data_9CZD # _model_server_result.job_id TtfozEUCrItCL0mkagmEhg _model_server_result.datetime_utc '2024-11-23 12:06:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9czd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":2101}' # _entry.id 9CZD # _exptl.entry_id 9CZD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 511.628 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-{5-fluoro-2-[(2S)-oxan-2-yl]phenyl}{(3R)-3-[4-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)butoxy]pyrrolidin-1-yl}acetic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9CZD _cell.length_a 96.08 _cell.length_b 132.72 _cell.length_c 167.9 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9CZD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 11 _struct_asym.id R _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 5 oligosaccharide 6 oligosaccharide 7 oligosaccharide 8 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 5 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 5 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 6 2 1 NAG NAG C1 O1 . O4 HO4 . sing 4 ? 6 3 2 BMA NAG C1 O1 . O4 HO4 . sing 5 ? 6 4 3 MAN BMA C1 O1 . O6 HO6 . sing 6 ? 6 5 4 MAN MAN C1 O1 . O3 HO3 . sing 7 ? 6 6 4 MAN MAN C1 O1 . O6 HO6 . sing 8 ? 7 2 1 NAG NAG C1 O1 . O4 HO4 . sing 9 ? 7 3 2 BMA NAG C1 O1 . O4 HO4 . sing 10 ? 7 4 3 MAN BMA C1 O1 . O3 HO3 . sing 11 ? 7 5 3 MAN BMA C1 O1 . O6 HO6 . sing 12 ? 8 2 1 NAG NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 5 n E NAG 1 I 1 NAG I 3044 NAG 5 n E NAG 2 I 2 NAG I 3045 NAG 5 n E BMA 3 I 3 BMA I 3046 BMA 6 n F NAG 1 E 1 NAG I 3260 NAG 6 n F NAG 2 E 2 NAG I 3261 NAG 6 n F BMA 3 E 3 BMA I 3262 BMA 6 n F MAN 4 E 4 MAN I 3263 MAN 6 n F MAN 5 E 5 MAN I 3265 MAN 6 n F MAN 6 E 6 MAN I 3264 MAN 7 n G NAG 1 F 1 NAG I 3266 NAG 7 n G NAG 2 F 2 NAG I 3267 NAG 7 n G BMA 3 F 3 BMA I 3268 BMA 7 n G MAN 4 F 4 MAN I 3269 MAN 7 n G MAN 5 F 5 MAN I 3270 MAN 5 n H NAG 1 G 1 NAG G 8003 NAG 5 n H NAG 2 G 2 NAG G 8004 NAG 5 n H BMA 3 G 3 BMA G 8005 BMA 8 n I NAG 1 L 1 NAG L 3 NAG 8 n I NAG 2 L 2 NAG L 4 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 59 A CYS 59 1_555 A SG CYS 67 A CYS 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf2 A SG CYS 108 A CYS 108 1_555 A SG CYS 128 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 A SG CYS 142 A CYS 142 1_555 A SG CYS 155 A CYS 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf4 A SG CYS 400 A CYS 400 1_555 B SG CYS 266 B CYS 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf5 A SG CYS 461 A CYS 461 1_555 A SG CYS 472 A CYS 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf6 A SG CYS 478 A CYS 478 1_555 A SG CYS 535 A CYS 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 B SG CYS 2 B CYS 6 1_555 B SG CYS 20 B CYS 24 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf8 B SG CYS 10 B CYS 14 1_555 B SG CYS 433 B CYS 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf9 B SG CYS 13 B CYS 17 1_555 B SG CYS 38 B CYS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf10 B SG CYS 23 B CYS 27 1_555 B SG CYS 49 B CYS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf11 B SG CYS 176 B CYS 180 1_555 B SG CYS 183 B CYS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf12 B SG CYS 231 B CYS 235 1_555 B SG CYS 272 B CYS 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf13 B SG CYS 373 B CYS 377 1_555 B SG CYS 385 B CYS 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf14 B SG CYS 405 B CYS 409 1_555 B SG CYS 431 B CYS 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf15 B SG CYS 435 B CYS 439 1_555 B SG CYS 455 B CYS 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf16 B SG CYS 446 B CYS 450 1_555 B SG CYS 458 B CYS 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf17 B SG CYS 460 B CYS 464 1_555 B SG CYS 469 B CYS 473 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf18 C SG CYS 23 C CYS 23 1_555 C SG CYS 88 C CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf19 C SG CYS 134 C CYS 134 1_555 C SG CYS 194 C CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf20 C SG CYS 214 C CYS 214 1_555 D SG CYS 133 D CYS 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf21 D SG CYS 22 D CYS 22 1_555 D SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf22 D SG CYS 145 D CYS 145 1_555 D SG CYS 200 D CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? covale ? covale1 A ND2 ASN 44 A ASN 44 1_555 E C1 NAG . I NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale2 A ND2 ASN 260 A ASN 260 1_555 F C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale3 A ND2 ASN 266 A ASN 266 1_555 G C1 NAG . F NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? covale ? covale4 A ND2 ASN 458 A ASN 458 1_555 H C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale5 B ND2 ASN 239 B ASN 243 1_555 V C1 NAG . B NAG 2105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? covale ? covale6 E O4 NAG . I NAG 1 1_555 E C1 NAG . I NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? covale ? covale7 E O4 NAG . I NAG 2 1_555 E C1 BMA . I BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale8 F O4 NAG . E NAG 1 1_555 F C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale9 F O4 NAG . E NAG 2 1_555 F C1 BMA . E BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale10 F O6 BMA . E BMA 3 1_555 F C1 MAN . E MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? covale ? covale11 F O3 MAN . E MAN 4 1_555 F C1 MAN . E MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale12 F O6 MAN . E MAN 4 1_555 F C1 MAN . E MAN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale13 G O4 NAG . F NAG 1 1_555 G C1 NAG . F NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.428 ? covale ? covale14 G O4 NAG . F NAG 2 1_555 G C1 BMA . F BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale15 G O3 BMA . F BMA 3 1_555 G C1 MAN . F MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? covale ? covale16 G O6 BMA . F BMA 3 1_555 G C1 MAN . F MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale17 H O4 NAG . G NAG 1 1_555 H C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? covale ? covale18 H O4 NAG . G NAG 2 1_555 H C1 BMA . G BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale19 I O4 NAG . L NAG 1 1_555 I C1 NAG . L NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.484 ? metalc ? metalc1 A OD1 ASP 230 A ASP 230 1_555 J CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc2 A OD1 ASN 232 A ASN 232 1_555 J CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc3 A OD1 ASP 234 A ASP 234 1_555 J CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc4 A O ILE 236 A ILE 236 1_555 J CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc5 A OD1 ASP 238 A ASP 238 1_555 J CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.437 ? metalc ? metalc6 A OD2 ASP 238 A ASP 238 1_555 J CA CA . A CA 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc7 A OD1 ASP 284 A ASP 284 1_555 M CA CA . A CA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc8 A OD1 ASN 286 A ASN 286 1_555 M CA CA . A CA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc9 A OD1 ASP 288 A ASP 288 1_555 M CA CA . A CA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc10 A O TYR 290 A TYR 290 1_555 M CA CA . A CA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc11 A OD1 ASP 292 A ASP 292 1_555 M CA CA . A CA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc12 A OD2 ASP 292 A ASP 292 1_555 M CA CA . A CA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc13 A OD1 ASP 349 A ASP 349 1_555 K CA CA . A CA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc14 A OD1 ASP 351 A ASP 351 1_555 K CA CA . A CA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc15 A OD1 ASP 353 A ASP 353 1_555 K CA CA . A CA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc16 A O PHE 355 A PHE 355 1_555 K CA CA . A CA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc17 A OD1 ASP 357 A ASP 357 1_555 K CA CA . A CA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc18 A OD2 ASP 357 A ASP 357 1_555 K CA CA . A CA 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc19 A OD1 ASP 413 A ASP 413 1_555 L CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc20 A OD1 ASP 415 A ASP 415 1_555 L CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc21 A OD1 ASN 417 A ASN 417 1_555 L CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc22 A O TYR 419 A TYR 419 1_555 L CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc23 A OD1 ASP 421 A ASP 421 1_555 L CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc24 A OD2 ASP 421 A ASP 421 1_555 L CA CA . A CA 2003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? metalc ? metalc25 J CA CA . A CA 2001 1_555 CA O HOH . A HOH 2104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc26 K CA CA . A CA 2002 1_555 CA O HOH . A HOH 2117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc27 L CA CA . A CA 2003 1_555 CA O HOH . A HOH 2112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc28 M CA CA . A CA 2004 1_555 CA O HOH . A HOH 2107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc29 B OG SER 121 B SER 125 1_555 S MG MG . B MG 2102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc30 B O SER 123 B SER 127 1_555 U CA CA . B CA 2104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc31 B OD1 ASP 126 B ASP 130 1_555 U CA CA . B CA 2104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc32 B OD2 ASP 126 B ASP 130 1_555 U CA CA . B CA 2104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc33 B OD1 ASP 127 B ASP 131 1_555 U CA CA . B CA 2104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc34 B OE2 GLU 158 B GLU 162 1_555 T CA CA . B CA 2103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc35 B OD1 ASN 214 B ASN 218 1_555 T CA CA . B CA 2103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc36 B O ASP 216 B ASP 220 1_555 T CA CA . B CA 2103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc37 B OD1 ASP 216 B ASP 220 1_555 T CA CA . B CA 2103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? metalc ? metalc38 B O PRO 218 B PRO 222 1_555 T CA CA . B CA 2103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc39 B OE2 GLU 219 B GLU 223 1_555 S MG MG . B MG 2102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc40 B OE1 GLU 219 B GLU 223 1_555 T CA CA . B CA 2103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc41 B O LYS 334 B LYS 338 1_555 U CA CA . B CA 2104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc42 R O01 A1A6H . B A1A6H 2101 1_555 S MG MG . B MG 2102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc43 S MG MG . B MG 2102 1_555 DA O HOH . B HOH 2202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc44 S MG MG . B MG 2102 1_555 DA O HOH . B HOH 2205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc45 S MG MG . B MG 2102 1_555 DA O HOH . B HOH 2216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc46 U CA CA . B CA 2104 1_555 DA O HOH . B HOH 2207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc47 U CA CA . B CA 2104 1_555 DA O HOH . B HOH 2220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? # _chem_comp.formula 'C29 H38 F N3 O4' _chem_comp.formula_weight 511.628 _chem_comp.id A1A6H _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-{5-fluoro-2-[(2S)-oxan-2-yl]phenyl}{(3R)-3-[4-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)butoxy]pyrrolidin-1-yl}acetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C34 C33 A1A6H sing 1 n n C34 C35 A1A6H sing 2 n n C33 C30 A1A6H sing 3 n n C35 N36 A1A6H sing 4 n n C30 C31 A1A6H doub 5 n y C30 C29 A1A6H sing 6 n y N36 C29 A1A6H sing 7 n n C31 C32 A1A6H sing 8 n y C29 N28 A1A6H doub 9 n y C32 C27 A1A6H doub 10 n y N28 C27 A1A6H sing 11 n y C27 C26 A1A6H sing 12 n n C26 C25 A1A6H sing 13 n n C25 C24 A1A6H sing 14 n n C15 C16 A1A6H sing 15 n n C15 C14 A1A6H sing 16 n n C16 O17 A1A6H sing 17 n n C23 C24 A1A6H sing 18 n n C23 O22 A1A6H sing 19 n n O17 C12 A1A6H sing 20 n n C14 C13 A1A6H sing 21 n n O22 C21 A1A6H sing 22 n n C21 C37 A1A6H sing 23 n n C21 C20 A1A6H sing 24 n n C13 C12 A1A6H sing 25 n n C12 C11 A1A6H sing 26 n n C37 N18 A1A6H sing 27 n n C20 C19 A1A6H sing 28 n n C11 C10 A1A6H doub 29 n y C11 C05 A1A6H sing 30 n y C10 C09 A1A6H sing 31 n y C19 N18 A1A6H sing 32 n n N18 C04 A1A6H sing 33 n n C04 C05 A1A6H sing 34 n n C04 C02 A1A6H sing 35 n n C05 C06 A1A6H doub 36 n y C09 C07 A1A6H doub 37 n y C06 C07 A1A6H sing 38 n y C07 F08 A1A6H sing 39 n n C02 O01 A1A6H doub 40 n n C02 O03 A1A6H sing 41 n n C10 H1 A1A6H sing 42 n n C13 H2 A1A6H sing 43 n n C13 H3 A1A6H sing 44 n n C12 H4 A1A6H sing 45 n n C16 H5 A1A6H sing 46 n n C16 H6 A1A6H sing 47 n n C15 H7 A1A6H sing 48 n n C15 H8 A1A6H sing 49 n n C14 H9 A1A6H sing 50 n n C14 H10 A1A6H sing 51 n n C24 H11 A1A6H sing 52 n n C24 H12 A1A6H sing 53 n n C23 H13 A1A6H sing 54 n n C23 H14 A1A6H sing 55 n n C25 H15 A1A6H sing 56 n n C25 H16 A1A6H sing 57 n n C20 H17 A1A6H sing 58 n n C20 H18 A1A6H sing 59 n n C19 H19 A1A6H sing 60 n n C19 H20 A1A6H sing 61 n n C04 H22 A1A6H sing 62 n n C06 H23 A1A6H sing 63 n n C09 H24 A1A6H sing 64 n n C21 H25 A1A6H sing 65 n n C26 H26 A1A6H sing 66 n n C26 H27 A1A6H sing 67 n n C31 H28 A1A6H sing 68 n n C32 H29 A1A6H sing 69 n n C33 H30 A1A6H sing 70 n n C33 H31 A1A6H sing 71 n n C34 H32 A1A6H sing 72 n n C34 H33 A1A6H sing 73 n n C35 H34 A1A6H sing 74 n n C35 H35 A1A6H sing 75 n n C37 H36 A1A6H sing 76 n n C37 H37 A1A6H sing 77 n n N36 H38 A1A6H sing 78 n n O03 H39 A1A6H sing 79 n n # _atom_sites.entry_id 9CZD _atom_sites.fract_transf_matrix[1][1] 0.010408 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007535 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005956 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 9 CA A 1 2001 2001 CA CA . K 9 CA A 1 2002 2002 CA CA . L 9 CA A 1 2003 2003 CA CA . M 9 CA A 1 2004 2004 CA CA . N 10 GOL A 1 2005 3 GOL GOL . O 10 GOL A 1 2006 4 GOL GOL . P 10 GOL A 1 2007 5 GOL GOL . Q 10 GOL A 1 2008 9 GOL GOL . R 11 A1A6H B 1 2101 2101 A1A6H 138 . S 12 MG B 1 2102 2001 MG MG . T 9 CA B 1 2103 2002 CA CA . U 9 CA B 1 2104 2003 CA CA . V 13 NAG B 1 2105 2 NAG NAG . W 10 GOL B 1 2106 6 GOL GOL . X 10 GOL B 1 2107 8 GOL GOL . Y 14 ACT B 1 2108 3 ACT ACT . Z 10 GOL C 1 301 1 GOL GOL . AA 10 GOL D 1 301 7 GOL GOL . BA 14 ACT D 1 302 2 ACT ACT . CA 15 HOH A 1 2101 61 HOH HOH . CA 15 HOH A 2 2102 9 HOH HOH . CA 15 HOH A 3 2103 46 HOH HOH . CA 15 HOH A 4 2104 11 HOH HOH . CA 15 HOH A 5 2105 49 HOH HOH . CA 15 HOH A 6 2106 30 HOH HOH . CA 15 HOH A 7 2107 33 HOH HOH . CA 15 HOH A 8 2108 15 HOH HOH . CA 15 HOH A 9 2109 14 HOH HOH . CA 15 HOH A 10 2110 65 HOH HOH . CA 15 HOH A 11 2111 54 HOH HOH . CA 15 HOH A 12 2112 32 HOH HOH . CA 15 HOH A 13 2113 50 HOH HOH . CA 15 HOH A 14 2114 41 HOH HOH . CA 15 HOH A 15 2115 28 HOH HOH . CA 15 HOH A 16 2116 57 HOH HOH . CA 15 HOH A 17 2117 31 HOH HOH . CA 15 HOH A 18 2118 19 HOH HOH . CA 15 HOH A 19 2119 13 HOH HOH . CA 15 HOH A 20 2120 64 HOH HOH . CA 15 HOH A 21 2121 56 HOH HOH . CA 15 HOH A 22 2122 52 HOH HOH . CA 15 HOH A 23 2123 63 HOH HOH . CA 15 HOH A 24 2124 40 HOH HOH . CA 15 HOH A 25 2125 55 HOH HOH . CA 15 HOH A 26 2126 38 HOH HOH . CA 15 HOH A 27 2127 29 HOH HOH . CA 15 HOH A 28 2128 26 HOH HOH . CA 15 HOH A 29 2129 8 HOH HOH . CA 15 HOH A 30 2130 66 HOH HOH . CA 15 HOH A 31 2131 20 HOH HOH . CA 15 HOH A 32 2132 39 HOH HOH . CA 15 HOH A 33 2133 44 HOH HOH . CA 15 HOH A 34 2134 10 HOH HOH . CA 15 HOH A 35 2135 23 HOH HOH . CA 15 HOH A 36 2136 27 HOH HOH . CA 15 HOH A 37 2137 59 HOH HOH . CA 15 HOH A 38 2138 62 HOH HOH . CA 15 HOH A 39 2139 48 HOH HOH . DA 15 HOH B 1 2201 36 HOH HOH . DA 15 HOH B 2 2202 3 HOH HOH . DA 15 HOH B 3 2203 6 HOH HOH . DA 15 HOH B 4 2204 16 HOH HOH . DA 15 HOH B 5 2205 2 HOH HOH . DA 15 HOH B 6 2206 7 HOH HOH . DA 15 HOH B 7 2207 4 HOH HOH . DA 15 HOH B 8 2208 12 HOH HOH . DA 15 HOH B 9 2209 45 HOH HOH . DA 15 HOH B 10 2210 25 HOH HOH . DA 15 HOH B 11 2211 42 HOH HOH . DA 15 HOH B 12 2212 53 HOH HOH . DA 15 HOH B 13 2213 18 HOH HOH . DA 15 HOH B 14 2214 43 HOH HOH . DA 15 HOH B 15 2215 37 HOH HOH . DA 15 HOH B 16 2216 1 HOH HOH . DA 15 HOH B 17 2217 34 HOH HOH . DA 15 HOH B 18 2218 17 HOH HOH . DA 15 HOH B 19 2219 24 HOH HOH . DA 15 HOH B 20 2220 5 HOH HOH . DA 15 HOH B 21 2221 35 HOH HOH . EA 15 HOH C 1 401 60 HOH HOH . FA 15 HOH D 1 401 51 HOH HOH . FA 15 HOH D 2 402 22 HOH HOH . FA 15 HOH D 3 403 47 HOH HOH . FA 15 HOH D 4 404 58 HOH HOH . FA 15 HOH D 5 405 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 A1A6H . . . R 11 3.996 -48.64 -17.867 1 61.62 ? C10 A1A6H 2101 B 1 HETATM 2 C C13 A1A6H . . . R 11 2.146 -46.835 -18.979 1 63.63 ? C13 A1A6H 2101 B 1 HETATM 3 C C12 A1A6H . . . R 11 3.604 -46.352 -18.872 1 61.93 ? C12 A1A6H 2101 B 1 HETATM 4 C C11 A1A6H . . . R 11 4.338 -47.284 -17.894 1 60.83 ? C11 A1A6H 2101 B 1 HETATM 5 O O17 A1A6H . . . R 11 4.25 -46.384 -20.111 1 62.25 ? O17 A1A6H 2101 B 1 HETATM 6 C C16 A1A6H . . . R 11 3.651 -45.526 -21.045 1 63.26 ? C16 A1A6H 2101 B 1 HETATM 7 C C15 A1A6H . . . R 11 2.189 -45.908 -21.348 1 63.42 ? C15 A1A6H 2101 B 1 HETATM 8 C C14 A1A6H . . . R 11 1.365 -46.061 -20.057 1 64.13 ? C14 A1A6H 2101 B 1 HETATM 9 C C24 A1A6H . . . R 11 11.477 -46.56 -20.889 1 64.5 ? C24 A1A6H 2101 B 1 HETATM 10 C C23 A1A6H . . . R 11 10.521 -45.402 -20.556 1 63.65 ? C23 A1A6H 2101 B 1 HETATM 11 C C25 A1A6H . . . R 11 12.77 -46.047 -21.542 1 64.83 ? C25 A1A6H 2101 B 1 HETATM 12 C C27 A1A6H . . . R 11 13.984 -47.109 -23.461 1 68.75 ? C27 A1A6H 2101 B 1 HETATM 13 C C20 A1A6H . . . R 11 8.656 -43.804 -18.713 1 62.85 ? C20 A1A6H 2101 B 1 HETATM 14 C C19 A1A6H . . . R 11 7.564 -43.76 -17.627 1 64.61 ? C19 A1A6H 2101 B 1 HETATM 15 N N18 A1A6H . . . R 11 7.17 -45.188 -17.385 1 65.27 ? N18 A1A6H 2101 B 1 HETATM 16 C C02 A1A6H . . . R 11 5.474 -44.678 -15.669 1 58.72 ? C02 A1A6H 2101 B 1 HETATM 17 C C04 A1A6H . . . R 11 5.713 -45.301 -17.055 1 61.17 ? C04 A1A6H 2101 B 1 HETATM 18 C C05 A1A6H . . . R 11 5.325 -46.792 -17.033 1 59.81 ? C05 A1A6H 2101 B 1 HETATM 19 C C06 A1A6H . . . R 11 5.971 -47.665 -16.152 1 58.64 ? C06 A1A6H 2101 B 1 HETATM 20 C C07 A1A6H . . . R 11 5.629 -49.022 -16.13 1 58.79 ? C07 A1A6H 2101 B 1 HETATM 21 C C09 A1A6H . . . R 11 4.643 -49.512 -16.987 1 58.94 ? C09 A1A6H 2101 B 1 HETATM 22 C C21 A1A6H . . . R 11 8.476 -45.145 -19.451 1 62.87 ? C21 A1A6H 2101 B 1 HETATM 23 C C26 A1A6H . . . R 11 13.723 -47.187 -21.949 1 67.03 ? C26 A1A6H 2101 B 1 HETATM 24 C C29 A1A6H . . . R 11 15.114 -46.074 -25.252 1 68.97 ? C29 A1A6H 2101 B 1 HETATM 25 C C30 A1A6H . . . R 11 14.478 -46.911 -26.174 1 71.6 ? C30 A1A6H 2101 B 1 HETATM 26 C C31 A1A6H . . . R 11 13.557 -47.865 -25.718 1 72.41 ? C31 A1A6H 2101 B 1 HETATM 27 C C32 A1A6H . . . R 11 13.309 -47.965 -24.341 1 71.76 ? C32 A1A6H 2101 B 1 HETATM 28 C C33 A1A6H . . . R 11 14.788 -46.745 -27.67 1 70.7 ? C33 A1A6H 2101 B 1 HETATM 29 C C34 A1A6H . . . R 11 15.04 -45.265 -28.003 1 69.39 ? C34 A1A6H 2101 B 1 HETATM 30 C C35 A1A6H . . . R 11 16.115 -44.618 -27.108 1 69.18 ? C35 A1A6H 2101 B 1 HETATM 31 C C37 A1A6H . . . R 11 7.467 -45.968 -18.632 1 63.66 ? C37 A1A6H 2101 B 1 HETATM 32 F F08 A1A6H . . . R 11 6.289 -49.911 -15.223 1 60.26 ? F08 A1A6H 2101 B 1 HETATM 33 N N28 A1A6H . . . R 11 14.856 -46.201 -23.926 1 66.86 ? N28 A1A6H 2101 B 1 HETATM 34 N N36 A1A6H . . . R 11 16.111 -45.025 -25.658 1 68.92 ? N36 A1A6H 2101 B 1 HETATM 35 O O01 A1A6H . . . R 11 6.41 -44.445 -14.937 1 54.37 -1 O01 A1A6H 2101 B 1 HETATM 36 O O03 A1A6H . . . R 11 4.345 -44.427 -15.327 1 56.76 ? O03 A1A6H 2101 B 1 HETATM 37 O O22 A1A6H . . . R 11 9.69 -45.837 -19.52 1 62.87 ? O22 A1A6H 2101 B 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 37 #