data_9CUH # _model_server_result.job_id 382ezUoaTAlIMZDrPk-ZTw _model_server_result.datetime_utc '2024-11-18 10:20:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9cuh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"DA","auth_seq_id":801}' # _entry.id 9CUH # _exptl.entry_id 9CUH _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 486.726 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHOLESTEROL HEMISUCCINATE' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9CUH _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9CUH _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 O N N ? 2 R N N ? 2 T N N ? 2 U N N ? 2 DA N N ? 2 FA N N ? 2 GA N N ? 2 RA N N ? 2 TA N N ? 2 UA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 582 A ASP 542 1_555 Q CA CA . A CA 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc2 A OD2 ASP 582 A ASP 542 1_555 Q CA CA . A CA 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? metalc ? metalc3 Q CA CA . A CA 813 1_555 B OD1 ASP 582 B ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc4 Q CA CA . A CA 813 1_555 B OD2 ASP 582 B ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? metalc ? metalc5 Q CA CA . A CA 813 1_555 C OD1 ASP 582 C ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc6 Q CA CA . A CA 813 1_555 C OD2 ASP 582 C ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc7 Q CA CA . A CA 813 1_555 D OD1 ASP 582 D ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc8 Q CA CA . A CA 813 1_555 D OD2 ASP 582 D ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? # _chem_comp.formula 'C31 H50 O4' _chem_comp.formula_weight 486.726 _chem_comp.id Y01 _chem_comp.mon_nstd_flag . _chem_comp.name 'CHOLESTEROL HEMISUCCINATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CBA Y01 sing 647 n n CBA CAB Y01 sing 648 n n CBA CAN Y01 sing 649 n n CAN CAJ Y01 sing 650 n n CAJ CAO Y01 sing 651 n n CAO CBB Y01 sing 652 n n CBB CAC Y01 sing 653 n n CBB CBE Y01 sing 654 n n CBE CAP Y01 sing 655 n n CBE CBI Y01 sing 656 n n CAP CAQ Y01 sing 657 n n CAQ CBG Y01 sing 658 n n CBG CBI Y01 sing 659 n n CBG CBD Y01 sing 660 n n CBI CAE Y01 sing 661 n n CBI CAU Y01 sing 662 n n CAU CAS Y01 sing 663 n n CAS CBF Y01 sing 664 n n CBF CBD Y01 sing 665 n n CBF CBH Y01 sing 666 n n CBD CAK Y01 sing 667 n n CAK CAI Y01 sing 668 n n CAI CAZ Y01 doub 669 n n CAZ CAV Y01 sing 670 n n CAZ CBH Y01 sing 671 n n CAV CBC Y01 sing 672 n n CBH CAD Y01 sing 673 n n CBH CAT Y01 sing 674 n n CAT CAR Y01 sing 675 n n CAR CBC Y01 sing 676 n n CBC OAW Y01 sing 677 n n OAW CAY Y01 sing 678 n n CAY OAG Y01 doub 679 n n CAY CAM Y01 sing 680 n n CAM CAL Y01 sing 681 n n CAL CAX Y01 sing 682 n n CAX OAH Y01 sing 683 n n CAX OAF Y01 doub 684 n n CAA HAA1 Y01 sing 685 n n CAA HAA2 Y01 sing 686 n n CAA HAA3 Y01 sing 687 n n CBA HBA Y01 sing 688 n n CAB HAB1 Y01 sing 689 n n CAB HAB2 Y01 sing 690 n n CAB HAB3 Y01 sing 691 n n CAN HAN1 Y01 sing 692 n n CAN HAN2 Y01 sing 693 n n CAJ HAJ1 Y01 sing 694 n n CAJ HAJ2 Y01 sing 695 n n CAO HAO1 Y01 sing 696 n n CAO HAO2 Y01 sing 697 n n CBB HBB Y01 sing 698 n n CAC HAC1 Y01 sing 699 n n CAC HAC2 Y01 sing 700 n n CAC HAC3 Y01 sing 701 n n CBE HBE Y01 sing 702 n n CAP HAP1 Y01 sing 703 n n CAP HAP2 Y01 sing 704 n n CAQ HAQ1 Y01 sing 705 n n CAQ HAQ2 Y01 sing 706 n n CBG HBG Y01 sing 707 n n CBD HBD Y01 sing 708 n n CAE HAE1 Y01 sing 709 n n CAE HAE2 Y01 sing 710 n n CAE HAE3 Y01 sing 711 n n CAU HAU1 Y01 sing 712 n n CAU HAU2 Y01 sing 713 n n CAS HAS1 Y01 sing 714 n n CAS HAS2 Y01 sing 715 n n CBF HBF Y01 sing 716 n n CAK HAK1 Y01 sing 717 n n CAK HAK2 Y01 sing 718 n n CAI HAI Y01 sing 719 n n CAV HAV1 Y01 sing 720 n n CAV HAV2 Y01 sing 721 n n CBC HBC Y01 sing 722 n n CAD HAD1 Y01 sing 723 n n CAD HAD2 Y01 sing 724 n n CAD HAD3 Y01 sing 725 n n CAT HAT1 Y01 sing 726 n n CAT HAT2 Y01 sing 727 n n CAR HAR1 Y01 sing 728 n n CAR HAR2 Y01 sing 729 n n CAM HAM1 Y01 sing 730 n n CAM HAM2 Y01 sing 731 n n CAL HAL1 Y01 sing 732 n n CAL HAL2 Y01 sing 733 n n OAH HAH Y01 sing 734 n n # _atom_sites.entry_id 9CUH _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 Y01 A 1 801 801 Y01 Y01 . F 2 Y01 A 1 802 802 Y01 Y01 . G 3 PCW A 1 803 804 PCW PCW . H 4 POV A 1 804 806 POV POV . I 4 POV A 1 805 807 POV POV . J 4 POV A 1 806 809 POV POV . K 4 POV A 1 807 811 POV POV . L 4 POV A 1 808 812 POV POV . M 4 POV A 1 809 808 POV POV . N 4 POV A 1 810 810 POV POV . O 2 Y01 A 1 811 803 Y01 Y01 . P 4 POV A 1 812 805 POV POV . Q 5 CA A 1 813 1 CA CA . R 2 Y01 B 1 801 803 Y01 Y01 . S 4 POV B 1 802 805 POV POV . T 2 Y01 B 1 803 801 Y01 Y01 . U 2 Y01 B 1 804 802 Y01 Y01 . V 3 PCW B 1 805 804 PCW PCW . W 4 POV B 1 806 806 POV POV . X 4 POV B 1 807 807 POV POV . Y 4 POV B 1 808 809 POV POV . Z 4 POV B 1 809 811 POV POV . AA 4 POV B 1 810 812 POV POV . BA 4 POV B 1 811 808 POV POV . CA 4 POV B 1 812 810 POV POV . DA 2 Y01 C 1 801 803 Y01 Y01 . EA 4 POV C 1 802 805 POV POV . FA 2 Y01 C 1 803 801 Y01 Y01 . GA 2 Y01 C 1 804 802 Y01 Y01 . HA 3 PCW C 1 805 804 PCW PCW . IA 4 POV C 1 806 806 POV POV . JA 4 POV C 1 807 807 POV POV . KA 4 POV C 1 808 809 POV POV . LA 4 POV C 1 809 811 POV POV . MA 4 POV C 1 810 812 POV POV . NA 4 POV C 1 811 808 POV POV . OA 4 POV C 1 812 810 POV POV . PA 4 POV D 1 801 808 POV POV . QA 4 POV D 1 802 810 POV POV . RA 2 Y01 D 1 803 803 Y01 Y01 . SA 4 POV D 1 804 805 POV POV . TA 2 Y01 D 1 805 801 Y01 Y01 . UA 2 Y01 D 1 806 802 Y01 Y01 . VA 3 PCW D 1 807 804 PCW PCW . WA 4 POV D 1 808 806 POV POV . XA 4 POV D 1 809 807 POV POV . YA 4 POV D 1 810 809 POV POV . ZA 4 POV D 1 811 811 POV POV . AB 4 POV D 1 812 812 POV POV . BB 6 HOH A 1 901 920 HOH HOH . BB 6 HOH A 2 902 922 HOH HOH . BB 6 HOH A 3 903 924 HOH HOH . BB 6 HOH A 4 904 923 HOH HOH . BB 6 HOH A 5 905 921 HOH HOH . BB 6 HOH A 6 906 912 HOH HOH . BB 6 HOH A 7 907 934 HOH HOH . BB 6 HOH A 8 908 909 HOH HOH . BB 6 HOH A 9 909 935 HOH HOH . BB 6 HOH A 10 910 928 HOH HOH . BB 6 HOH A 11 911 936 HOH HOH . BB 6 HOH A 12 912 903 HOH HOH . BB 6 HOH A 13 913 904 HOH HOH . BB 6 HOH A 14 914 901 HOH HOH . BB 6 HOH A 15 915 929 HOH HOH . BB 6 HOH A 16 916 926 HOH HOH . BB 6 HOH A 17 917 927 HOH HOH . BB 6 HOH A 18 918 925 HOH HOH . CB 6 HOH B 1 901 924 HOH HOH . CB 6 HOH B 2 902 920 HOH HOH . CB 6 HOH B 3 903 922 HOH HOH . CB 6 HOH B 4 904 912 HOH HOH . CB 6 HOH B 5 905 934 HOH HOH . CB 6 HOH B 6 906 923 HOH HOH . CB 6 HOH B 7 907 921 HOH HOH . CB 6 HOH B 8 908 935 HOH HOH . CB 6 HOH B 9 909 909 HOH HOH . CB 6 HOH B 10 910 928 HOH HOH . CB 6 HOH B 11 911 903 HOH HOH . CB 6 HOH B 12 912 936 HOH HOH . CB 6 HOH B 13 913 904 HOH HOH . CB 6 HOH B 14 914 901 HOH HOH . CB 6 HOH B 15 915 929 HOH HOH . CB 6 HOH B 16 916 926 HOH HOH . CB 6 HOH B 17 917 927 HOH HOH . CB 6 HOH B 18 918 925 HOH HOH . DB 6 HOH C 1 901 924 HOH HOH . DB 6 HOH C 2 902 920 HOH HOH . DB 6 HOH C 3 903 922 HOH HOH . DB 6 HOH C 4 904 912 HOH HOH . DB 6 HOH C 5 905 934 HOH HOH . DB 6 HOH C 6 906 923 HOH HOH . DB 6 HOH C 7 907 921 HOH HOH . DB 6 HOH C 8 908 935 HOH HOH . DB 6 HOH C 9 909 936 HOH HOH . DB 6 HOH C 10 910 928 HOH HOH . DB 6 HOH C 11 911 903 HOH HOH . DB 6 HOH C 12 912 909 HOH HOH . DB 6 HOH C 13 913 904 HOH HOH . DB 6 HOH C 14 914 901 HOH HOH . DB 6 HOH C 15 915 926 HOH HOH . DB 6 HOH C 16 916 929 HOH HOH . DB 6 HOH C 17 917 927 HOH HOH . DB 6 HOH C 18 918 925 HOH HOH . EB 6 HOH D 1 901 924 HOH HOH . EB 6 HOH D 2 902 920 HOH HOH . EB 6 HOH D 3 903 922 HOH HOH . EB 6 HOH D 4 904 912 HOH HOH . EB 6 HOH D 5 905 934 HOH HOH . EB 6 HOH D 6 906 923 HOH HOH . EB 6 HOH D 7 907 921 HOH HOH . EB 6 HOH D 8 908 935 HOH HOH . EB 6 HOH D 9 909 928 HOH HOH . EB 6 HOH D 10 910 936 HOH HOH . EB 6 HOH D 11 911 903 HOH HOH . EB 6 HOH D 12 912 909 HOH HOH . EB 6 HOH D 13 913 904 HOH HOH . EB 6 HOH D 14 914 901 HOH HOH . EB 6 HOH D 15 915 926 HOH HOH . EB 6 HOH D 16 916 929 HOH HOH . EB 6 HOH D 17 917 927 HOH HOH . EB 6 HOH D 18 918 925 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA Y01 . . . DA 2 132.494 118.992 119.688 1 48.86 ? CAA Y01 801 C 1 HETATM 2 C CBA Y01 . . . DA 2 131.53 120.162 119.652 1 48.86 ? CBA Y01 801 C 1 HETATM 3 C CAB Y01 . . . DA 2 132.289 121.469 119.539 1 48.86 ? CAB Y01 801 C 1 HETATM 4 C CAN Y01 . . . DA 2 130.501 119.997 118.538 1 48.86 ? CAN Y01 801 C 1 HETATM 5 C CAJ Y01 . . . DA 2 130.402 118.62 117.948 1 48.86 ? CAJ Y01 801 C 1 HETATM 6 C CAO Y01 . . . DA 2 130.288 118.645 116.456 1 48.86 ? CAO Y01 801 C 1 HETATM 7 C CBB Y01 . . . DA 2 131.338 117.829 115.695 1 48.86 ? CBB Y01 801 C 1 HETATM 8 C CAC Y01 . . . DA 2 131.865 116.7 116.567 1 48.86 ? CAC Y01 801 C 1 HETATM 9 C CBE Y01 . . . DA 2 130.71 117.331 114.389 1 48.86 ? CBE Y01 801 C 1 HETATM 10 C CAP Y01 . . . DA 2 129.723 118.395 113.843 1 48.86 ? CAP Y01 801 C 1 HETATM 11 C CAQ Y01 . . . DA 2 130 118.535 112.345 1 48.86 ? CAQ Y01 801 C 1 HETATM 12 C CBG Y01 . . . DA 2 130.647 117.205 112.011 1 48.86 ? CBG Y01 801 C 1 HETATM 13 C CBI Y01 . . . DA 2 131.611 116.947 113.179 1 48.86 ? CBI Y01 801 C 1 HETATM 14 C CAE Y01 . . . DA 2 132.856 117.836 113.144 1 48.86 ? CAE Y01 801 C 1 HETATM 15 C CAU Y01 . . . DA 2 132.022 115.481 113.049 1 48.86 ? CAU Y01 801 C 1 HETATM 16 C CAS Y01 . . . DA 2 132.654 115.197 111.682 1 48.86 ? CAS Y01 801 C 1 HETATM 17 C CBF Y01 . . . DA 2 131.764 115.583 110.494 1 48.86 ? CBF Y01 801 C 1 HETATM 18 C CBD Y01 . . . DA 2 131.243 117.019 110.633 1 48.86 ? CBD Y01 801 C 1 HETATM 19 C CAK Y01 . . . DA 2 130.169 117.272 109.592 1 48.86 ? CAK Y01 801 C 1 HETATM 20 C CAI Y01 . . . DA 2 130.531 116.69 108.271 1 48.86 ? CAI Y01 801 C 1 HETATM 21 C CAZ Y01 . . . DA 2 131.634 116.011 108.032 1 48.86 ? CAZ Y01 801 C 1 HETATM 22 C CAV Y01 . . . DA 2 132.089 115.742 106.621 1 48.86 ? CAV Y01 801 C 1 HETATM 23 C CBH Y01 . . . DA 2 132.46 115.36 109.126 1 48.86 ? CBH Y01 801 C 1 HETATM 24 C CAD Y01 . . . DA 2 133.867 115.965 109.123 1 48.86 ? CAD Y01 801 C 1 HETATM 25 C CAT Y01 . . . DA 2 132.545 113.857 108.792 1 48.86 ? CAT Y01 801 C 1 HETATM 26 C CAR Y01 . . . DA 2 132.921 113.57 107.335 1 48.86 ? CAR Y01 801 C 1 HETATM 27 C CBC Y01 . . . DA 2 132.006 114.266 106.364 1 48.86 ? CBC Y01 801 C 1 HETATM 28 O OAW Y01 . . . DA 2 132.407 113.931 104.997 1 48.86 ? OAW Y01 801 C 1 HETATM 29 C CAY Y01 . . . DA 2 132.68 114.868 104.078 1 48.86 ? CAY Y01 801 C 1 HETATM 30 O OAG Y01 . . . DA 2 131.936 115.747 103.746 1 48.86 ? OAG Y01 801 C 1 HETATM 31 C CAM Y01 . . . DA 2 134.008 114.622 103.424 1 48.86 ? CAM Y01 801 C 1 HETATM 32 C CAL Y01 . . . DA 2 134.298 115.464 102.198 1 48.86 ? CAL Y01 801 C 1 HETATM 33 C CAX Y01 . . . DA 2 134.274 114.723 100.872 1 48.86 ? CAX Y01 801 C 1 HETATM 34 O OAH Y01 . . . DA 2 134.642 115.325 99.848 1 48.86 ? OAH Y01 801 C 1 HETATM 35 O OAF Y01 . . . DA 2 133.883 113.545 100.866 1 48.86 ? OAF Y01 801 C 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 53 _model_server_stats.query_time_ms 489 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 35 #