data_9D11 # _model_server_result.job_id JYkpNJsoInARGqHyQV9cyw _model_server_result.datetime_utc '2025-01-15 17:07:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9d11 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1501}' # _entry.id 9D11 # _exptl.entry_id 9D11 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9D11 _cell.length_a 60.86 _cell.length_b 60.86 _cell.length_c 89.05 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9D11 _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,F,G,H,I,P 1 1 B,J,K,L,Q 2 1 C,M,N,O,R 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 J N N ? 2 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 72 A HIS 1441 1_555 D ZN ZN . A ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc2 A NE2 HIS 89 A HIS 1458 1_555 D ZN ZN . A ZN 1501 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc3 D ZN ZN . A ZN 1501 1_555 G OXT ACT . A ACT 1504 3_554 ? ? ? ? ? ? ? ? ? ? ? ? 1.895 ? metalc ? metalc4 D ZN ZN . A ZN 1501 1_555 P O HOH . A HOH 1677 3_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc5 B NE2 HIS 72 B HIS 1441 1_555 J ZN ZN . B ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc6 B NE2 HIS 89 B HIS 1458 1_555 J ZN ZN . B ZN 1501 2_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc7 J ZN ZN . B ZN 1501 1_555 L O ACT . B ACT 1503 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc8 J ZN ZN . B ZN 1501 1_555 L OXT ACT . B ACT 1503 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc9 J ZN ZN . B ZN 1501 1_555 Q O HOH . B HOH 1608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc10 J ZN ZN . B ZN 1501 1_555 Q O HOH . B HOH 1619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.837 ? metalc ? metalc11 C NE2 HIS 72 C HIS 1441 1_555 M ZN ZN . C ZN 1501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? metalc ? metalc12 C NE2 HIS 89 C HIS 1458 1_555 M ZN ZN . C ZN 1501 2_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc13 M ZN ZN . C ZN 1501 1_555 O O ACT . C ACT 1503 3_444 ? ? ? ? ? ? ? ? ? ? ? ? 1.884 ? metalc ? metalc14 M ZN ZN . C ZN 1501 1_555 R O HOH . C HOH 1661 3_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 9D11 _atom_sites.fract_transf_matrix[1][1] 0.016431 _atom_sites.fract_transf_matrix[1][2] 0.009487 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018973 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01123 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZN A 1 1501 1501 ZN ZN . E 3 A1A1O A 1 1502 1502 A1A1O 074 . F 4 EDO A 1 1503 1503 EDO EDO . G 5 ACT A 1 1504 1504 ACT ACT . H 4 EDO A 1 1505 1505 EDO EDO . I 4 EDO A 1 1506 1506 EDO EDO . J 2 ZN B 1 1501 1501 ZN ZN . K 3 A1A1O B 1 1502 1502 A1A1O 074 . L 5 ACT B 1 1503 1503 ACT ACT . M 2 ZN C 1 1501 1501 ZN ZN . N 3 A1A1O C 1 1502 1502 A1A1O 074 . O 5 ACT C 1 1503 1503 ACT ACT . P 6 HOH A 1 1601 198 HOH HOH . P 6 HOH A 2 1602 36 HOH HOH . P 6 HOH A 3 1603 214 HOH HOH . P 6 HOH A 4 1604 29 HOH HOH . P 6 HOH A 5 1605 163 HOH HOH . P 6 HOH A 6 1606 192 HOH HOH . P 6 HOH A 7 1607 136 HOH HOH . P 6 HOH A 8 1608 74 HOH HOH . P 6 HOH A 9 1609 175 HOH HOH . P 6 HOH A 10 1610 32 HOH HOH . P 6 HOH A 11 1611 96 HOH HOH . P 6 HOH A 12 1612 59 HOH HOH . P 6 HOH A 13 1613 212 HOH HOH . P 6 HOH A 14 1614 34 HOH HOH . P 6 HOH A 15 1615 28 HOH HOH . P 6 HOH A 16 1616 26 HOH HOH . P 6 HOH A 17 1617 9 HOH HOH . P 6 HOH A 18 1618 5 HOH HOH . P 6 HOH A 19 1619 4 HOH HOH . P 6 HOH A 20 1620 47 HOH HOH . P 6 HOH A 21 1621 45 HOH HOH . P 6 HOH A 22 1622 94 HOH HOH . P 6 HOH A 23 1623 149 HOH HOH . P 6 HOH A 24 1624 22 HOH HOH . P 6 HOH A 25 1625 42 HOH HOH . P 6 HOH A 26 1626 125 HOH HOH . P 6 HOH A 27 1627 55 HOH HOH . P 6 HOH A 28 1628 41 HOH HOH . P 6 HOH A 29 1629 25 HOH HOH . P 6 HOH A 30 1630 103 HOH HOH . P 6 HOH A 31 1631 21 HOH HOH . P 6 HOH A 32 1632 123 HOH HOH . P 6 HOH A 33 1633 3 HOH HOH . P 6 HOH A 34 1634 89 HOH HOH . P 6 HOH A 35 1635 210 HOH HOH . P 6 HOH A 36 1636 172 HOH HOH . P 6 HOH A 37 1637 139 HOH HOH . P 6 HOH A 38 1638 1 HOH HOH . P 6 HOH A 39 1639 23 HOH HOH . P 6 HOH A 40 1640 132 HOH HOH . P 6 HOH A 41 1641 102 HOH HOH . P 6 HOH A 42 1642 155 HOH HOH . P 6 HOH A 43 1643 166 HOH HOH . P 6 HOH A 44 1644 57 HOH HOH . P 6 HOH A 45 1645 147 HOH HOH . P 6 HOH A 46 1646 24 HOH HOH . P 6 HOH A 47 1647 35 HOH HOH . P 6 HOH A 48 1648 82 HOH HOH . P 6 HOH A 49 1649 135 HOH HOH . P 6 HOH A 50 1650 185 HOH HOH . P 6 HOH A 51 1651 154 HOH HOH . P 6 HOH A 52 1652 11 HOH HOH . P 6 HOH A 53 1653 116 HOH HOH . P 6 HOH A 54 1654 72 HOH HOH . P 6 HOH A 55 1655 49 HOH HOH . P 6 HOH A 56 1656 171 HOH HOH . P 6 HOH A 57 1657 100 HOH HOH . P 6 HOH A 58 1658 127 HOH HOH . P 6 HOH A 59 1659 133 HOH HOH . P 6 HOH A 60 1660 170 HOH HOH . P 6 HOH A 61 1661 75 HOH HOH . P 6 HOH A 62 1662 27 HOH HOH . P 6 HOH A 63 1663 140 HOH HOH . P 6 HOH A 64 1664 160 HOH HOH . P 6 HOH A 65 1665 141 HOH HOH . P 6 HOH A 66 1666 143 HOH HOH . P 6 HOH A 67 1667 68 HOH HOH . P 6 HOH A 68 1668 216 HOH HOH . P 6 HOH A 69 1669 137 HOH HOH . P 6 HOH A 70 1670 126 HOH HOH . P 6 HOH A 71 1671 113 HOH HOH . P 6 HOH A 72 1672 54 HOH HOH . P 6 HOH A 73 1673 217 HOH HOH . P 6 HOH A 74 1674 215 HOH HOH . P 6 HOH A 75 1675 97 HOH HOH . P 6 HOH A 76 1676 44 HOH HOH . P 6 HOH A 77 1677 194 HOH HOH . P 6 HOH A 78 1678 81 HOH HOH . P 6 HOH A 79 1679 167 HOH HOH . P 6 HOH A 80 1680 203 HOH HOH . P 6 HOH A 81 1681 204 HOH HOH . P 6 HOH A 82 1682 122 HOH HOH . P 6 HOH A 83 1683 199 HOH HOH . Q 6 HOH B 1 1601 201 HOH HOH . Q 6 HOH B 2 1602 66 HOH HOH . Q 6 HOH B 3 1603 206 HOH HOH . Q 6 HOH B 4 1604 111 HOH HOH . Q 6 HOH B 5 1605 53 HOH HOH . Q 6 HOH B 6 1606 8 HOH HOH . Q 6 HOH B 7 1607 129 HOH HOH . Q 6 HOH B 8 1608 18 HOH HOH . Q 6 HOH B 9 1609 209 HOH HOH . Q 6 HOH B 10 1610 16 HOH HOH . Q 6 HOH B 11 1611 10 HOH HOH . Q 6 HOH B 12 1612 43 HOH HOH . Q 6 HOH B 13 1613 110 HOH HOH . Q 6 HOH B 14 1614 19 HOH HOH . Q 6 HOH B 15 1615 46 HOH HOH . Q 6 HOH B 16 1616 86 HOH HOH . Q 6 HOH B 17 1617 121 HOH HOH . Q 6 HOH B 18 1618 15 HOH HOH . Q 6 HOH B 19 1619 195 HOH HOH . Q 6 HOH B 20 1620 84 HOH HOH . Q 6 HOH B 21 1621 7 HOH HOH . Q 6 HOH B 22 1622 48 HOH HOH . Q 6 HOH B 23 1623 77 HOH HOH . Q 6 HOH B 24 1624 152 HOH HOH . Q 6 HOH B 25 1625 40 HOH HOH . Q 6 HOH B 26 1626 61 HOH HOH . Q 6 HOH B 27 1627 173 HOH HOH . Q 6 HOH B 28 1628 38 HOH HOH . Q 6 HOH B 29 1629 108 HOH HOH . Q 6 HOH B 30 1630 211 HOH HOH . Q 6 HOH B 31 1631 153 HOH HOH . Q 6 HOH B 32 1632 12 HOH HOH . Q 6 HOH B 33 1633 2 HOH HOH . Q 6 HOH B 34 1634 104 HOH HOH . Q 6 HOH B 35 1635 51 HOH HOH . Q 6 HOH B 36 1636 186 HOH HOH . Q 6 HOH B 37 1637 52 HOH HOH . Q 6 HOH B 38 1638 83 HOH HOH . Q 6 HOH B 39 1639 98 HOH HOH . Q 6 HOH B 40 1640 58 HOH HOH . Q 6 HOH B 41 1641 187 HOH HOH . Q 6 HOH B 42 1642 164 HOH HOH . Q 6 HOH B 43 1643 79 HOH HOH . Q 6 HOH B 44 1644 144 HOH HOH . Q 6 HOH B 45 1645 93 HOH HOH . Q 6 HOH B 46 1646 176 HOH HOH . Q 6 HOH B 47 1647 14 HOH HOH . Q 6 HOH B 48 1648 107 HOH HOH . Q 6 HOH B 49 1649 64 HOH HOH . Q 6 HOH B 50 1650 178 HOH HOH . Q 6 HOH B 51 1651 120 HOH HOH . Q 6 HOH B 52 1652 33 HOH HOH . Q 6 HOH B 53 1653 112 HOH HOH . Q 6 HOH B 54 1654 158 HOH HOH . Q 6 HOH B 55 1655 169 HOH HOH . Q 6 HOH B 56 1656 183 HOH HOH . Q 6 HOH B 57 1657 91 HOH HOH . Q 6 HOH B 58 1658 161 HOH HOH . Q 6 HOH B 59 1659 150 HOH HOH . Q 6 HOH B 60 1660 118 HOH HOH . Q 6 HOH B 61 1661 117 HOH HOH . Q 6 HOH B 62 1662 197 HOH HOH . Q 6 HOH B 63 1663 196 HOH HOH . Q 6 HOH B 64 1664 213 HOH HOH . Q 6 HOH B 65 1665 207 HOH HOH . Q 6 HOH B 66 1666 202 HOH HOH . R 6 HOH C 1 1601 145 HOH HOH . R 6 HOH C 2 1602 168 HOH HOH . R 6 HOH C 3 1603 13 HOH HOH . R 6 HOH C 4 1604 95 HOH HOH . R 6 HOH C 5 1605 88 HOH HOH . R 6 HOH C 6 1606 17 HOH HOH . R 6 HOH C 7 1607 180 HOH HOH . R 6 HOH C 8 1608 37 HOH HOH . R 6 HOH C 9 1609 134 HOH HOH . R 6 HOH C 10 1610 80 HOH HOH . R 6 HOH C 11 1611 50 HOH HOH . R 6 HOH C 12 1612 78 HOH HOH . R 6 HOH C 13 1613 131 HOH HOH . R 6 HOH C 14 1614 157 HOH HOH . R 6 HOH C 15 1615 56 HOH HOH . R 6 HOH C 16 1616 128 HOH HOH . R 6 HOH C 17 1617 71 HOH HOH . R 6 HOH C 18 1618 189 HOH HOH . R 6 HOH C 19 1619 62 HOH HOH . R 6 HOH C 20 1620 20 HOH HOH . R 6 HOH C 21 1621 69 HOH HOH . R 6 HOH C 22 1622 92 HOH HOH . R 6 HOH C 23 1623 31 HOH HOH . R 6 HOH C 24 1624 39 HOH HOH . R 6 HOH C 25 1625 162 HOH HOH . R 6 HOH C 26 1626 165 HOH HOH . R 6 HOH C 27 1627 159 HOH HOH . R 6 HOH C 28 1628 6 HOH HOH . R 6 HOH C 29 1629 156 HOH HOH . R 6 HOH C 30 1630 106 HOH HOH . R 6 HOH C 31 1631 63 HOH HOH . R 6 HOH C 32 1632 70 HOH HOH . R 6 HOH C 33 1633 193 HOH HOH . R 6 HOH C 34 1634 191 HOH HOH . R 6 HOH C 35 1635 30 HOH HOH . R 6 HOH C 36 1636 105 HOH HOH . R 6 HOH C 37 1637 174 HOH HOH . R 6 HOH C 38 1638 177 HOH HOH . R 6 HOH C 39 1639 138 HOH HOH . R 6 HOH C 40 1640 190 HOH HOH . R 6 HOH C 41 1641 182 HOH HOH . R 6 HOH C 42 1642 99 HOH HOH . R 6 HOH C 43 1643 146 HOH HOH . R 6 HOH C 44 1644 65 HOH HOH . R 6 HOH C 45 1645 151 HOH HOH . R 6 HOH C 46 1646 60 HOH HOH . R 6 HOH C 47 1647 148 HOH HOH . R 6 HOH C 48 1648 90 HOH HOH . R 6 HOH C 49 1649 188 HOH HOH . R 6 HOH C 50 1650 73 HOH HOH . R 6 HOH C 51 1651 87 HOH HOH . R 6 HOH C 52 1652 179 HOH HOH . R 6 HOH C 53 1653 124 HOH HOH . R 6 HOH C 54 1654 76 HOH HOH . R 6 HOH C 55 1655 181 HOH HOH . R 6 HOH C 56 1656 67 HOH HOH . R 6 HOH C 57 1657 114 HOH HOH . R 6 HOH C 58 1658 85 HOH HOH . R 6 HOH C 59 1659 119 HOH HOH . R 6 HOH C 60 1660 115 HOH HOH . R 6 HOH C 61 1661 205 HOH HOH . R 6 HOH C 62 1662 101 HOH HOH . R 6 HOH C 63 1663 130 HOH HOH . R 6 HOH C 64 1664 142 HOH HOH . R 6 HOH C 65 1665 184 HOH HOH . R 6 HOH C 66 1666 208 HOH HOH . R 6 HOH C 67 1667 109 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 5.481 _atom_site.Cartn_y -3.279 _atom_site.Cartn_z -28.709 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 12.54 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 91 _model_server_stats.parse_time_ms 90 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 445 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #