data_9CSI
#
_model_server_result.job_id            6wYnqxWsjdKm76M-Ns6Eow 
_model_server_result.datetime_utc      '2024-11-15 15:42:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9csi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    9CSI 
#
_exptl.entry_id    9CSI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              506.196 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9CSI 
_cell.length_a            70.277 
_cell.length_b            83.157 
_cell.length_c            338.094 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9CSI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,B,C,D,E,F 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'point symmetry operation' ? ? -1 0 0 0 -1 0 0 0 1 0 -83.157 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 398 A THR 375 1_555 D MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? 
metalc ? metalc2 B O3G ANP . A ANP 601 1_555 D MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? 
metalc ? metalc3 B O2B ANP . A ANP 601 1_555 D MG MG . A MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc4 D MG MG . A MG 603 1_555 F O HOH . A HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc5 D MG MG . A MG 603 1_555 F O HOH . A HOH 721 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.949 ? 
#
_chem_comp.formula           'C10 H17 N6 O12 P3' 
_chem_comp.formula_weight    506.196 
_chem_comp.id                ANP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ANP doub 112 n n 
PG O2G ANP sing 113 n n 
PG O3G ANP sing 114 n n 
PG N3B ANP sing 115 n n 
O2G HOG2 ANP sing 116 n n 
O3G HOG3 ANP sing 117 n n 
PB O1B ANP doub 118 n n 
PB O2B ANP sing 119 n n 
PB N3B ANP sing 120 n n 
PB O3A ANP sing 121 n n 
O2B HOB2 ANP sing 122 n n 
N3B HNB1 ANP sing 123 n n 
PA O1A ANP doub 124 n n 
PA O2A ANP sing 125 n n 
PA O3A ANP sing 126 n n 
PA O5' ANP sing 127 n n 
O2A HOA2 ANP sing 128 n n 
O5' C5' ANP sing 129 n n 
C5' C4' ANP sing 130 n n 
C5' "H5'1" ANP sing 131 n n 
C5' "H5'2" ANP sing 132 n n 
C4' O4' ANP sing 133 n n 
C4' C3' ANP sing 134 n n 
C4' H4' ANP sing 135 n n 
O4' C1' ANP sing 136 n n 
C3' O3' ANP sing 137 n n 
C3' C2' ANP sing 138 n n 
C3' H3' ANP sing 139 n n 
O3' HO3' ANP sing 140 n n 
C2' O2' ANP sing 141 n n 
C2' C1' ANP sing 142 n n 
C2' H2' ANP sing 143 n n 
O2' HO2' ANP sing 144 n n 
C1' N9 ANP sing 145 n n 
C1' H1' ANP sing 146 n n 
N9 C8 ANP sing 147 n y 
N9 C4 ANP sing 148 n y 
C8 N7 ANP doub 149 n y 
C8 H8 ANP sing 150 n n 
N7 C5 ANP sing 151 n y 
C5 C6 ANP sing 152 n y 
C5 C4 ANP doub 153 n y 
C6 N6 ANP sing 154 n n 
C6 N1 ANP doub 155 n y 
N6 HN61 ANP sing 156 n n 
N6 HN62 ANP sing 157 n n 
N1 C2 ANP sing 158 n y 
C2 N3 ANP doub 159 n y 
C2 H2 ANP sing 160 n n 
N3 C4 ANP sing 161 n y 
#
_atom_sites.entry_id                     9CSI 
_atom_sites.fract_transf_matrix[1][1]    0.014229 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012025 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002958 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ANP A 1 601 601 ANP ANP . 
C 3 MVC A 1 602 701 MVC MVC . 
D 4 MG A 1 603 1 MG MG . 
E 5 A1AZS A 1 604 1 A1AZS 871 . 
F 6 HOH A 1 701 43 HOH HOH . 
F 6 HOH A 2 702 50 HOH HOH . 
F 6 HOH A 3 703 3 HOH HOH . 
F 6 HOH A 4 704 25 HOH HOH . 
F 6 HOH A 5 705 12 HOH HOH . 
F 6 HOH A 6 706 28 HOH HOH . 
F 6 HOH A 7 707 34 HOH HOH . 
F 6 HOH A 8 708 56 HOH HOH . 
F 6 HOH A 9 709 36 HOH HOH . 
F 6 HOH A 10 710 6 HOH HOH . 
F 6 HOH A 11 711 55 HOH HOH . 
F 6 HOH A 12 712 20 HOH HOH . 
F 6 HOH A 13 713 18 HOH HOH . 
F 6 HOH A 14 714 31 HOH HOH . 
F 6 HOH A 15 715 26 HOH HOH . 
F 6 HOH A 16 716 58 HOH HOH . 
F 6 HOH A 17 717 14 HOH HOH . 
F 6 HOH A 18 718 54 HOH HOH . 
F 6 HOH A 19 719 65 HOH HOH . 
F 6 HOH A 20 720 53 HOH HOH . 
F 6 HOH A 21 721 24 HOH HOH . 
F 6 HOH A 22 722 51 HOH HOH . 
F 6 HOH A 23 723 2 HOH HOH . 
F 6 HOH A 24 724 57 HOH HOH . 
F 6 HOH A 25 725 5 HOH HOH . 
F 6 HOH A 26 726 10 HOH HOH . 
F 6 HOH A 27 727 32 HOH HOH . 
F 6 HOH A 28 728 42 HOH HOH . 
F 6 HOH A 29 729 45 HOH HOH . 
F 6 HOH A 30 730 21 HOH HOH . 
F 6 HOH A 31 731 46 HOH HOH . 
F 6 HOH A 32 732 9 HOH HOH . 
F 6 HOH A 33 733 22 HOH HOH . 
F 6 HOH A 34 734 39 HOH HOH . 
F 6 HOH A 35 735 44 HOH HOH . 
F 6 HOH A 36 736 11 HOH HOH . 
F 6 HOH A 37 737 33 HOH HOH . 
F 6 HOH A 38 738 15 HOH HOH . 
F 6 HOH A 39 739 59 HOH HOH . 
F 6 HOH A 40 740 35 HOH HOH . 
F 6 HOH A 41 741 64 HOH HOH . 
F 6 HOH A 42 742 62 HOH HOH . 
F 6 HOH A 43 743 63 HOH HOH . 
F 6 HOH A 44 744 27 HOH HOH . 
F 6 HOH A 45 745 61 HOH HOH . 
F 6 HOH A 46 746 30 HOH HOH . 
F 6 HOH A 47 747 7 HOH HOH . 
F 6 HOH A 48 748 19 HOH HOH . 
F 6 HOH A 49 749 1 HOH HOH . 
F 6 HOH A 50 750 29 HOH HOH . 
F 6 HOH A 51 751 52 HOH HOH . 
F 6 HOH A 52 752 23 HOH HOH . 
F 6 HOH A 53 753 8 HOH HOH . 
F 6 HOH A 54 754 4 HOH HOH . 
F 6 HOH A 55 755 49 HOH HOH . 
F 6 HOH A 56 756 38 HOH HOH . 
F 6 HOH A 57 757 13 HOH HOH . 
F 6 HOH A 58 758 40 HOH HOH . 
F 6 HOH A 59 759 47 HOH HOH . 
F 6 HOH A 60 760 17 HOH HOH . 
F 6 HOH A 61 761 41 HOH HOH . 
F 6 HOH A 62 762 37 HOH HOH . 
F 6 HOH A 63 763 16 HOH HOH . 
F 6 HOH A 64 764 60 HOH HOH . 
F 6 HOH A 65 765 48 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ANP . . . B 2 -4.251 -32.183 -97.355 1 60 ? PG ANP 601 A 1 
HETATM 2 O O1G ANP . . . B 2 -2.926 -32.037 -96.776 1 63.15 ? O1G ANP 601 A 1 
HETATM 3 O O2G ANP . . . B 2 -4.075 -32.469 -98.911 1 58.66 ? O2G ANP 601 A 1 
HETATM 4 O O3G ANP . . . B 2 -4.967 -33.376 -96.609 1 58.87 ? O3G ANP 601 A 1 
HETATM 5 P PB ANP . . . B 2 -6.666 -30.571 -96.783 1 52.84 ? PB ANP 601 A 1 
HETATM 6 O O1B ANP . . . B 2 -7.398 -30.118 -97.954 1 53.31 ? O1B ANP 601 A 1 
HETATM 7 O O2B ANP . . . B 2 -7.229 -31.932 -96.25 1 53.84 ? O2B ANP 601 A 1 
HETATM 8 N N3B ANP . . . B 2 -5.095 -30.807 -97.139 1 59.59 ? N3B ANP 601 A 1 
HETATM 9 P PA ANP . . . B 2 -7.208 -29.421 -94.13 1 53.8 ? PA ANP 601 A 1 
HETATM 10 O O1A ANP . . . B 2 -6.703 -30.537 -93.319 1 49.35 ? O1A ANP 601 A 1 
HETATM 11 O O2A ANP . . . B 2 -8.706 -29.521 -94.102 1 61.69 ? O2A ANP 601 A 1 
HETATM 12 O O3A ANP . . . B 2 -6.756 -29.504 -95.651 1 47.49 ? O3A ANP 601 A 1 
HETATM 13 O O5' ANP . . . B 2 -6.874 -27.957 -93.59 1 57.21 ? O5' ANP 601 A 1 
HETATM 14 C C5' ANP . . . B 2 -6.975 -26.735 -94.362 1 57.81 ? C5' ANP 601 A 1 
HETATM 15 C C4' ANP . . . B 2 -6.238 -25.677 -93.575 1 60.75 ? C4' ANP 601 A 1 
HETATM 16 O O4' ANP . . . B 2 -6.751 -25.648 -92.221 1 58.3 ? O4' ANP 601 A 1 
HETATM 17 C C3' ANP . . . B 2 -4.718 -25.868 -93.454 1 64.18 ? C3' ANP 601 A 1 
HETATM 18 O O3' ANP . . . B 2 -3.969 -24.674 -93.673 1 64.5 ? O3' ANP 601 A 1 
HETATM 19 C C2' ANP . . . B 2 -4.557 -26.473 -92.053 1 63.44 ? C2' ANP 601 A 1 
HETATM 20 O O2' ANP . . . B 2 -3.311 -26.269 -91.399 1 66.06 ? O2' ANP 601 A 1 
HETATM 21 C C1' ANP . . . B 2 -5.694 -25.801 -91.292 1 59.29 ? C1' ANP 601 A 1 
HETATM 22 N N9 ANP . . . B 2 -6.172 -26.584 -90.15 1 57.68 ? N9 ANP 601 A 1 
HETATM 23 C C8 ANP . . . B 2 -6.587 -27.889 -90.173 1 55.35 ? C8 ANP 601 A 1 
HETATM 24 N N7 ANP . . . B 2 -6.901 -28.373 -88.997 1 55.22 ? N7 ANP 601 A 1 
HETATM 25 C C5 ANP . . . B 2 -6.692 -27.307 -88.137 1 55.3 ? C5 ANP 601 A 1 
HETATM 26 C C6 ANP . . . B 2 -6.873 -27.163 -86.747 1 57.68 ? C6 ANP 601 A 1 
HETATM 27 N N6 ANP . . . B 2 -7.331 -28.138 -85.954 1 58.5 ? N6 ANP 601 A 1 
HETATM 28 N N1 ANP . . . B 2 -6.59 -25.962 -86.195 1 57.54 ? N1 ANP 601 A 1 
HETATM 29 C C2 ANP . . . B 2 -6.156 -24.977 -86.992 1 57.28 ? C2 ANP 601 A 1 
HETATM 30 N N3 ANP . . . B 2 -5.952 -24.993 -88.315 1 56.55 ? N3 ANP 601 A 1 
HETATM 31 C C4 ANP . . . B 2 -6.243 -26.195 -88.832 1 55.84 ? C4 ANP 601 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           31 
#