data_9CSW # _model_server_result.job_id N7yUeXSPgWFeXlntL4xGPw _model_server_result.datetime_utc '2024-12-17 10:50:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9csw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 9CSW # _exptl.entry_id 9CSW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9CSW _cell.length_a 57.77 _cell.length_b 57.77 _cell.length_c 184.25 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9CSW _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall 'I 4bw 2bw' _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 57.77 57.77 0 3 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 57.77 57.77 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 87 A HIS 87 1_555 C CU CU . A CU 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc2 B N3 QG7 . A QG7 201 1_555 E CU CU . A CU 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc3 B N4 QG7 . A QG7 201 1_555 E CU CU . A CU 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? metalc ? metalc4 B N5 QG7 . A QG7 201 1_555 E CU CU . A CU 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? metalc ? metalc5 D OXT ACY . A ACY 203 1_555 E CU CU . A CU 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc6 E CU CU . A CU 204 1_555 F O HOH . A HOH 381 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACY doub 1 n n C OXT ACY sing 2 n n C CH3 ACY sing 3 n n OXT HXT ACY sing 4 n n CH3 H1 ACY sing 5 n n CH3 H2 ACY sing 6 n n CH3 H3 ACY sing 7 n n # _atom_sites.entry_id 9CSW _atom_sites.fract_transf_matrix[1][1] 0.01731 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01731 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005427 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QG7 A 1 201 201 QG7 UYE . C 3 CU A 1 202 2 CU CU . D 4 ACY A 1 203 3 ACY ACT . E 3 CU A 1 204 1 CU CU . F 5 HOH A 1 301 103 HOH HOH . F 5 HOH A 2 302 44 HOH HOH . F 5 HOH A 3 303 35 HOH HOH . F 5 HOH A 4 304 70 HOH HOH . F 5 HOH A 5 305 4 HOH HOH . F 5 HOH A 6 306 21 HOH HOH . F 5 HOH A 7 307 40 HOH HOH . F 5 HOH A 8 308 77 HOH HOH . F 5 HOH A 9 309 72 HOH HOH . F 5 HOH A 10 310 101 HOH HOH . F 5 HOH A 11 311 99 HOH HOH . F 5 HOH A 12 312 19 HOH HOH . F 5 HOH A 13 313 15 HOH HOH . F 5 HOH A 14 314 25 HOH HOH . F 5 HOH A 15 315 13 HOH HOH . F 5 HOH A 16 316 67 HOH HOH . F 5 HOH A 17 317 2 HOH HOH . F 5 HOH A 18 318 6 HOH HOH . F 5 HOH A 19 319 62 HOH HOH . F 5 HOH A 20 320 107 HOH HOH . F 5 HOH A 21 321 60 HOH HOH . F 5 HOH A 22 322 26 HOH HOH . F 5 HOH A 23 323 28 HOH HOH . F 5 HOH A 24 324 33 HOH HOH . F 5 HOH A 25 325 39 HOH HOH . F 5 HOH A 26 326 23 HOH HOH . F 5 HOH A 27 327 66 HOH HOH . F 5 HOH A 28 328 58 HOH HOH . F 5 HOH A 29 329 7 HOH HOH . F 5 HOH A 30 330 75 HOH HOH . F 5 HOH A 31 331 100 HOH HOH . F 5 HOH A 32 332 48 HOH HOH . F 5 HOH A 33 333 11 HOH HOH . F 5 HOH A 34 334 3 HOH HOH . F 5 HOH A 35 335 8 HOH HOH . F 5 HOH A 36 336 76 HOH HOH . F 5 HOH A 37 337 46 HOH HOH . F 5 HOH A 38 338 9 HOH HOH . F 5 HOH A 39 339 57 HOH HOH . F 5 HOH A 40 340 61 HOH HOH . F 5 HOH A 41 341 82 HOH HOH . F 5 HOH A 42 342 18 HOH HOH . F 5 HOH A 43 343 49 HOH HOH . F 5 HOH A 44 344 17 HOH HOH . F 5 HOH A 45 345 32 HOH HOH . F 5 HOH A 46 346 78 HOH HOH . F 5 HOH A 47 347 54 HOH HOH . F 5 HOH A 48 348 97 HOH HOH . F 5 HOH A 49 349 30 HOH HOH . F 5 HOH A 50 350 43 HOH HOH . F 5 HOH A 51 351 5 HOH HOH . F 5 HOH A 52 352 22 HOH HOH . F 5 HOH A 53 353 50 HOH HOH . F 5 HOH A 54 354 56 HOH HOH . F 5 HOH A 55 355 85 HOH HOH . F 5 HOH A 56 356 83 HOH HOH . F 5 HOH A 57 357 20 HOH HOH . F 5 HOH A 58 358 88 HOH HOH . F 5 HOH A 59 359 16 HOH HOH . F 5 HOH A 60 360 31 HOH HOH . F 5 HOH A 61 361 27 HOH HOH . F 5 HOH A 62 362 29 HOH HOH . F 5 HOH A 63 363 59 HOH HOH . F 5 HOH A 64 364 24 HOH HOH . F 5 HOH A 65 365 14 HOH HOH . F 5 HOH A 66 366 92 HOH HOH . F 5 HOH A 67 367 91 HOH HOH . F 5 HOH A 68 368 38 HOH HOH . F 5 HOH A 69 369 69 HOH HOH . F 5 HOH A 70 370 41 HOH HOH . F 5 HOH A 71 371 10 HOH HOH . F 5 HOH A 72 372 51 HOH HOH . F 5 HOH A 73 373 53 HOH HOH . F 5 HOH A 74 374 73 HOH HOH . F 5 HOH A 75 375 45 HOH HOH . F 5 HOH A 76 376 68 HOH HOH . F 5 HOH A 77 377 104 HOH HOH . F 5 HOH A 78 378 79 HOH HOH . F 5 HOH A 79 379 55 HOH HOH . F 5 HOH A 80 380 80 HOH HOH . F 5 HOH A 81 381 1 HOH HOH . F 5 HOH A 82 382 52 HOH HOH . F 5 HOH A 83 383 42 HOH HOH . F 5 HOH A 84 384 34 HOH HOH . F 5 HOH A 85 385 71 HOH HOH . F 5 HOH A 86 386 90 HOH HOH . F 5 HOH A 87 387 102 HOH HOH . F 5 HOH A 88 388 65 HOH HOH . F 5 HOH A 89 389 47 HOH HOH . F 5 HOH A 90 390 74 HOH HOH . F 5 HOH A 91 391 86 HOH HOH . F 5 HOH A 92 392 98 HOH HOH . F 5 HOH A 93 393 105 HOH HOH . F 5 HOH A 94 394 84 HOH HOH . F 5 HOH A 95 395 81 HOH HOH . F 5 HOH A 96 396 94 HOH HOH . F 5 HOH A 97 397 106 HOH HOH . F 5 HOH A 98 398 108 HOH HOH . F 5 HOH A 99 399 64 HOH HOH . F 5 HOH A 100 400 95 HOH HOH . F 5 HOH A 101 401 63 HOH HOH . F 5 HOH A 102 402 93 HOH HOH . F 5 HOH A 103 403 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . D 4 22.933 24.83 -19.635 1 25.51 ? C ACY 203 A 1 HETATM 2 O O ACY . . . D 4 22.386 24.109 -18.75 1 30.18 ? O ACY 203 A 1 HETATM 3 O OXT ACY . . . D 4 23.736 25.788 -19.495 1 29.6 ? OXT ACY 203 A 1 HETATM 4 C CH3 ACY . . . D 4 22.571 24.511 -21.128 1 26.7 ? CH3 ACY 203 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #