data_9CUI # _model_server_result.job_id nrmVf0jX2XyKkbuK6zFRPA _model_server_result.datetime_utc '2024-11-27 02:25:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9cui # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"JB","auth_seq_id":813}' # _entry.id 9CUI # _exptl.entry_id 9CUI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 787.121 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 43 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9CUI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 9CUI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N ? 5 J N N ? 5 K N N ? 5 L N N ? 5 M N N ? 5 N N N ? 5 O N N ? 5 P N N ? 5 Q N N ? 5 R N N ? 5 T N N ? 5 X N N ? 5 BA N N ? 5 CA N N ? 5 DA N N ? 5 EA N N ? 5 FA N N ? 5 GA N N ? 5 HA N N ? 5 IA N N ? 5 KA N N ? 5 LA N N ? 5 PA N N ? 5 QA N N ? 5 RA N N ? 5 SA N N ? 5 TA N N ? 5 UA N N ? 5 VA N N ? 5 WA N N ? 5 XA N N ? 5 YA N N ? 5 ZA N N ? 5 AB N N ? 5 BB N N ? 5 EB N N ? 5 FB N N ? 5 GB N N ? 5 HB N N ? 5 IB N N ? 5 JB N N ? 5 KB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 582 A ASP 542 1_555 U CA CA . A CA 816 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.55 ? metalc ? metalc2 U CA CA . A CA 816 1_555 B OD1 ASP 582 B ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? metalc ? metalc3 U CA CA . A CA 816 1_555 C OD1 ASP 582 C ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc4 U CA CA . A CA 816 1_555 D OD1 ASP 582 D ASP 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc5 E OD2 ASP 23 E ASP 22 1_555 LB CA CA . E CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? metalc ? metalc6 E O THR 27 E THR 26 1_555 LB CA CA . E CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc7 E OE1 GLU 32 E GLU 31 1_555 LB CA CA . E CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc8 E OD1 ASP 59 E ASP 58 1_555 MB CA CA . E CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.012 ? metalc ? metalc9 E OD2 ASP 59 E ASP 58 1_555 MB CA CA . E CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc10 E OD1 ASN 61 E ASN 60 1_555 MB CA CA . E CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.883 ? metalc ? metalc11 E O THR 63 E THR 62 1_555 MB CA CA . E CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc12 E OE1 GLU 68 E GLU 67 1_555 MB CA CA . E CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc13 E OD1 ASP 94 E ASP 93 1_555 NB CA CA . E CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.964 ? metalc ? metalc14 E OD1 ASP 96 E ASP 95 1_555 NB CA CA . E CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc15 E OD1 ASN 98 E ASN 97 1_555 NB CA CA . E CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc16 E O TYR 100 E TYR 99 1_555 NB CA CA . E CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc17 E OE1 GLU 105 E GLU 104 1_555 NB CA CA . E CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc18 E OE2 GLU 105 E GLU 104 1_555 NB CA CA . E CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? metalc ? metalc19 E OD1 ASP 130 E ASP 129 1_555 OB CA CA . E CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.885 ? metalc ? metalc20 E OD1 ASP 132 E ASP 131 1_555 OB CA CA . E CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.603 ? metalc ? metalc21 E OD1 ASP 134 E ASP 133 1_555 OB CA CA . E CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc22 E OD2 ASP 134 E ASP 133 1_555 OB CA CA . E CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.113 ? metalc ? metalc23 E O GLN 136 E GLN 135 1_555 OB CA CA . E CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc24 E OD1 ASN 138 E ASN 137 1_555 OB CA CA . E CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc25 E OE1 GLU 141 E GLU 140 1_555 OB CA CA . E CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.672 ? metalc ? metalc26 E OE2 GLU 141 E GLU 140 1_555 OB CA CA . E CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? # _chem_comp.formula 'C44 H85 N O8 P 1' _chem_comp.formula_weight 787.121 _chem_comp.id PCW _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (Z,Z)-4-HYDROXY-N,N,N-TRIMETHYL-10-OXO-7-[(1-OXO-9-OCTADECENYL)OXY]-3,5,9-TRIOXA-4-PHOSPHAHEPTACOS-18-EN-1-AMINIUM-4-OXIDE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PCW sing 312 n n C1 O3P PCW sing 313 n n C1 H11 PCW sing 314 n n C1 H12 PCW sing 315 n n C2 C3 PCW sing 316 n n C2 O2 PCW sing 317 n n C2 H2 PCW sing 318 n n C3 O3 PCW sing 319 n n C3 H31 PCW sing 320 n n C3 H32 PCW sing 321 n n C4 C5 PCW sing 322 n n C4 O4P PCW sing 323 n n C4 H41 PCW sing 324 n n C4 H42 PCW sing 325 n n C5 N PCW sing 326 n n C5 H51 PCW sing 327 n n C5 H52 PCW sing 328 n n C6 N PCW sing 329 n n C6 H61 PCW sing 330 n n C6 H62 PCW sing 331 n n C6 H63 PCW sing 332 n n C7 N PCW sing 333 n n C7 H71 PCW sing 334 n n C7 H72 PCW sing 335 n n C7 H73 PCW sing 336 n n C8 N PCW sing 337 n n C8 H81 PCW sing 338 n n C8 H82 PCW sing 339 n n C8 H83 PCW sing 340 n n C11 C12 PCW sing 341 n n C11 O3 PCW sing 342 n n C11 O11 PCW doub 343 n n C12 C13 PCW sing 344 n n C12 H121 PCW sing 345 n n C12 H122 PCW sing 346 n n C13 C14 PCW sing 347 n n C13 H131 PCW sing 348 n n C13 H132 PCW sing 349 n n C14 C15 PCW sing 350 n n C14 H141 PCW sing 351 n n C14 H142 PCW sing 352 n n C15 C16 PCW sing 353 n n C15 H151 PCW sing 354 n n C15 H152 PCW sing 355 n n C16 C17 PCW sing 356 n n C16 H161 PCW sing 357 n n C16 H162 PCW sing 358 n n C17 C18 PCW sing 359 n n C17 H171 PCW sing 360 n n C17 H172 PCW sing 361 n n C18 C19 PCW sing 362 n n C18 H181 PCW sing 363 n n C18 H182 PCW sing 364 n n C19 C20 PCW doub 365 z n C19 H19 PCW sing 366 n n C20 C21 PCW sing 367 n n C20 H20 PCW sing 368 n n C21 C22 PCW sing 369 n n C21 H211 PCW sing 370 n n C21 H212 PCW sing 371 n n C22 C23 PCW sing 372 n n C22 H221 PCW sing 373 n n C22 H222 PCW sing 374 n n C23 C24 PCW sing 375 n n C23 H231 PCW sing 376 n n C23 H232 PCW sing 377 n n C24 C25 PCW sing 378 n n C24 H241 PCW sing 379 n n C24 H242 PCW sing 380 n n C25 C26 PCW sing 381 n n C25 H251 PCW sing 382 n n C25 H252 PCW sing 383 n n C26 C27 PCW sing 384 n n C26 H261 PCW sing 385 n n C26 H262 PCW sing 386 n n C27 C28 PCW sing 387 n n C27 H271 PCW sing 388 n n C27 H272 PCW sing 389 n n C28 H281 PCW sing 390 n n C28 H282 PCW sing 391 n n C28 H283 PCW sing 392 n n C31 C32 PCW sing 393 n n C31 O2 PCW sing 394 n n C31 O31 PCW doub 395 n n C32 C33 PCW sing 396 n n C32 H321 PCW sing 397 n n C32 H322 PCW sing 398 n n C33 C34 PCW sing 399 n n C33 H331 PCW sing 400 n n C33 H332 PCW sing 401 n n C34 C35 PCW sing 402 n n C34 H341 PCW sing 403 n n C34 H342 PCW sing 404 n n C35 C36 PCW sing 405 n n C35 H351 PCW sing 406 n n C35 H352 PCW sing 407 n n C36 C37 PCW sing 408 n n C36 H361 PCW sing 409 n n C36 H362 PCW sing 410 n n C37 C38 PCW sing 411 n n C37 H371 PCW sing 412 n n C37 H372 PCW sing 413 n n C38 C39 PCW sing 414 n n C38 H381 PCW sing 415 n n C38 H382 PCW sing 416 n n C39 C40 PCW doub 417 z n C39 H39 PCW sing 418 n n C40 C41 PCW sing 419 n n C40 H40 PCW sing 420 n n C41 C42 PCW sing 421 n n C41 H411 PCW sing 422 n n C41 H412 PCW sing 423 n n C42 C43 PCW sing 424 n n C42 H421 PCW sing 425 n n C42 H422 PCW sing 426 n n C43 C44 PCW sing 427 n n C43 H431 PCW sing 428 n n C43 H432 PCW sing 429 n n C44 C45 PCW sing 430 n n C44 H441 PCW sing 431 n n C44 H442 PCW sing 432 n n C45 C46 PCW sing 433 n n C45 H451 PCW sing 434 n n C45 H452 PCW sing 435 n n C46 C47 PCW sing 436 n n C46 H461 PCW sing 437 n n C46 H462 PCW sing 438 n n C47 C48 PCW sing 439 n n C47 H471 PCW sing 440 n n C47 H472 PCW sing 441 n n C48 H481 PCW sing 442 n n C48 H482 PCW sing 443 n n C48 H483 PCW sing 444 n n O1P P PCW sing 445 n n O1P H1P PCW sing 446 n n O2P P PCW doub 447 n n O3P P PCW sing 448 n n O4P P PCW sing 449 n n # _atom_sites.entry_id 9CUI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 Y01 A 1 801 801 Y01 Y01 . G 4 CLR A 1 802 802 CLR CLR . H 5 PCW A 1 803 804 PCW PCW . I 5 PCW A 1 804 805 PCW PCW . J 5 PCW A 1 805 808 PCW PCW . K 5 PCW A 1 806 809 PCW PCW . L 5 PCW A 1 807 810 PCW PCW . M 5 PCW A 1 808 813 PCW PCW . N 5 PCW A 1 809 815 PCW PCW . O 5 PCW A 1 810 806 PCW PCW . P 5 PCW A 1 811 811 PCW PCW . Q 5 PCW A 1 812 812 PCW PCW . R 5 PCW A 1 813 813 PCW PCW . S 3 Y01 A 1 814 803 Y01 Y01 . T 5 PCW A 1 815 807 PCW PCW . U 6 CA A 1 816 901 CA CA . V 6 CA A 1 817 902 CA CA . W 3 Y01 B 1 801 803 Y01 Y01 . X 5 PCW B 1 802 807 PCW PCW . Y 3 Y01 B 1 803 801 Y01 Y01 . Z 4 CLR B 1 804 802 CLR CLR . AA 3 Y01 B 1 805 803 Y01 Y01 . BA 5 PCW B 1 806 804 PCW PCW . CA 5 PCW B 1 807 805 PCW PCW . DA 5 PCW B 1 808 809 PCW PCW . EA 5 PCW B 1 809 810 PCW PCW . FA 5 PCW B 1 810 815 PCW PCW . GA 5 PCW B 1 811 806 PCW PCW . HA 5 PCW B 1 812 811 PCW PCW . IA 5 PCW B 1 813 812 PCW PCW . JA 6 CA B 1 814 903 CA CA . KA 5 PCW C 1 801 807 PCW PCW . LA 5 PCW C 1 802 808 PCW PCW . MA 3 Y01 C 1 803 801 Y01 Y01 . NA 4 CLR C 1 804 802 CLR CLR . OA 3 Y01 C 1 805 803 Y01 Y01 . PA 5 PCW C 1 806 804 PCW PCW . QA 5 PCW C 1 807 805 PCW PCW . RA 5 PCW C 1 808 809 PCW PCW . SA 5 PCW C 1 809 810 PCW PCW . TA 5 PCW C 1 810 815 PCW PCW . UA 5 PCW C 1 811 806 PCW PCW . VA 5 PCW C 1 812 811 PCW PCW . WA 5 PCW C 1 813 812 PCW PCW . XA 5 PCW D 1 801 806 PCW PCW . YA 5 PCW D 1 802 811 PCW PCW . ZA 5 PCW D 1 803 812 PCW PCW . AB 5 PCW D 1 804 807 PCW PCW . BB 5 PCW D 1 805 808 PCW PCW . CB 3 Y01 D 1 806 801 Y01 Y01 . DB 4 CLR D 1 807 802 CLR CLR . EB 5 PCW D 1 808 804 PCW PCW . FB 5 PCW D 1 809 805 PCW PCW . GB 5 PCW D 1 810 808 PCW PCW . HB 5 PCW D 1 811 809 PCW PCW . IB 5 PCW D 1 812 810 PCW PCW . JB 5 PCW D 1 813 813 PCW PCW . KB 5 PCW D 1 814 815 PCW PCW . LB 6 CA E 1 401 401 CA CA . MB 6 CA E 1 402 402 CA CA . NB 6 CA E 1 403 403 CA CA . OB 6 CA E 1 404 404 CA CA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C12 PCW . . . JB 5 148.361 165.476 107.69 1 27.6 ? C12 PCW 813 D 1 HETATM 2 C C13 PCW . . . JB 5 147.439 166.331 108.621 1 27.6 ? C13 PCW 813 D 1 HETATM 3 C C14 PCW . . . JB 5 146.294 165.478 109.265 1 27.6 ? C14 PCW 813 D 1 HETATM 4 C C15 PCW . . . JB 5 145.636 166.188 110.494 1 27.6 ? C15 PCW 813 D 1 HETATM 5 C C16 PCW . . . JB 5 145.922 165.457 111.844 1 27.6 ? C16 PCW 813 D 1 HETATM 6 C C17 PCW . . . JB 5 147.424 165.534 112.268 1 27.6 ? C17 PCW 813 D 1 HETATM 7 C C18 PCW . . . JB 5 147.859 164.317 113.145 1 27.6 ? C18 PCW 813 D 1 HETATM 8 C C19 PCW . . . JB 5 147.154 164.306 114.534 1 27.6 ? C19 PCW 813 D 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 72 _model_server_stats.query_time_ms 738 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 8 #