data_9D2K
#
_model_server_result.job_id            F-QJDX8gmy5nn4S4Ov4xfg 
_model_server_result.datetime_utc      '2025-10-01 06:16:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9d2k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"V","auth_seq_id":408}' 
#
_entry.id    9D2K 
#
_exptl.entry_id    9D2K 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              35.453 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHLORIDE ION' 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9D2K 
_cell.length_a            112.983 
_cell.length_b            112.983 
_cell.length_c            223.834 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9D2K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    'P 4abw 2nw' 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,N,Y 1 1 
B,O,P,Q,R,S,T,U,V,W,X,Z 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 J N N 
? 5 K N N 
? 5 L N N 
? 5 M N N 
? 5 N N N 
? 5 U N N 
? 5 V N N 
? 5 W N N 
? 5 X N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 114 A CYS 111 1_555 C C37 A1A6J . A A1A6J 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? 
covale ? covale2 B SG CYS 114 B CYS 111 1_555 O C37 A1A6J . B A1A6J 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.825 ? 
metalc ? metalc1 A OD1 ASP 65 A ASP 62 1_555 P ZN ZN . B ZN 402 6_454 ? ? ? ? ? ? ? ? ? ? ? ? 1.912 ? 
metalc ? metalc2 A ND1 HIS 76 A HIS 73 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc3 A ND1 HIS 92 A HIS 89 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? 
metalc ? metalc4 A SG CYS 192 A CYS 189 1_555 I ZN ZN . A ZN 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc5 A SG CYS 227 A CYS 224 1_555 I ZN ZN . A ZN 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc6 A SG CYS 229 A CYS 226 1_555 I ZN ZN . A ZN 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc7 A ND1 HIS 258 A HIS 255 1_555 G ZN ZN . A ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
metalc ? metalc8 A SG CYS 273 A CYS 270 1_555 F ZN ZN . A ZN 404 8_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc9 A NE2 HIS 275 A HIS 272 1_555 H ZN ZN . A ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc10 A OD1 ASP 289 A ASP 286 1_555 H ZN ZN . A ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? 
metalc ? metalc11 E ZN ZN . A ZN 403 6_554 B OD1 ASP 65 B ASP 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.952 ? 
metalc ? metalc12 B ND1 HIS 76 B HIS 73 1_555 P ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? 
metalc ? metalc13 B ND1 HIS 92 B HIS 89 1_555 Q ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc14 B OD2 ASP 111 B ASP 108 1_555 Q ZN ZN . B ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? 
metalc ? metalc15 B NE2 HIS 178 B HIS 175 1_555 S ZN ZN . B ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? 
metalc ? metalc16 B ND1 HIS 258 B HIS 255 1_555 R ZN ZN . B ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
metalc ? metalc17 B NE2 HIS 275 B HIS 272 1_555 T ZN ZN . B ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
#
_chem_comp.formula           'Cl -1' 
_chem_comp.formula_weight    35.453 
_chem_comp.id                CL 
_chem_comp.mon_nstd_flag     ? 
_chem_comp.name              'CHLORIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     9D2K 
_atom_sites.fract_transf_matrix[1][1]    0.008851 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008851 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004468 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 A1A6J A 1 401 401 A1A6J I34 ? 
D 3 DTT A 1 402 402 DTT DTT ? 
E 4 ZN A 1 403 2 ZN ZN ? 
F 4 ZN A 1 404 4 ZN ZN ? 
G 4 ZN A 1 405 11 ZN ZN ? 
H 4 ZN A 1 406 16 ZN ZN ? 
I 4 ZN A 1 407 19 ZN ZN ? 
J 5 CL A 1 408 1 CL CL ? 
K 5 CL A 1 409 2 CL CL ? 
L 5 CL A 1 410 3 CL CL ? 
M 5 CL A 1 411 7 CL CL ? 
N 5 CL A 1 412 10 CL CL ? 
O 2 A1A6J B 1 401 401 A1A6J I34 ? 
P 4 ZN B 1 402 5 ZN ZN ? 
Q 4 ZN B 1 403 12 ZN ZN ? 
R 4 ZN B 1 404 13 ZN ZN ? 
S 4 ZN B 1 405 15 ZN ZN ? 
T 4 ZN B 1 406 18 ZN ZN ? 
U 5 CL B 1 407 4 CL CL ? 
V 5 CL B 1 408 5 CL CL ? 
W 5 CL B 1 409 8 CL CL ? 
X 5 CL B 1 410 9 CL CL ? 
Y 6 HOH A 1 501 75 HOH HOH ? 
Y 6 HOH A 2 502 31 HOH HOH ? 
Y 6 HOH A 3 503 76 HOH HOH ? 
Y 6 HOH A 4 504 9 HOH HOH ? 
Y 6 HOH A 5 505 100 HOH HOH ? 
Y 6 HOH A 6 506 58 HOH HOH ? 
Y 6 HOH A 7 507 111 HOH HOH ? 
Y 6 HOH A 8 508 81 HOH HOH ? 
Y 6 HOH A 9 509 77 HOH HOH ? 
Y 6 HOH A 10 510 7 HOH HOH ? 
Y 6 HOH A 11 511 40 HOH HOH ? 
Y 6 HOH A 12 512 51 HOH HOH ? 
Y 6 HOH A 13 513 11 HOH HOH ? 
Y 6 HOH A 14 514 2 HOH HOH ? 
Y 6 HOH A 15 515 10 HOH HOH ? 
Y 6 HOH A 16 516 8 HOH HOH ? 
Y 6 HOH A 17 517 15 HOH HOH ? 
Y 6 HOH A 18 518 99 HOH HOH ? 
Y 6 HOH A 19 519 5 HOH HOH ? 
Y 6 HOH A 20 520 16 HOH HOH ? 
Y 6 HOH A 21 521 30 HOH HOH ? 
Y 6 HOH A 22 522 52 HOH HOH ? 
Y 6 HOH A 23 523 88 HOH HOH ? 
Y 6 HOH A 24 524 107 HOH HOH ? 
Y 6 HOH A 25 525 23 HOH HOH ? 
Y 6 HOH A 26 526 1 HOH HOH ? 
Y 6 HOH A 27 527 91 HOH HOH ? 
Y 6 HOH A 28 528 48 HOH HOH ? 
Y 6 HOH A 29 529 87 HOH HOH ? 
Y 6 HOH A 30 530 19 HOH HOH ? 
Y 6 HOH A 31 531 90 HOH HOH ? 
Y 6 HOH A 32 532 6 HOH HOH ? 
Y 6 HOH A 33 533 82 HOH HOH ? 
Y 6 HOH A 34 534 26 HOH HOH ? 
Y 6 HOH A 35 535 80 HOH HOH ? 
Y 6 HOH A 36 536 92 HOH HOH ? 
Y 6 HOH A 37 537 84 HOH HOH ? 
Y 6 HOH A 38 538 79 HOH HOH ? 
Y 6 HOH A 39 539 44 HOH HOH ? 
Y 6 HOH A 40 540 14 HOH HOH ? 
Y 6 HOH A 41 541 20 HOH HOH ? 
Y 6 HOH A 42 542 13 HOH HOH ? 
Y 6 HOH A 43 543 12 HOH HOH ? 
Y 6 HOH A 44 544 108 HOH HOH ? 
Y 6 HOH A 45 545 43 HOH HOH ? 
Y 6 HOH A 46 546 55 HOH HOH ? 
Y 6 HOH A 47 547 35 HOH HOH ? 
Y 6 HOH A 48 548 86 HOH HOH ? 
Y 6 HOH A 49 549 50 HOH HOH ? 
Y 6 HOH A 50 550 85 HOH HOH ? 
Y 6 HOH A 51 551 49 HOH HOH ? 
Y 6 HOH A 52 552 45 HOH HOH ? 
Y 6 HOH A 53 553 17 HOH HOH ? 
Y 6 HOH A 54 554 42 HOH HOH ? 
Y 6 HOH A 55 555 24 HOH HOH ? 
Y 6 HOH A 56 556 41 HOH HOH ? 
Y 6 HOH A 57 557 95 HOH HOH ? 
Y 6 HOH A 58 558 72 HOH HOH ? 
Y 6 HOH A 59 559 39 HOH HOH ? 
Z 6 HOH B 1 501 21 HOH HOH ? 
Z 6 HOH B 2 502 32 HOH HOH ? 
Z 6 HOH B 3 503 78 HOH HOH ? 
Z 6 HOH B 4 504 29 HOH HOH ? 
Z 6 HOH B 5 505 46 HOH HOH ? 
Z 6 HOH B 6 506 4 HOH HOH ? 
Z 6 HOH B 7 507 110 HOH HOH ? 
Z 6 HOH B 8 508 96 HOH HOH ? 
Z 6 HOH B 9 509 25 HOH HOH ? 
Z 6 HOH B 10 510 18 HOH HOH ? 
Z 6 HOH B 11 511 27 HOH HOH ? 
Z 6 HOH B 12 512 73 HOH HOH ? 
Z 6 HOH B 13 513 54 HOH HOH ? 
Z 6 HOH B 14 514 38 HOH HOH ? 
Z 6 HOH B 15 515 37 HOH HOH ? 
Z 6 HOH B 16 516 57 HOH HOH ? 
Z 6 HOH B 17 517 94 HOH HOH ? 
Z 6 HOH B 18 518 89 HOH HOH ? 
Z 6 HOH B 19 519 33 HOH HOH ? 
Z 6 HOH B 20 520 71 HOH HOH ? 
Z 6 HOH B 21 521 83 HOH HOH ? 
Z 6 HOH B 22 522 47 HOH HOH ? 
Z 6 HOH B 23 523 70 HOH HOH ? 
Z 6 HOH B 24 524 69 HOH HOH ? 
Z 6 HOH B 25 525 97 HOH HOH ? 
Z 6 HOH B 26 526 3 HOH HOH ? 
Z 6 HOH B 27 527 53 HOH HOH ? 
Z 6 HOH B 28 528 109 HOH HOH ? 
Z 6 HOH B 29 529 56 HOH HOH ? 
Z 6 HOH B 30 530 66 HOH HOH ? 
Z 6 HOH B 31 531 68 HOH HOH ? 
Z 6 HOH B 32 532 60 HOH HOH ? 
Z 6 HOH B 33 533 59 HOH HOH ? 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CL 
_atom_site.label_atom_id         CL 
_atom_site.label_comp_id         CL 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         V 
_atom_site.label_entity_id       5 
_atom_site.Cartn_x               18.626 
_atom_site.Cartn_y               27.007 
_atom_site.Cartn_z               -18.71 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        57.82 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CL 
_atom_site.auth_comp_id          CL 
_atom_site.auth_seq_id           408 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              33 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           169 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#