data_9CSN # _model_server_result.job_id TicbW4UPqeAkkrYBoYPD2w _model_server_result.datetime_utc '2025-09-01 05:01:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9csn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":403}' # _entry.id 9CSN # _exptl.entry_id 9CSN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.28 _cell.angle_gamma 90 _cell.entry_id 9CSN _cell.length_a 43.11 _cell.length_b 48.17 _cell.length_c 62.9 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9CSN _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,Q 1 1 B,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 K N N ? 5 L N N ? 5 M N N ? 5 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 24 A CYS 23 1_555 A SG CYS 82 A CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 38 A CYS 37 1_555 A SG CYS 92 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? disulf ? disulf3 A SG CYS 56 A CYS 55 1_555 A SG CYS 107 A CYS 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? disulf ? disulf4 A SG CYS 63 A CYS 62 1_555 A SG CYS 70 A CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? disulf ? disulf5 B SG CYS 24 B CYS 23 1_555 B SG CYS 82 B CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf6 B SG CYS 38 B CYS 37 1_555 B SG CYS 92 B CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? disulf ? disulf7 B SG CYS 56 B CYS 55 1_555 B SG CYS 107 B CYS 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf8 B SG CYS 63 B CYS 62 1_555 B SG CYS 70 B CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 128 n n C1 C2 EDO sing 129 n n C1 H11 EDO sing 130 n n C1 H12 EDO sing 131 n n O1 HO1 EDO sing 132 n n C2 O2 EDO sing 133 n n C2 H21 EDO sing 134 n n C2 H22 EDO sing 135 n n O2 HO2 EDO sing 136 n n # _atom_sites.entry_id 9CSN _atom_sites.fract_transf_matrix[1][1] 0.023196 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002962 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02076 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016027 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BO3 A 1 401 401 BO3 BO3 . D 2 BO3 A 1 402 501 BO3 BO3 . E 2 BO3 A 1 403 601 BO3 BO3 . F 3 AMP A 1 404 701 AMP AMP . G 4 GOL A 1 405 801 GOL GOL . H 5 EDO A 1 406 901 EDO EDO . I 2 BO3 A 1 407 1201 BO3 BO3 . J 2 BO3 A 1 408 1301 BO3 BO3 . K 5 EDO A 1 409 1401 EDO EDO . L 5 EDO B 1 401 401 EDO EDO . M 5 EDO B 1 402 501 EDO EDO . N 5 EDO B 1 403 601 EDO EDO . O 2 BO3 B 1 404 901 BO3 BO3 . P 4 GOL B 1 405 1001 GOL GOL . Q 6 HOH A 1 501 20 HOH HOH . Q 6 HOH A 2 502 27 HOH HOH . Q 6 HOH A 3 503 9 HOH HOH . Q 6 HOH A 4 504 3 HOH HOH . Q 6 HOH A 5 505 128 HOH HOH . Q 6 HOH A 6 506 10 HOH HOH . Q 6 HOH A 7 507 7 HOH HOH . Q 6 HOH A 8 508 22 HOH HOH . Q 6 HOH A 9 509 131 HOH HOH . Q 6 HOH A 10 510 17 HOH HOH . Q 6 HOH A 11 511 13 HOH HOH . Q 6 HOH A 12 512 1 HOH HOH . Q 6 HOH A 13 513 8 HOH HOH . Q 6 HOH A 14 514 12 HOH HOH . Q 6 HOH A 15 515 69 HOH HOH . Q 6 HOH A 16 516 50 HOH HOH . Q 6 HOH A 17 517 129 HOH HOH . Q 6 HOH A 18 518 42 HOH HOH . Q 6 HOH A 19 519 24 HOH HOH . Q 6 HOH A 20 520 30 HOH HOH . Q 6 HOH A 21 521 49 HOH HOH . Q 6 HOH A 22 522 87 HOH HOH . Q 6 HOH A 23 523 118 HOH HOH . Q 6 HOH A 24 524 21 HOH HOH . Q 6 HOH A 25 525 122 HOH HOH . Q 6 HOH A 26 526 79 HOH HOH . Q 6 HOH A 27 527 32 HOH HOH . Q 6 HOH A 28 528 123 HOH HOH . Q 6 HOH A 29 529 91 HOH HOH . Q 6 HOH A 30 530 29 HOH HOH . Q 6 HOH A 31 531 107 HOH HOH . Q 6 HOH A 32 532 93 HOH HOH . Q 6 HOH A 33 533 18 HOH HOH . Q 6 HOH A 34 534 96 HOH HOH . Q 6 HOH A 35 535 71 HOH HOH . Q 6 HOH A 36 536 85 HOH HOH . Q 6 HOH A 37 537 58 HOH HOH . Q 6 HOH A 38 538 108 HOH HOH . Q 6 HOH A 39 539 48 HOH HOH . Q 6 HOH A 40 540 92 HOH HOH . Q 6 HOH A 41 541 117 HOH HOH . Q 6 HOH A 42 542 115 HOH HOH . Q 6 HOH A 43 543 126 HOH HOH . Q 6 HOH A 44 544 67 HOH HOH . Q 6 HOH A 45 545 101 HOH HOH . Q 6 HOH A 46 546 127 HOH HOH . Q 6 HOH A 47 547 121 HOH HOH . R 6 HOH B 1 501 41 HOH HOH . R 6 HOH B 2 502 6 HOH HOH . R 6 HOH B 3 503 5 HOH HOH . R 6 HOH B 4 504 36 HOH HOH . R 6 HOH B 5 505 25 HOH HOH . R 6 HOH B 6 506 11 HOH HOH . R 6 HOH B 7 507 82 HOH HOH . R 6 HOH B 8 508 4 HOH HOH . R 6 HOH B 9 509 60 HOH HOH . R 6 HOH B 10 510 33 HOH HOH . R 6 HOH B 11 511 130 HOH HOH . R 6 HOH B 12 512 59 HOH HOH . R 6 HOH B 13 513 16 HOH HOH . R 6 HOH B 14 514 88 HOH HOH . R 6 HOH B 15 515 81 HOH HOH . R 6 HOH B 16 516 95 HOH HOH . R 6 HOH B 17 517 74 HOH HOH . R 6 HOH B 18 518 31 HOH HOH . R 6 HOH B 19 519 2 HOH HOH . R 6 HOH B 20 520 23 HOH HOH . R 6 HOH B 21 521 55 HOH HOH . R 6 HOH B 22 522 110 HOH HOH . R 6 HOH B 23 523 98 HOH HOH . R 6 HOH B 24 524 56 HOH HOH . R 6 HOH B 25 525 57 HOH HOH . R 6 HOH B 26 526 94 HOH HOH . R 6 HOH B 27 527 34 HOH HOH . R 6 HOH B 28 528 104 HOH HOH . R 6 HOH B 29 529 14 HOH HOH . R 6 HOH B 30 530 89 HOH HOH . R 6 HOH B 31 531 52 HOH HOH . R 6 HOH B 32 532 109 HOH HOH . R 6 HOH B 33 533 75 HOH HOH . R 6 HOH B 34 534 39 HOH HOH . R 6 HOH B 35 535 105 HOH HOH . R 6 HOH B 36 536 54 HOH HOH . R 6 HOH B 37 537 112 HOH HOH . R 6 HOH B 38 538 73 HOH HOH . R 6 HOH B 39 539 66 HOH HOH . R 6 HOH B 40 540 124 HOH HOH . R 6 HOH B 41 541 125 HOH HOH . R 6 HOH B 42 542 68 HOH HOH . R 6 HOH B 43 543 64 HOH HOH . R 6 HOH B 44 544 120 HOH HOH . R 6 HOH B 45 545 72 HOH HOH . R 6 HOH B 46 546 99 HOH HOH . R 6 HOH B 47 547 83 HOH HOH . R 6 HOH B 48 548 61 HOH HOH . R 6 HOH B 49 549 86 HOH HOH . R 6 HOH B 50 550 119 HOH HOH . R 6 HOH B 51 551 90 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . N 5 24.272 5.856 38.477 1 72.87 ? C1 EDO 403 B 1 HETATM 2 O O1 EDO . . . N 5 25.45 5.098 38.361 1 66.88 ? O1 EDO 403 B 1 HETATM 3 C C2 EDO . . . N 5 24.247 7.149 37.828 1 66.77 ? C2 EDO 403 B 1 HETATM 4 O O2 EDO . . . N 5 23.07 7.239 37.101 1 53.77 ? O2 EDO 403 B 1 HETATM 5 H H11 EDO . . . N 5 24.067 6.005 39.539 1 87.49 ? H11 EDO 403 B 1 HETATM 6 H H12 EDO . . . N 5 23.446 5.263 38.079 1 87.49 ? H12 EDO 403 B 1 HETATM 7 H HO1 EDO . . . N 5 25.343 4.261 38.834 1 80.3 ? HO1 EDO 403 B 1 HETATM 8 H H21 EDO . . . N 5 25.108 7.253 37.164 1 80.17 ? H21 EDO 403 B 1 HETATM 9 H H22 EDO . . . N 5 24.287 7.944 38.575 1 80.17 ? H22 EDO 403 B 1 HETATM 10 H HO2 EDO . . . N 5 23.03 8.097 36.657 1 64.57 ? HO2 EDO 403 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 401 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #