data_9CV4 # _model_server_result.job_id eaFLxuI9mG4eyub3jM6SCA _model_server_result.datetime_utc '2025-07-10 07:06:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9cv4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 9CV4 # _exptl.entry_id 9CV4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 217.285 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-(3-MERCAPTO-2-METHYL-PROPIONYL)-PYRROLIDINE-2-CARBOXYLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9CV4 _cell.length_a 67.58 _cell.length_b 77.14 _cell.length_c 79.01 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9CV4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 91 A HIS 114 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc2 A ND1 HIS 93 A HIS 116 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc3 A OD2 ASP 95 A ASP 118 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc4 A NE2 HIS 130 A HIS 153 1_555 D ZN ZN . A ZN 303 6_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc5 A NE2 HIS 156 A HIS 179 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc6 A SG CYS 175 A CYS 198 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc7 A NE2 HIS 217 A HIS 240 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc8 A ND1 HIS 228 A HIS 251 1_555 D ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc9 B ZN ZN . A ZN 301 1_555 E S MCO . A MCO 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc10 C ZN ZN . A ZN 302 1_555 E S MCO . A MCO 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc11 D ZN ZN . A ZN 303 1_555 F O HOH . A HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc12 D ZN ZN . A ZN 303 1_555 F O HOH . A HOH 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? # _chem_comp.formula 'C9 H15 N O3 S' _chem_comp.formula_weight 217.285 _chem_comp.id MCO _chem_comp.mon_nstd_flag . _chem_comp.name '1-(3-MERCAPTO-2-METHYL-PROPIONYL)-PYRROLIDINE-2-CARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 C9 MCO doub 218 n n C9 O3 MCO sing 219 n n C9 C8 MCO sing 220 n n O3 HO31 MCO sing 221 n n C8 C7 MCO sing 222 n n C8 N MCO sing 223 n n C8 HC81 MCO sing 224 n n C7 C6 MCO sing 225 n n C7 HC71 MCO sing 226 n n C7 HC72 MCO sing 227 n n C6 C5 MCO sing 228 n n C6 HC61 MCO sing 229 n n C6 HC62 MCO sing 230 n n C5 N MCO sing 231 n n C5 HC51 MCO sing 232 n n C5 HC52 MCO sing 233 n n N C4 MCO sing 234 n n C4 O1 MCO doub 235 n n C4 C2 MCO sing 236 n n C2 C3 MCO sing 237 n n C2 C1 MCO sing 238 n n C2 HC21 MCO sing 239 n n C3 HC31 MCO sing 240 n n C3 HC32 MCO sing 241 n n C3 HC33 MCO sing 242 n n C1 S MCO sing 243 n n C1 HC11 MCO sing 244 n n C1 HC12 MCO sing 245 n n S HS1 MCO sing 246 n n # _atom_sites.entry_id 9CV4 _atom_sites.fract_transf_matrix[1][1] 0.014797 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012963 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012657 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 301 ZN ZN . C 2 ZN A 1 302 302 ZN ZN . D 2 ZN A 1 303 303 ZN ZN . E 3 MCO A 1 304 304 MCO MCO . F 4 HOH A 1 401 159 HOH HOH . F 4 HOH A 2 402 66 HOH HOH . F 4 HOH A 3 403 160 HOH HOH . F 4 HOH A 4 404 154 HOH HOH . F 4 HOH A 5 405 5 HOH HOH . F 4 HOH A 6 406 166 HOH HOH . F 4 HOH A 7 407 165 HOH HOH . F 4 HOH A 8 408 43 HOH HOH . F 4 HOH A 9 409 89 HOH HOH . F 4 HOH A 10 410 156 HOH HOH . F 4 HOH A 11 411 53 HOH HOH . F 4 HOH A 12 412 28 HOH HOH . F 4 HOH A 13 413 68 HOH HOH . F 4 HOH A 14 414 110 HOH HOH . F 4 HOH A 15 415 144 HOH HOH . F 4 HOH A 16 416 24 HOH HOH . F 4 HOH A 17 417 45 HOH HOH . F 4 HOH A 18 418 164 HOH HOH . F 4 HOH A 19 419 116 HOH HOH . F 4 HOH A 20 420 17 HOH HOH . F 4 HOH A 21 421 113 HOH HOH . F 4 HOH A 22 422 83 HOH HOH . F 4 HOH A 23 423 49 HOH HOH . F 4 HOH A 24 424 4 HOH HOH . F 4 HOH A 25 425 61 HOH HOH . F 4 HOH A 26 426 41 HOH HOH . F 4 HOH A 27 427 50 HOH HOH . F 4 HOH A 28 428 95 HOH HOH . F 4 HOH A 29 429 9 HOH HOH . F 4 HOH A 30 430 108 HOH HOH . F 4 HOH A 31 431 11 HOH HOH . F 4 HOH A 32 432 70 HOH HOH . F 4 HOH A 33 433 147 HOH HOH . F 4 HOH A 34 434 26 HOH HOH . F 4 HOH A 35 435 16 HOH HOH . F 4 HOH A 36 436 37 HOH HOH . F 4 HOH A 37 437 13 HOH HOH . F 4 HOH A 38 438 34 HOH HOH . F 4 HOH A 39 439 114 HOH HOH . F 4 HOH A 40 440 123 HOH HOH . F 4 HOH A 41 441 8 HOH HOH . F 4 HOH A 42 442 6 HOH HOH . F 4 HOH A 43 443 22 HOH HOH . F 4 HOH A 44 444 85 HOH HOH . F 4 HOH A 45 445 127 HOH HOH . F 4 HOH A 46 446 48 HOH HOH . F 4 HOH A 47 447 38 HOH HOH . F 4 HOH A 48 448 35 HOH HOH . F 4 HOH A 49 449 62 HOH HOH . F 4 HOH A 50 450 96 HOH HOH . F 4 HOH A 51 451 14 HOH HOH . F 4 HOH A 52 452 39 HOH HOH . F 4 HOH A 53 453 55 HOH HOH . F 4 HOH A 54 454 2 HOH HOH . F 4 HOH A 55 455 31 HOH HOH . F 4 HOH A 56 456 172 HOH HOH . F 4 HOH A 57 457 152 HOH HOH . F 4 HOH A 58 458 87 HOH HOH . F 4 HOH A 59 459 47 HOH HOH . F 4 HOH A 60 460 130 HOH HOH . F 4 HOH A 61 461 161 HOH HOH . F 4 HOH A 62 462 67 HOH HOH . F 4 HOH A 63 463 1 HOH HOH . F 4 HOH A 64 464 109 HOH HOH . F 4 HOH A 65 465 52 HOH HOH . F 4 HOH A 66 466 146 HOH HOH . F 4 HOH A 67 467 107 HOH HOH . F 4 HOH A 68 468 101 HOH HOH . F 4 HOH A 69 469 3 HOH HOH . F 4 HOH A 70 470 20 HOH HOH . F 4 HOH A 71 471 10 HOH HOH . F 4 HOH A 72 472 51 HOH HOH . F 4 HOH A 73 473 74 HOH HOH . F 4 HOH A 74 474 128 HOH HOH . F 4 HOH A 75 475 82 HOH HOH . F 4 HOH A 76 476 103 HOH HOH . F 4 HOH A 77 477 58 HOH HOH . F 4 HOH A 78 478 153 HOH HOH . F 4 HOH A 79 479 42 HOH HOH . F 4 HOH A 80 480 141 HOH HOH . F 4 HOH A 81 481 57 HOH HOH . F 4 HOH A 82 482 69 HOH HOH . F 4 HOH A 83 483 77 HOH HOH . F 4 HOH A 84 484 27 HOH HOH . F 4 HOH A 85 485 151 HOH HOH . F 4 HOH A 86 486 135 HOH HOH . F 4 HOH A 87 487 29 HOH HOH . F 4 HOH A 88 488 18 HOH HOH . F 4 HOH A 89 489 30 HOH HOH . F 4 HOH A 90 490 19 HOH HOH . F 4 HOH A 91 491 59 HOH HOH . F 4 HOH A 92 492 21 HOH HOH . F 4 HOH A 93 493 143 HOH HOH . F 4 HOH A 94 494 129 HOH HOH . F 4 HOH A 95 495 63 HOH HOH . F 4 HOH A 96 496 84 HOH HOH . F 4 HOH A 97 497 148 HOH HOH . F 4 HOH A 98 498 171 HOH HOH . F 4 HOH A 99 499 80 HOH HOH . F 4 HOH A 100 500 105 HOH HOH . F 4 HOH A 101 501 119 HOH HOH . F 4 HOH A 102 502 149 HOH HOH . F 4 HOH A 103 503 124 HOH HOH . F 4 HOH A 104 504 23 HOH HOH . F 4 HOH A 105 505 56 HOH HOH . F 4 HOH A 106 506 118 HOH HOH . F 4 HOH A 107 507 94 HOH HOH . F 4 HOH A 108 508 142 HOH HOH . F 4 HOH A 109 509 72 HOH HOH . F 4 HOH A 110 510 170 HOH HOH . F 4 HOH A 111 511 163 HOH HOH . F 4 HOH A 112 512 106 HOH HOH . F 4 HOH A 113 513 98 HOH HOH . F 4 HOH A 114 514 99 HOH HOH . F 4 HOH A 115 515 7 HOH HOH . F 4 HOH A 116 516 76 HOH HOH . F 4 HOH A 117 517 12 HOH HOH . F 4 HOH A 118 518 133 HOH HOH . F 4 HOH A 119 519 121 HOH HOH . F 4 HOH A 120 520 36 HOH HOH . F 4 HOH A 121 521 120 HOH HOH . F 4 HOH A 122 522 167 HOH HOH . F 4 HOH A 123 523 137 HOH HOH . F 4 HOH A 124 524 150 HOH HOH . F 4 HOH A 125 525 174 HOH HOH . F 4 HOH A 126 526 126 HOH HOH . F 4 HOH A 127 527 75 HOH HOH . F 4 HOH A 128 528 71 HOH HOH . F 4 HOH A 129 529 73 HOH HOH . F 4 HOH A 130 530 115 HOH HOH . F 4 HOH A 131 531 15 HOH HOH . F 4 HOH A 132 532 104 HOH HOH . F 4 HOH A 133 533 168 HOH HOH . F 4 HOH A 134 534 162 HOH HOH . F 4 HOH A 135 535 131 HOH HOH . F 4 HOH A 136 536 97 HOH HOH . F 4 HOH A 137 537 169 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 MCO . . . E 3 -31.895 -20.188 -7.659 0.79 34.36 ? O2 MCO 304 A 1 HETATM 2 C C9 MCO . . . E 3 -31.147 -19.87 -6.714 0.79 29.96 ? C9 MCO 304 A 1 HETATM 3 O O3 MCO . . . E 3 -31.491 -19.364 -5.639 0.79 35.38 ? O3 MCO 304 A 1 HETATM 4 C C8 MCO . . . E 3 -29.646 -20.175 -6.84 0.79 26.14 ? C8 MCO 304 A 1 HETATM 5 C C7 MCO . . . E 3 -29.029 -20.225 -5.441 0.79 29.5 ? C7 MCO 304 A 1 HETATM 6 C C6 MCO . . . E 3 -29.356 -21.639 -4.93 0.79 31.33 ? C6 MCO 304 A 1 HETATM 7 C C5 MCO . . . E 3 -30.246 -22.262 -6.01 0.79 28.76 ? C5 MCO 304 A 1 HETATM 8 N N MCO . . . E 3 -29.651 -21.569 -7.139 0.79 23.87 ? N MCO 304 A 1 HETATM 9 C C4 MCO . . . E 3 -29.207 -22.092 -8.273 0.79 23.45 ? C4 MCO 304 A 1 HETATM 10 O O1 MCO . . . E 3 -29.278 -23.295 -8.452 0.79 23.56 ? O1 MCO 304 A 1 HETATM 11 C C2 MCO . . . E 3 -28.58 -21.21 -9.334 0.79 21.05 ? C2 MCO 304 A 1 HETATM 12 C C3 MCO . . . E 3 -29.608 -20.778 -10.378 0.79 20.2 ? C3 MCO 304 A 1 HETATM 13 C C1 MCO . . . E 3 -27.504 -22.059 -9.992 0.79 14.79 ? C1 MCO 304 A 1 HETATM 14 S S MCO . . . E 3 -26.123 -22.538 -8.887 0.79 13.36 ? S MCO 304 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #