 G 11 B G 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N4 C 3 A C 3 1_555 B O6 G 11 B G 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A O2 C 3 A C 3 1_555 B N2 G 11 B G 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N1 A 4 A A 4 1_555 B N3 U 10 B U 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N6 A 4 A A 4 1_555 B O4 U 10 B U 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N1 G 5 A G 5 1_555 B N3 C 9 B C 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N2 G 5 A G 5 1_555 B O2 C 9 B C 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O6 G 5 A G 5 1_555 B N4 C 9 B C 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N3 C 6 A C 6 1_555 B N1 G 8 B G 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N4 C 6 A C 6 1_555 B O6 G 8 B G 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O2 C 6 A C 6 1_555 B N2 G 8 B G 21 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_12_PAIR hydrog17 A N3 U 7 A U 7 1_555 B O4 U 7 B U 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_12_PAIR hydrog18 A O4 U 7 A U 7 1_555 B N3 U 7 B U 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N1 G 8 A G 8 1_555 B N3 C 6 B C 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N2 G 8 A G 8 1_555 B O2 C 6 B C 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A O6 G 8 A G 8 1_555 B N4 C 6 B C 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N3 C 9 A C 9 1_555 B N1 G 5 B G 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A N4 C 9 A C 9 1_555 B O6 G 5 B G 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A O2 C 9 A C 9 1_555 B N2 G 5 B G 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A N3 U 10 A U 10 1_555 B N1 A 4 B A 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A O4 U 10 A U 10 1_555 B N6 A 4 B A 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A N1 G 11 A G 11 1_555 B N3 C 3 B C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A N2 G 11 A G 11 1_555 B O2 C 3 B C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A O6 G 11 A G 11 1_555 B N4 C 3 B C 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 A N3 U 12 A U 12 1_555 B N1 A 2 B A 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 A O4 U 12 A U 12 1_555 B N6 A 2 B A 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 A N3 C 13 A C 13 1_555 B N1 G 1 B G 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog33 A N4 C 13 A C 13 1_555 B O6 G 1 B G 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog34 A O2 C 13 A C 13 1_555 B N2 G 1 B G 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C21 H24 N6 O' _chem_comp.formula_weight 376.455 _chem_comp.id A1AZL _chem_comp.mon_nstd_flag . _chem_comp.name 4-[1-(2-aminoethyl)-4,5-dihydro-1H-imidazol-2-yl]-N-[4-(4,5-dihydro-1H-imidazol-2-yl)phenyl]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 C18 A1AZL sing 40 n n C19 N5 A1AZL sing 41 n n C18 N4 A1AZL sing 42 n n N5 C20 A1AZL sing 43 n n N5 C17 A1AZL sing 44 n n C20 C21 A1AZL sing 45 n n C21 N6 A1AZL sing 46 n n N4 C17 A1AZL doub 47 n n C17 C8 A1AZL sing 48 n n C8 C9 A1AZL doub 49 n y C8 C13 A1AZL sing 50 n y C9 C10 A1AZL sing 51 n y C13 C12 A1AZL doub 52 n y C10 C11 A1AZL doub 53 n y C12 C11 A1AZL sing 54 n y C11 C7 A1AZL sing 55 n n C7 N3 A1AZL sing 56 n n C7 O1 A1AZL doub 57 n n N3 C4 A1AZL sing 58 n n C5 C4 A1AZL doub 59 n y C5 C6 A1AZL sing 60 n y C4 C3 A1AZL sing 61 n y C6 C1 A1AZL doub 62 n y C3 C2 A1AZL doub 63 n y C1 C2 A1AZL sing 64 n y C1 C14 A1AZL sing 65 n n N1 C14 A1AZL doub 66 n n N1 C15 A1AZL sing 67 n n C14 N2 A1AZL sing 68 n n C15 C16 A1AZL sing 69 n n N2 C16 A1AZL sing 70 n n C2 H2 A1AZL sing 71 n n N2 H24 A1AZL sing 72 n n C3 H4 A1AZL sing 73 n n N3 H26 A1AZL sing 74 n n C5 H3 A1AZL sing 75 n n C6 H1 A1AZL sing 76 n n N6 H21 A1AZL sing 77 n n N6 H22 A1AZL sing 78 n n C9 H8 A1AZL sing 79 n n C10 H6 A1AZL sing 80 n n C12 H5 A1AZL sing 81 n n C13 H7 A1AZL sing 82 n n C15 H12 A1AZL sing 83 n n C15 H11 A1AZL sing 84 n n C16 H10 A1AZL sing 85 n n C16 H9 A1AZL sing 86 n n C18 H14 A1AZL sing 87 n n C18 H13 A1AZL sing 88 n n C19 H15 A1AZL sing 89 n n C19 H16 A1AZL sing 90 n n C20 H17 A1AZL sing 91 n n C20 H18 A1AZL sing 92 n n C21 H20 A1AZL sing 93 n n C21 H19 A1AZL sing 94 n n # _atom_sites.entry_id 9CPI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id A1AZL _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 27 _pdbx_nonpoly_scheme.pdb_mon_id A1AZL _pdbx_nonpoly_scheme.auth_mon_id D6L _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 A1AZL . . . C 2 -5.663 1.641 22.038 1 0 ? C1 A1AZL 101 B 1 HETATM 2 N N1 A1AZL . . . C 2 -5.182 3.862 23.042 1 0 ? N1 A1AZL 101 B 1 HETATM 3 O O1 A1AZL . . . C 2 -2.903 -1.775 19.534 1 0 ? O1 A1AZL 101 B 1 HETATM 4 C C2 A1AZL . . . C 2 -5.508 0.262 22.279 1 0 ? C2 A1AZL 101 B 1 HETATM 5 N N2 A1AZL . . . C 2 -5.735 2.181 24.458 1 0 ? N2 A1AZL 101 B 1 HETATM 6 C C3 A1AZL . . . C 2 -5.267 -0.625 21.223 1 0 ? C3 A1AZL 101 B 1 HETATM 7 N N3 A1AZL . . . C 2 -4.946 -1.038 18.83 1 0 ? N3 A1AZL 101 B 1 HETATM 8 C C4 A1AZL . . . C 2 -5.221 -0.158 19.912 1 0 ? C4 A1AZL 101 B 1 HETATM 9 N N4 A1AZL . . . C 2 -3.509 -5.348 13.069 1 0 ? N4 A1AZL 101 B 1 HETATM 10 C C5 A1AZL . . . C 2 -5.408 1.21 19.642 1 0 ? C5 A1AZL 101 B 1 HETATM 11 N N5 A1AZL . . . C 2 -2.646 -3.347 12.474 1 0 ? N5 A1AZL 101 B 1 HETATM 12 C C6 A1AZL . . . C 2 -5.615 2.106 20.701 1 0 ? C6 A1AZL 101 B 1 HETATM 13 N N6 A1AZL . . . C 2 0.788 -1.687 12.743 1 0 ? N6 A1AZL 101 B 1 HETATM 14 C C7 A1AZL . . . C 2 -3.767 -1.757 18.666 1 0 ? C7 A1AZL 101 B 1 HETATM 15 C C8 A1AZL . . . C 2 -3.115 -3.698 14.855 1 0 ? C8 A1AZL 101 B 1 HETATM 16 C C9 A1AZL . . . C 2 -4.34 -3.067 15.114 1 0 ? C9 A1AZL 101 B 1 HETATM 17 C C10 A1AZL . . . C 2 -4.579 -2.446 16.343 1 0 ? C10 A1AZL 101 B 1 HETATM 18 C C11 A1AZL . . . C 2 -3.597 -2.499 17.359 1 0 ? C11 A1AZL 101 B 1 HETATM 19 C C12 A1AZL . . . C 2 -2.406 -3.205 17.119 1 0 ? C12 A1AZL 101 B 1 HETATM 20 C C13 A1AZL . . . C 2 -2.158 -3.805 15.879 1 0 ? C13 A1AZL 101 B 1 HETATM 21 C C14 A1AZL . . . C 2 -5.784 2.621 23.145 1 0 ? C14 A1AZL 101 B 1 HETATM 22 C C15 A1AZL . . . C 2 -4.698 4.304 24.35 1 0 ? C15 A1AZL 101 B 1 HETATM 23 C C16 A1AZL . . . C 2 -5.051 3.139 25.312 1 0 ? C16 A1AZL 101 B 1 HETATM 24 C C17 A1AZL . . . C 2 -2.81 -4.247 13.513 1 0 ? C17 A1AZL 101 B 1 HETATM 25 C C18 A1AZL . . . C 2 -3.783 -5.239 11.623 1 0 ? C18 A1AZL 101 B 1 HETATM 26 C C19 A1AZL . . . C 2 -2.996 -3.977 11.203 1 0 ? C19 A1AZL 101 B 1 HETATM 27 C C20 A1AZL . . . C 2 -1.673 -2.247 12.491 1 0 ? C20 A1AZL 101 B 1 HETATM 28 C C21 A1AZL . . . C 2 -0.232 -2.781 12.655 1 0 ? C21 A1AZL 101 B 1 HETATM 29 H H2 A1AZL . . . C 2 -5.577 -0.134 23.282 1 0 ? H2 A1AZL 101 B 1 HETATM 30 H H24 A1AZL . . . C 2 -5.503 1.206 24.583 1 0 ? H24 A1AZL 101 B 1 HETATM 31 H H4 A1AZL . . . C 2 -5.112 -1.692 21.427 1 0 ? H4 A1AZL 101 B 1 HETATM 32 H H26 A1AZL . . . C 2 -5.638 -1.048 18.086 1 0 ? H26 A1AZL 101 B 1 HETATM 33 H H3 A1AZL . . . C 2 -5.382 1.596 18.635 1 0 ? H3 A1AZL 101 B 1 HETATM 34 H H1 A1AZL . . . C 2 -5.744 3.164 20.477 1 0 ? H1 A1AZL 101 B 1 HETATM 35 H H21 A1AZL . . . C 2 1.733 -2.085 12.729 1 0 ? H21 A1AZL 101 B 1 HETATM 36 H H22 A1AZL . . . C 2 0.662 -1.119 13.598 1 0 ? H22 A1AZL 101 B 1 HETATM 37 H H8 A1AZL . . . C 2 -5.095 -3.014 14.338 1 0 ? H8 A1AZL 101 B 1 HETATM 38 H H6 A1AZL . . . C 2 -5.517 -1.927 16.505 1 0 ? H6 A1AZL 101 B 1 HETATM 39 H H5 A1AZL . . . C 2 -1.655 -3.269 17.887 1 0 ? H5 A1AZL 101 B 1 HETATM 40 H H7 A1AZL . . . C 2 -1.208 -4.318 15.723 1 0 ? H7 A1AZL 101 B 1 HETATM 41 H H12 A1AZL . . . C 2 -5.217 5.243 24.658 1 0 ? H12 A1AZL 101 B 1 HETATM 42 H H11 A1AZL . . . C 2 -3.615 4.463 24.328 1 0 ? H11 A1AZL 101 B 1 HETATM 43 H H10 A1AZL . . . C 2 -5.681 3.493 26.135 1 0 ? H10 A1AZL 101 B 1 HETATM 44 H H9 A1AZL . . . C 2 -4.159 2.679 25.715 1 0 ? H9 A1AZL 101 B 1 HETATM 45 H H14 A1AZL . . . C 2 -3.422 -6.098 11.073 1 0 ? H14 A1AZL 101 B 1 HETATM 46 H H13 A1AZL . . . C 2 -4.853 -5.102 11.436 1 0 ? H13 A1AZL 101 B 1 HETATM 47 H H15 A1AZL . . . C 2 -3.634 -3.32 10.584 1 0 ? H15 A1AZL 101 B 1 HETATM 48 H H16 A1AZL . . . C 2 -2.086 -4.26 10.672 1 0 ? H16 A1AZL 101 B 1 HETATM 49 H H17 A1AZL . . . C 2 -1.919 -1.553 13.304 1 0 ? H17 A1AZL 101 B 1 HETATM 50 H H18 A1AZL . . . C 2 -1.742 -1.696 11.551 1 0 ? H18 A1AZL 101 B 1 HETATM 51 H H20 A1AZL . . . C 2 0.038 -3.396 11.806 1 0 ? H20 A1AZL 101 B 1 HETATM 52 H H19 A1AZL . . . C 2 -0.165 -3.363 13.578 1 0 ? H19 A1AZL 101 B 1 HETATM 53 H H23 A1AZL . . . C 2 0.71 -1.071 11.923 1 0 ? H23 A1AZL 101 B 1 HETATM 54 H H25 A1AZL . . . C 2 -4.528 3.98 22.265 1 0 ? H25 A1AZL 101 B 1 HETATM 55 H H27 A1AZL . . . C 2 -4.253 -5.666 13.685 1 0 ? H27 A1AZL 101 B 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 41 _model_server_stats.query_time_ms 5593 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 55 #