data_9CVQ
#
_model_server_result.job_id            YjIclZ_g0LWDF3L7ZOhFag 
_model_server_result.datetime_utc      '2025-08-03 12:26:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9cvq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":804}' 
#
_entry.id    9CVQ 
#
_exptl.entry_id    9CVQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              325.304 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (6M)-6-{5-[(3,3-difluoroazetidin-1-yl)methyl]-2,3-difluorophenyl}-4-methylpyridin-2-amine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9CVQ 
_cell.length_a            48.638 
_cell.length_b            113.175 
_cell.length_c            163.242 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9CVQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 30 A CYS 326 1_555 D ZN ZN . A ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc2 A SG CYS 30 A CYS 326 1_555 D ZN ZN . A ZN 803 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? 
metalc ? metalc3 A SG CYS 35 A CYS 331 1_555 D ZN ZN . A ZN 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? 
metalc ? metalc4 A SG CYS 35 A CYS 331 1_555 D ZN ZN . A ZN 803 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc5 A SG CYS 119 A CYS 415 1_555 B FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? 
#
_chem_comp.formula           'C16 H15 F4 N3' 
_chem_comp.formula_weight    325.304 
_chem_comp.id                A1A0D 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (6M)-6-{5-[(3,3-difluoroazetidin-1-yl)methyl]-2,3-difluorophenyl}-4-methylpyridin-2-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C07 C04 A1A0D sing 1 n n 
C04 C03 A1A0D doub 2 n y 
C04 C05 A1A0D sing 3 n y 
C03 C02 A1A0D sing 4 n y 
C05 C06 A1A0D doub 5 n y 
C02 N01 A1A0D doub 6 n y 
C02 N02 A1A0D sing 7 n n 
F12 C12 A1A0D sing 8 n n 
C06 N01 A1A0D sing 9 n y 
C06 C11 A1A0D sing 10 n n 
F23 C20 A1A0D sing 11 n n 
C12 C11 A1A0D doub 12 n y 
C12 C13 A1A0D sing 13 n y 
C11 C16 A1A0D sing 14 n y 
F13 C13 A1A0D sing 15 n n 
C13 C14 A1A0D doub 16 n y 
C16 C15 A1A0D doub 17 n y 
N18 C19 A1A0D sing 18 n n 
N18 C21 A1A0D sing 19 n n 
N18 C17 A1A0D sing 20 n n 
C19 C20 A1A0D sing 21 n n 
C14 C15 A1A0D sing 22 n y 
C15 C17 A1A0D sing 23 n n 
C21 C20 A1A0D sing 24 n n 
C20 F22 A1A0D sing 25 n n 
C16 H1 A1A0D sing 26 n n 
C17 H2 A1A0D sing 27 n n 
C17 H3 A1A0D sing 28 n n 
C19 H4 A1A0D sing 29 n n 
C19 H5 A1A0D sing 30 n n 
C21 H6 A1A0D sing 31 n n 
C21 H7 A1A0D sing 32 n n 
C03 H8 A1A0D sing 33 n n 
C05 H9 A1A0D sing 34 n n 
C07 H10 A1A0D sing 35 n n 
C07 H11 A1A0D sing 36 n n 
C07 H12 A1A0D sing 37 n n 
C14 H13 A1A0D sing 38 n n 
N02 H14 A1A0D sing 39 n n 
N02 H15 A1A0D sing 40 n n 
#
_atom_sites.entry_id                     9CVQ 
_atom_sites.fract_transf_matrix[1][1]    0.02056 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008836 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006126 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HEM A 1 801 750 HEM HEM . 
C 3 H4B A 1 802 760 H4B BH4 . 
D 4 ZN A 1 803 900 ZN ZN . 
E 5 A1A0D A 1 804 800 A1A0D 2V3 . 
F 6 HOH A 1 901 10 HOH HOH . 
F 6 HOH A 2 902 48 HOH HOH . 
F 6 HOH A 3 903 25 HOH HOH . 
F 6 HOH A 4 904 5 HOH HOH . 
F 6 HOH A 5 905 41 HOH HOH . 
F 6 HOH A 6 906 47 HOH HOH . 
F 6 HOH A 7 907 23 HOH HOH . 
F 6 HOH A 8 908 17 HOH HOH . 
F 6 HOH A 9 909 50 HOH HOH . 
F 6 HOH A 10 910 37 HOH HOH . 
F 6 HOH A 11 911 43 HOH HOH . 
F 6 HOH A 12 912 8 HOH HOH . 
F 6 HOH A 13 913 30 HOH HOH . 
F 6 HOH A 14 914 26 HOH HOH . 
F 6 HOH A 15 915 49 HOH HOH . 
F 6 HOH A 16 916 36 HOH HOH . 
F 6 HOH A 17 917 34 HOH HOH . 
F 6 HOH A 18 918 9 HOH HOH . 
F 6 HOH A 19 919 16 HOH HOH . 
F 6 HOH A 20 920 19 HOH HOH . 
F 6 HOH A 21 921 27 HOH HOH . 
F 6 HOH A 22 922 2 HOH HOH . 
F 6 HOH A 23 923 1 HOH HOH . 
F 6 HOH A 24 924 24 HOH HOH . 
F 6 HOH A 25 925 14 HOH HOH . 
F 6 HOH A 26 926 11 HOH HOH . 
F 6 HOH A 27 927 22 HOH HOH . 
F 6 HOH A 28 928 6 HOH HOH . 
F 6 HOH A 29 929 3 HOH HOH . 
F 6 HOH A 30 930 4 HOH HOH . 
F 6 HOH A 31 931 29 HOH HOH . 
F 6 HOH A 32 932 20 HOH HOH . 
F 6 HOH A 33 933 33 HOH HOH . 
F 6 HOH A 34 934 38 HOH HOH . 
F 6 HOH A 35 935 13 HOH HOH . 
F 6 HOH A 36 936 40 HOH HOH . 
F 6 HOH A 37 937 46 HOH HOH . 
F 6 HOH A 38 938 15 HOH HOH . 
F 6 HOH A 39 939 31 HOH HOH . 
F 6 HOH A 40 940 52 HOH HOH . 
F 6 HOH A 41 941 7 HOH HOH . 
F 6 HOH A 42 942 21 HOH HOH . 
F 6 HOH A 43 943 42 HOH HOH . 
F 6 HOH A 44 944 28 HOH HOH . 
F 6 HOH A 45 945 12 HOH HOH . 
F 6 HOH A 46 946 39 HOH HOH . 
F 6 HOH A 47 947 18 HOH HOH . 
F 6 HOH A 48 948 44 HOH HOH . 
F 6 HOH A 49 949 51 HOH HOH . 
F 6 HOH A 50 950 35 HOH HOH . 
F 6 HOH A 51 951 32 HOH HOH . 
F 6 HOH A 52 952 45 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C11 A1A0D . . . E 5 -22.378 -1.528 23.513 1 64.32 ? C11 A1A0D 804 A 1 
HETATM 2 C C12 A1A0D . . . E 5 -21.396 -0.568 23.471 1 64.82 ? C12 A1A0D 804 A 1 
HETATM 3 C C13 A1A0D . . . E 5 -20.123 -0.852 23.904 1 68.27 ? C13 A1A0D 804 A 1 
HETATM 4 C C15 A1A0D . . . E 5 -20.814 -3.091 24.447 1 67.1 ? C15 A1A0D 804 A 1 
HETATM 5 C C16 A1A0D . . . E 5 -22.101 -2.804 23.997 1 62.53 ? C16 A1A0D 804 A 1 
HETATM 6 C C17 A1A0D . . . E 5 -20.455 -4.451 24.994 1 73.06 ? C17 A1A0D 804 A 1 
HETATM 7 C C19 A1A0D . . . E 5 -18.859 -6.179 24.446 1 86.6 ? C19 A1A0D 804 A 1 
HETATM 8 C C20 A1A0D . . . E 5 -17.758 -6.069 25.485 1 88.1 ? C20 A1A0D 804 A 1 
HETATM 9 C C21 A1A0D . . . E 5 -18.102 -4.61 25.706 1 84.86 ? C21 A1A0D 804 A 1 
HETATM 10 C C02 A1A0D . . . E 5 -25.608 0.28 23.118 1 61.06 ? C02 A1A0D 804 A 1 
HETATM 11 C C03 A1A0D . . . E 5 -26.222 -0.458 22.101 1 58.17 ? C03 A1A0D 804 A 1 
HETATM 12 C C04 A1A0D . . . E 5 -25.552 -1.542 21.546 1 60.72 ? C04 A1A0D 804 A 1 
HETATM 13 C C05 A1A0D . . . E 5 -24.302 -1.895 22.016 1 60.67 ? C05 A1A0D 804 A 1 
HETATM 14 C C06 A1A0D . . . E 5 -23.726 -1.149 23.029 1 62.11 ? C06 A1A0D 804 A 1 
HETATM 15 C C07 A1A0D . . . E 5 -26.157 -2.356 20.428 1 58.15 ? C07 A1A0D 804 A 1 
HETATM 16 C C14 A1A0D . . . E 5 -19.831 -2.115 24.387 1 69.19 ? C14 A1A0D 804 A 1 
HETATM 17 F F12 A1A0D . . . E 5 -21.674 0.651 22.986 1 65.95 ? F12 A1A0D 804 A 1 
HETATM 18 F F13 A1A0D . . . E 5 -19.185 0.104 23.845 1 80.35 ? F13 A1A0D 804 A 1 
HETATM 19 F F22 A1A0D . . . E 5 -17.961 -6.78 26.573 1 93.61 ? F22 A1A0D 804 A 1 
HETATM 20 F F23 A1A0D . . . E 5 -16.568 -6.264 24.928 1 89.51 ? F23 A1A0D 804 A 1 
HETATM 21 N N01 A1A0D . . . E 5 -24.375 -0.08 23.548 1 62.11 ? N01 A1A0D 804 A 1 
HETATM 22 N N02 A1A0D . . . E 5 -26.231 1.342 23.684 1 58.46 ? N02 A1A0D 804 A 1 
HETATM 23 N N18 A1A0D . . . E 5 -19.074 -4.728 24.596 1 79.46 ? N18 A1A0D 804 A 1 
#
_model_server_stats.io_time_ms              30 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           23 
#