data_9D2O # _model_server_result.job_id 7nanAHlqqrUIYBwL73PBmg _model_server_result.datetime_utc '2025-08-24 14:07:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9d2o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 9D2O # _exptl.entry_id 9D2O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 441.907 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(4-{2-[4-(6-chloropyridazin-3-yl)piperazin-1-yl]-2-oxoethyl}-3-fluorophenyl)ethanesulfonamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9D2O _cell.length_a 97.544 _cell.length_b 97.544 _cell.length_c 69.25 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9D2O _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_554 x-y,-y,-z-1/3 1 0 0 0 -1 0 0 0 -1 0 0 -23.083333 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D O3G ANP . A ANP 403 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc2 D O2B ANP . A ANP 403 1_555 E MG MG . A MG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc3 E MG MG . A MG 404 1_555 H O HOH . A HOH 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc4 E MG MG . A MG 404 1_555 H O HOH . A HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc5 E MG MG . A MG 404 1_555 H O HOH . A HOH 584 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc6 E MG MG . A MG 404 1_555 H O HOH . A HOH 596 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? # _chem_comp.formula 'C18 H21 Cl F N5 O3 S' _chem_comp.formula_weight 441.907 _chem_comp.id A1A1N _chem_comp.mon_nstd_flag . _chem_comp.name N-(4-{2-[4-(6-chloropyridazin-3-yl)piperazin-1-yl]-2-oxoethyl}-3-fluorophenyl)ethanesulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C02 O01 A1A1N doub 1 n n C04 N03 A1A1N sing 2 n n C05 C04 A1A1N sing 3 n n N06 C05 A1A1N sing 4 n n N08 C07 A1A1N doub 5 n y N09 N08 A1A1N sing 6 n y C10 N09 A1A1N doub 7 n y CL11 C10 A1A1N sing 8 n n C12 C10 A1A1N sing 9 n y C13 C12 A1A1N doub 10 n y C07 N06 A1A1N sing 11 n n C14 N06 A1A1N sing 12 n n C15 C14 A1A1N sing 13 n n N03 C02 A1A1N sing 14 n n C16 C02 A1A1N sing 15 n n C17 C16 A1A1N sing 16 n n C18 C17 A1A1N doub 17 n y F19 C18 A1A1N sing 18 n n C20 C18 A1A1N sing 19 n y C21 C20 A1A1N doub 20 n y S23 N22 A1A1N sing 21 n n C25 C24 A1A1N sing 22 n n C24 S23 A1A1N sing 23 n n O26 S23 A1A1N doub 24 n n O27 S23 A1A1N doub 25 n n N22 C21 A1A1N sing 26 n n C28 C21 A1A1N sing 27 n y C29 C28 A1A1N doub 28 n y N03 C15 A1A1N sing 29 n n C07 C13 A1A1N sing 30 n y C17 C29 A1A1N sing 31 n y C04 H041 A1A1N sing 32 n n C04 H042 A1A1N sing 33 n n C05 H051 A1A1N sing 34 n n C05 H052 A1A1N sing 35 n n C12 H121 A1A1N sing 36 n n C13 H131 A1A1N sing 37 n n C14 H141 A1A1N sing 38 n n C14 H142 A1A1N sing 39 n n C15 H151 A1A1N sing 40 n n C15 H152 A1A1N sing 41 n n C16 H161 A1A1N sing 42 n n C16 H162 A1A1N sing 43 n n C20 H201 A1A1N sing 44 n n C24 H241 A1A1N sing 45 n n C24 H242 A1A1N sing 46 n n C25 H251 A1A1N sing 47 n n C25 H252 A1A1N sing 48 n n C25 H253 A1A1N sing 49 n n C28 H281 A1A1N sing 50 n n C29 H291 A1A1N sing 51 n n N22 H221 A1A1N sing 52 n n # _atom_sites.entry_id 9D2O _atom_sites.fract_transf_matrix[1][1] 0.010252 _atom_sites.fract_transf_matrix[1][2] 0.005919 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011838 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01444 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1A1N A 1 401 401 A1A1N YZ2 . C 3 ACY A 1 402 402 ACY ACT . D 4 ANP A 1 403 403 ANP ANP . E 5 MG A 1 404 1 MG MG . F 6 EDO A 1 405 1 EDO EDO . G 6 EDO A 1 406 2 EDO EDO . H 7 HOH A 1 501 133 HOH HOH . H 7 HOH A 2 502 125 HOH HOH . H 7 HOH A 3 503 147 HOH HOH . H 7 HOH A 4 504 53 HOH HOH . H 7 HOH A 5 505 58 HOH HOH . H 7 HOH A 6 506 52 HOH HOH . H 7 HOH A 7 507 77 HOH HOH . H 7 HOH A 8 508 86 HOH HOH . H 7 HOH A 9 509 123 HOH HOH . H 7 HOH A 10 510 90 HOH HOH . H 7 HOH A 11 511 79 HOH HOH . H 7 HOH A 12 512 57 HOH HOH . H 7 HOH A 13 513 18 HOH HOH . H 7 HOH A 14 514 56 HOH HOH . H 7 HOH A 15 515 59 HOH HOH . H 7 HOH A 16 516 64 HOH HOH . H 7 HOH A 17 517 45 HOH HOH . H 7 HOH A 18 518 21 HOH HOH . H 7 HOH A 19 519 73 HOH HOH . H 7 HOH A 20 520 41 HOH HOH . H 7 HOH A 21 521 84 HOH HOH . H 7 HOH A 22 522 75 HOH HOH . H 7 HOH A 23 523 95 HOH HOH . H 7 HOH A 24 524 2 HOH HOH . H 7 HOH A 25 525 10 HOH HOH . H 7 HOH A 26 526 36 HOH HOH . H 7 HOH A 27 527 85 HOH HOH . H 7 HOH A 28 528 39 HOH HOH . H 7 HOH A 29 529 112 HOH HOH . H 7 HOH A 30 530 124 HOH HOH . H 7 HOH A 31 531 27 HOH HOH . H 7 HOH A 32 532 12 HOH HOH . H 7 HOH A 33 533 119 HOH HOH . H 7 HOH A 34 534 23 HOH HOH . H 7 HOH A 35 535 78 HOH HOH . H 7 HOH A 36 536 71 HOH HOH . H 7 HOH A 37 537 116 HOH HOH . H 7 HOH A 38 538 142 HOH HOH . H 7 HOH A 39 539 1 HOH HOH . H 7 HOH A 40 540 103 HOH HOH . H 7 HOH A 41 541 20 HOH HOH . H 7 HOH A 42 542 143 HOH HOH . H 7 HOH A 43 543 49 HOH HOH . H 7 HOH A 44 544 94 HOH HOH . H 7 HOH A 45 545 121 HOH HOH . H 7 HOH A 46 546 51 HOH HOH . H 7 HOH A 47 547 61 HOH HOH . H 7 HOH A 48 548 102 HOH HOH . H 7 HOH A 49 549 6 HOH HOH . H 7 HOH A 50 550 115 HOH HOH . H 7 HOH A 51 551 140 HOH HOH . H 7 HOH A 52 552 14 HOH HOH . H 7 HOH A 53 553 72 HOH HOH . H 7 HOH A 54 554 17 HOH HOH . H 7 HOH A 55 555 65 HOH HOH . H 7 HOH A 56 556 16 HOH HOH . H 7 HOH A 57 557 134 HOH HOH . H 7 HOH A 58 558 35 HOH HOH . H 7 HOH A 59 559 5 HOH HOH . H 7 HOH A 60 560 113 HOH HOH . H 7 HOH A 61 561 29 HOH HOH . H 7 HOH A 62 562 93 HOH HOH . H 7 HOH A 63 563 99 HOH HOH . H 7 HOH A 64 564 137 HOH HOH . H 7 HOH A 65 565 9 HOH HOH . H 7 HOH A 66 566 129 HOH HOH . H 7 HOH A 67 567 127 HOH HOH . H 7 HOH A 68 568 67 HOH HOH . H 7 HOH A 69 569 60 HOH HOH . H 7 HOH A 70 570 48 HOH HOH . H 7 HOH A 71 571 38 HOH HOH . H 7 HOH A 72 572 13 HOH HOH . H 7 HOH A 73 573 37 HOH HOH . H 7 HOH A 74 574 80 HOH HOH . H 7 HOH A 75 575 122 HOH HOH . H 7 HOH A 76 576 126 HOH HOH . H 7 HOH A 77 577 130 HOH HOH . H 7 HOH A 78 578 43 HOH HOH . H 7 HOH A 79 579 92 HOH HOH . H 7 HOH A 80 580 118 HOH HOH . H 7 HOH A 81 581 33 HOH HOH . H 7 HOH A 82 582 44 HOH HOH . H 7 HOH A 83 583 100 HOH HOH . H 7 HOH A 84 584 4 HOH HOH . H 7 HOH A 85 585 28 HOH HOH . H 7 HOH A 86 586 145 HOH HOH . H 7 HOH A 87 587 31 HOH HOH . H 7 HOH A 88 588 34 HOH HOH . H 7 HOH A 89 589 19 HOH HOH . H 7 HOH A 90 590 26 HOH HOH . H 7 HOH A 91 591 117 HOH HOH . H 7 HOH A 92 592 136 HOH HOH . H 7 HOH A 93 593 114 HOH HOH . H 7 HOH A 94 594 32 HOH HOH . H 7 HOH A 95 595 63 HOH HOH . H 7 HOH A 96 596 3 HOH HOH . H 7 HOH A 97 597 55 HOH HOH . H 7 HOH A 98 598 135 HOH HOH . H 7 HOH A 99 599 111 HOH HOH . H 7 HOH A 100 600 128 HOH HOH . H 7 HOH A 101 601 15 HOH HOH . H 7 HOH A 102 602 110 HOH HOH . H 7 HOH A 103 603 87 HOH HOH . H 7 HOH A 104 604 68 HOH HOH . H 7 HOH A 105 605 54 HOH HOH . H 7 HOH A 106 606 40 HOH HOH . H 7 HOH A 107 607 131 HOH HOH . H 7 HOH A 108 608 120 HOH HOH . H 7 HOH A 109 609 108 HOH HOH . H 7 HOH A 110 610 91 HOH HOH . H 7 HOH A 111 611 107 HOH HOH . H 7 HOH A 112 612 24 HOH HOH . H 7 HOH A 113 613 8 HOH HOH . H 7 HOH A 114 614 83 HOH HOH . H 7 HOH A 115 615 105 HOH HOH . H 7 HOH A 116 616 25 HOH HOH . H 7 HOH A 117 617 76 HOH HOH . H 7 HOH A 118 618 141 HOH HOH . H 7 HOH A 119 619 132 HOH HOH . H 7 HOH A 120 620 7 HOH HOH . H 7 HOH A 121 621 148 HOH HOH . H 7 HOH A 122 622 30 HOH HOH . H 7 HOH A 123 623 98 HOH HOH . H 7 HOH A 124 624 106 HOH HOH . H 7 HOH A 125 625 109 HOH HOH . H 7 HOH A 126 626 62 HOH HOH . H 7 HOH A 127 627 74 HOH HOH . H 7 HOH A 128 628 11 HOH HOH . H 7 HOH A 129 629 101 HOH HOH . H 7 HOH A 130 630 69 HOH HOH . H 7 HOH A 131 631 144 HOH HOH . H 7 HOH A 132 632 22 HOH HOH . H 7 HOH A 133 633 146 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 A1A1N . . . B 2 -34.064 -10.78 -11.036 1 27.71 ? C02 A1A1N 401 A 1 HETATM 2 C C04 A1A1N . . . B 2 -35.686 -10.699 -12.889 1 35.98 ? C04 A1A1N 401 A 1 HETATM 3 C C05 A1A1N . . . B 2 -35.985 -9.363 -13.573 1 35.89 ? C05 A1A1N 401 A 1 HETATM 4 C C07 A1A1N . . . B 2 -35.243 -8.189 -15.719 1 28.16 ? C07 A1A1N 401 A 1 HETATM 5 C C10 A1A1N . . . B 2 -35.944 -6.872 -17.875 1 28.11 ? C10 A1A1N 401 A 1 HETATM 6 C C12 A1A1N . . . B 2 -34.585 -7.188 -17.773 1 26.35 ? C12 A1A1N 401 A 1 HETATM 7 C C13 A1A1N . . . B 2 -34.202 -7.906 -16.609 1 23.09 ? C13 A1A1N 401 A 1 HETATM 8 C C14 A1A1N . . . B 2 -33.503 -9.165 -14.19 1 35.12 ? C14 A1A1N 401 A 1 HETATM 9 C C15 A1A1N . . . B 2 -33.349 -10.428 -13.366 1 41.94 ? C15 A1A1N 401 A 1 HETATM 10 C C16 A1A1N . . . B 2 -32.602 -10.657 -10.682 1 24.47 ? C16 A1A1N 401 A 1 HETATM 11 C C17 A1A1N . . . B 2 -32.215 -11.499 -9.483 1 24.67 ? C17 A1A1N 401 A 1 HETATM 12 C C18 A1A1N . . . B 2 -32.114 -12.882 -9.641 1 25.05 ? C18 A1A1N 401 A 1 HETATM 13 C C20 A1A1N . . . B 2 -31.752 -13.675 -8.55 1 23.02 ? C20 A1A1N 401 A 1 HETATM 14 C C21 A1A1N . . . B 2 -31.497 -13.038 -7.355 1 26.04 ? C21 A1A1N 401 A 1 HETATM 15 C C24 A1A1N . . . B 2 -33.158 -15.755 -6.133 1 40.39 ? C24 A1A1N 401 A 1 HETATM 16 C C25 A1A1N . . . B 2 -33.765 -14.91 -5.028 1 48.35 ? C25 A1A1N 401 A 1 HETATM 17 C C28 A1A1N . . . B 2 -31.621 -11.656 -7.198 1 23.64 ? C28 A1A1N 401 A 1 HETATM 18 C C29 A1A1N . . . B 2 -31.984 -10.873 -8.274 1 24.82 ? C29 A1A1N 401 A 1 HETATM 19 F F19 A1A1N . . . B 2 -32.364 -13.46 -10.845 1 26.81 ? F19 A1A1N 401 A 1 HETATM 20 N N03 A1A1N . . . B 2 -34.375 -10.644 -12.422 1 35.21 ? N03 A1A1N 401 A 1 HETATM 21 N N06 A1A1N . . . B 2 -34.926 -8.937 -14.551 1 32.06 ? N06 A1A1N 401 A 1 HETATM 22 N N08 A1A1N . . . B 2 -36.494 -7.847 -15.896 1 31.11 ? N08 A1A1N 401 A 1 HETATM 23 N N09 A1A1N . . . B 2 -36.851 -7.178 -16.998 1 33.25 ? N09 A1A1N 401 A 1 HETATM 24 N N22 A1A1N . . . B 2 -31.109 -13.79 -6.182 1 31.02 ? N22 A1A1N 401 A 1 HETATM 25 O O01 A1A1N . . . B 2 -34.94 -10.987 -10.267 1 24.98 ? O01 A1A1N 401 A 1 HETATM 26 O O26 A1A1N . . . B 2 -30.838 -15.796 -4.751 1 41.45 ? O26 A1A1N 401 A 1 HETATM 27 O O27 A1A1N . . . B 2 -30.763 -16.224 -7.164 1 38.5 ? O27 A1A1N 401 A 1 HETATM 28 S S23 A1A1N . . . B 2 -31.368 -15.469 -6.075 1 39.16 ? S23 A1A1N 401 A 1 HETATM 29 CL CL11 A1A1N . . . B 2 -36.502 -6.013 -19.313 1 31.41 ? CL11 A1A1N 401 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 42 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 1254 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 29 #