data_9D8E # _model_server_result.job_id 2M2QcabA1iwSXT6Z3z6CXA _model_server_result.datetime_utc '2025-04-02 12:41:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9d8e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":503}' # _entry.id 9D8E # _exptl.entry_id 9D8E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9D8E _cell.length_a 52.684 _cell.length_b 70.753 _cell.length_c 158.56 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9D8E _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,Q 1 1 B,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 344 n n P O2 PO4 sing 345 n n P O3 PO4 sing 346 n n P O4 PO4 sing 347 n n # _atom_sites.entry_id 9D8E _atom_sites.fract_transf_matrix[1][1] 0.018981 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014134 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006307 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 701 701 GOL GOL . D 2 GOL A 1 702 801 GOL GOL . E 3 A1A29 A 1 703 600 A1A29 278 . F 4 PO4 A 1 704 1 PO4 PO4 . G 4 PO4 A 1 705 5 PO4 PO4 . H 4 PO4 A 1 706 6 PO4 PO4 . I 4 PO4 A 1 707 8 PO4 PO4 . J 4 PO4 A 1 708 9 PO4 PO4 . K 3 A1A29 B 1 501 600 A1A29 278 . L 2 GOL B 1 502 701 GOL GOL . M 4 PO4 B 1 503 2 PO4 PO4 . N 4 PO4 B 1 504 3 PO4 PO4 . O 4 PO4 B 1 505 4 PO4 PO4 . P 4 PO4 B 1 506 7 PO4 PO4 . Q 5 HOH A 1 801 493 HOH HOH . Q 5 HOH A 2 802 471 HOH HOH . Q 5 HOH A 3 803 473 HOH HOH . Q 5 HOH A 4 804 1212 HOH HOH . Q 5 HOH A 5 805 1011 HOH HOH . Q 5 HOH A 6 806 313 HOH HOH . Q 5 HOH A 7 807 280 HOH HOH . Q 5 HOH A 8 808 93 HOH HOH . Q 5 HOH A 9 809 469 HOH HOH . Q 5 HOH A 10 810 355 HOH HOH . Q 5 HOH A 11 811 124 HOH HOH . Q 5 HOH A 12 812 168 HOH HOH . Q 5 HOH A 13 813 868 HOH HOH . Q 5 HOH A 14 814 240 HOH HOH . Q 5 HOH A 15 815 67 HOH HOH . Q 5 HOH A 16 816 225 HOH HOH . Q 5 HOH A 17 817 47 HOH HOH . Q 5 HOH A 18 818 62 HOH HOH . Q 5 HOH A 19 819 100 HOH HOH . Q 5 HOH A 20 820 24 HOH HOH . Q 5 HOH A 21 821 95 HOH HOH . Q 5 HOH A 22 822 445 HOH HOH . Q 5 HOH A 23 823 284 HOH HOH . Q 5 HOH A 24 824 527 HOH HOH . Q 5 HOH A 25 825 86 HOH HOH . Q 5 HOH A 26 826 234 HOH HOH . Q 5 HOH A 27 827 452 HOH HOH . Q 5 HOH A 28 828 42 HOH HOH . Q 5 HOH A 29 829 800 HOH HOH . Q 5 HOH A 30 830 289 HOH HOH . Q 5 HOH A 31 831 143 HOH HOH . Q 5 HOH A 32 832 116 HOH HOH . Q 5 HOH A 33 833 65 HOH HOH . Q 5 HOH A 34 834 288 HOH HOH . Q 5 HOH A 35 835 210 HOH HOH . Q 5 HOH A 36 836 279 HOH HOH . Q 5 HOH A 37 837 356 HOH HOH . Q 5 HOH A 38 838 20 HOH HOH . Q 5 HOH A 39 839 16 HOH HOH . Q 5 HOH A 40 840 49 HOH HOH . Q 5 HOH A 41 841 107 HOH HOH . Q 5 HOH A 42 842 48 HOH HOH . Q 5 HOH A 43 843 11 HOH HOH . Q 5 HOH A 44 844 232 HOH HOH . Q 5 HOH A 45 845 707 HOH HOH . Q 5 HOH A 46 846 59 HOH HOH . Q 5 HOH A 47 847 282 HOH HOH . Q 5 HOH A 48 848 79 HOH HOH . Q 5 HOH A 49 849 25 HOH HOH . Q 5 HOH A 50 850 3 HOH HOH . Q 5 HOH A 51 851 64 HOH HOH . Q 5 HOH A 52 852 4 HOH HOH . Q 5 HOH A 53 853 202 HOH HOH . Q 5 HOH A 54 854 229 HOH HOH . Q 5 HOH A 55 855 70 HOH HOH . Q 5 HOH A 56 856 19 HOH HOH . Q 5 HOH A 57 857 156 HOH HOH . Q 5 HOH A 58 858 120 HOH HOH . Q 5 HOH A 59 859 22 HOH HOH . Q 5 HOH A 60 860 46 HOH HOH . Q 5 HOH A 61 861 60 HOH HOH . Q 5 HOH A 62 862 10 HOH HOH . Q 5 HOH A 63 863 105 HOH HOH . Q 5 HOH A 64 864 13 HOH HOH . Q 5 HOH A 65 865 75 HOH HOH . Q 5 HOH A 66 866 115 HOH HOH . Q 5 HOH A 67 867 17 HOH HOH . Q 5 HOH A 68 868 53 HOH HOH . Q 5 HOH A 69 869 352 HOH HOH . Q 5 HOH A 70 870 63 HOH HOH . Q 5 HOH A 71 871 85 HOH HOH . Q 5 HOH A 72 872 90 HOH HOH . Q 5 HOH A 73 873 433 HOH HOH . Q 5 HOH A 74 874 35 HOH HOH . Q 5 HOH A 75 875 547 HOH HOH . Q 5 HOH A 76 876 820 HOH HOH . Q 5 HOH A 77 877 2 HOH HOH . Q 5 HOH A 78 878 172 HOH HOH . Q 5 HOH A 79 879 81 HOH HOH . Q 5 HOH A 80 880 238 HOH HOH . Q 5 HOH A 81 881 201 HOH HOH . Q 5 HOH A 82 882 200 HOH HOH . Q 5 HOH A 83 883 227 HOH HOH . Q 5 HOH A 84 884 32 HOH HOH . Q 5 HOH A 85 885 139 HOH HOH . Q 5 HOH A 86 886 326 HOH HOH . Q 5 HOH A 87 887 12 HOH HOH . Q 5 HOH A 88 888 89 HOH HOH . Q 5 HOH A 89 889 1020 HOH HOH . Q 5 HOH A 90 890 6 HOH HOH . Q 5 HOH A 91 891 5 HOH HOH . Q 5 HOH A 92 892 104 HOH HOH . Q 5 HOH A 93 893 118 HOH HOH . Q 5 HOH A 94 894 111 HOH HOH . Q 5 HOH A 95 895 74 HOH HOH . Q 5 HOH A 96 896 142 HOH HOH . Q 5 HOH A 97 897 133 HOH HOH . Q 5 HOH A 98 898 61 HOH HOH . Q 5 HOH A 99 899 122 HOH HOH . Q 5 HOH A 100 900 324 HOH HOH . Q 5 HOH A 101 901 80 HOH HOH . Q 5 HOH A 102 902 199 HOH HOH . Q 5 HOH A 103 903 333 HOH HOH . Q 5 HOH A 104 904 82 HOH HOH . Q 5 HOH A 105 905 298 HOH HOH . Q 5 HOH A 106 906 266 HOH HOH . Q 5 HOH A 107 907 567 HOH HOH . Q 5 HOH A 108 908 21 HOH HOH . Q 5 HOH A 109 909 96 HOH HOH . Q 5 HOH A 110 910 256 HOH HOH . Q 5 HOH A 111 911 180 HOH HOH . Q 5 HOH A 112 912 181 HOH HOH . Q 5 HOH A 113 913 262 HOH HOH . Q 5 HOH A 114 914 261 HOH HOH . Q 5 HOH A 115 915 218 HOH HOH . Q 5 HOH A 116 916 285 HOH HOH . Q 5 HOH A 117 917 179 HOH HOH . Q 5 HOH A 118 918 197 HOH HOH . Q 5 HOH A 119 919 43 HOH HOH . Q 5 HOH A 120 920 325 HOH HOH . Q 5 HOH A 121 921 222 HOH HOH . Q 5 HOH A 122 922 185 HOH HOH . Q 5 HOH A 123 923 198 HOH HOH . Q 5 HOH A 124 924 503 HOH HOH . Q 5 HOH A 125 925 148 HOH HOH . Q 5 HOH A 126 926 130 HOH HOH . Q 5 HOH A 127 927 113 HOH HOH . Q 5 HOH A 128 928 354 HOH HOH . Q 5 HOH A 129 929 259 HOH HOH . Q 5 HOH A 130 930 40 HOH HOH . Q 5 HOH A 131 931 340 HOH HOH . Q 5 HOH A 132 932 339 HOH HOH . Q 5 HOH A 133 933 294 HOH HOH . Q 5 HOH A 134 934 738 HOH HOH . Q 5 HOH A 135 935 972 HOH HOH . Q 5 HOH A 136 936 833 HOH HOH . Q 5 HOH A 137 937 72 HOH HOH . Q 5 HOH A 138 938 208 HOH HOH . Q 5 HOH A 139 939 84 HOH HOH . Q 5 HOH A 140 940 178 HOH HOH . Q 5 HOH A 141 941 38 HOH HOH . Q 5 HOH A 142 942 54 HOH HOH . Q 5 HOH A 143 943 332 HOH HOH . Q 5 HOH A 144 944 112 HOH HOH . Q 5 HOH A 145 945 87 HOH HOH . Q 5 HOH A 146 946 1115 HOH HOH . Q 5 HOH A 147 947 984 HOH HOH . Q 5 HOH A 148 948 300 HOH HOH . Q 5 HOH A 149 949 138 HOH HOH . Q 5 HOH A 150 950 604 HOH HOH . Q 5 HOH A 151 951 687 HOH HOH . Q 5 HOH A 152 952 170 HOH HOH . Q 5 HOH A 153 953 319 HOH HOH . Q 5 HOH A 154 954 637 HOH HOH . Q 5 HOH A 155 955 235 HOH HOH . Q 5 HOH A 156 956 103 HOH HOH . Q 5 HOH A 157 957 1083 HOH HOH . Q 5 HOH A 158 958 219 HOH HOH . Q 5 HOH A 159 959 188 HOH HOH . Q 5 HOH A 160 960 320 HOH HOH . Q 5 HOH A 161 961 706 HOH HOH . Q 5 HOH A 162 962 233 HOH HOH . Q 5 HOH A 163 963 312 HOH HOH . Q 5 HOH A 164 964 540 HOH HOH . R 5 HOH B 1 601 1133 HOH HOH . R 5 HOH B 2 602 723 HOH HOH . R 5 HOH B 3 603 365 HOH HOH . R 5 HOH B 4 604 558 HOH HOH . R 5 HOH B 5 605 310 HOH HOH . R 5 HOH B 6 606 217 HOH HOH . R 5 HOH B 7 607 587 HOH HOH . R 5 HOH B 8 608 305 HOH HOH . R 5 HOH B 9 609 342 HOH HOH . R 5 HOH B 10 610 453 HOH HOH . R 5 HOH B 11 611 73 HOH HOH . R 5 HOH B 12 612 28 HOH HOH . R 5 HOH B 13 613 584 HOH HOH . R 5 HOH B 14 614 479 HOH HOH . R 5 HOH B 15 615 158 HOH HOH . R 5 HOH B 16 616 132 HOH HOH . R 5 HOH B 17 617 239 HOH HOH . R 5 HOH B 18 618 603 HOH HOH . R 5 HOH B 19 619 57 HOH HOH . R 5 HOH B 20 620 37 HOH HOH . R 5 HOH B 21 621 257 HOH HOH . R 5 HOH B 22 622 14 HOH HOH . R 5 HOH B 23 623 69 HOH HOH . R 5 HOH B 24 624 134 HOH HOH . R 5 HOH B 25 625 18 HOH HOH . R 5 HOH B 26 626 203 HOH HOH . R 5 HOH B 27 627 66 HOH HOH . R 5 HOH B 28 628 8 HOH HOH . R 5 HOH B 29 629 91 HOH HOH . R 5 HOH B 30 630 419 HOH HOH . R 5 HOH B 31 631 56 HOH HOH . R 5 HOH B 32 632 30 HOH HOH . R 5 HOH B 33 633 608 HOH HOH . R 5 HOH B 34 634 223 HOH HOH . R 5 HOH B 35 635 33 HOH HOH . R 5 HOH B 36 636 27 HOH HOH . R 5 HOH B 37 637 34 HOH HOH . R 5 HOH B 38 638 244 HOH HOH . R 5 HOH B 39 639 44 HOH HOH . R 5 HOH B 40 640 157 HOH HOH . R 5 HOH B 41 641 719 HOH HOH . R 5 HOH B 42 642 45 HOH HOH . R 5 HOH B 43 643 315 HOH HOH . R 5 HOH B 44 644 29 HOH HOH . R 5 HOH B 45 645 1 HOH HOH . R 5 HOH B 46 646 76 HOH HOH . R 5 HOH B 47 647 193 HOH HOH . R 5 HOH B 48 648 125 HOH HOH . R 5 HOH B 49 649 463 HOH HOH . R 5 HOH B 50 650 304 HOH HOH . R 5 HOH B 51 651 110 HOH HOH . R 5 HOH B 52 652 114 HOH HOH . R 5 HOH B 53 653 9 HOH HOH . R 5 HOH B 54 654 52 HOH HOH . R 5 HOH B 55 655 117 HOH HOH . R 5 HOH B 56 656 88 HOH HOH . R 5 HOH B 57 657 953 HOH HOH . R 5 HOH B 58 658 58 HOH HOH . R 5 HOH B 59 659 128 HOH HOH . R 5 HOH B 60 660 31 HOH HOH . R 5 HOH B 61 661 154 HOH HOH . R 5 HOH B 62 662 666 HOH HOH . R 5 HOH B 63 663 531 HOH HOH . R 5 HOH B 64 664 68 HOH HOH . R 5 HOH B 65 665 7 HOH HOH . R 5 HOH B 66 666 187 HOH HOH . R 5 HOH B 67 667 137 HOH HOH . R 5 HOH B 68 668 129 HOH HOH . R 5 HOH B 69 669 144 HOH HOH . R 5 HOH B 70 670 162 HOH HOH . R 5 HOH B 71 671 182 HOH HOH . R 5 HOH B 72 672 291 HOH HOH . R 5 HOH B 73 673 290 HOH HOH . R 5 HOH B 74 674 307 HOH HOH . R 5 HOH B 75 675 36 HOH HOH . R 5 HOH B 76 676 292 HOH HOH . R 5 HOH B 77 677 265 HOH HOH . R 5 HOH B 78 678 55 HOH HOH . R 5 HOH B 79 679 26 HOH HOH . R 5 HOH B 80 680 15 HOH HOH . R 5 HOH B 81 681 78 HOH HOH . R 5 HOH B 82 682 39 HOH HOH . R 5 HOH B 83 683 194 HOH HOH . R 5 HOH B 84 684 23 HOH HOH . R 5 HOH B 85 685 206 HOH HOH . R 5 HOH B 86 686 247 HOH HOH . R 5 HOH B 87 687 387 HOH HOH . R 5 HOH B 88 688 41 HOH HOH . R 5 HOH B 89 689 109 HOH HOH . R 5 HOH B 90 690 149 HOH HOH . R 5 HOH B 91 691 401 HOH HOH . R 5 HOH B 92 692 145 HOH HOH . R 5 HOH B 93 693 1012 HOH HOH . R 5 HOH B 94 694 146 HOH HOH . R 5 HOH B 95 695 106 HOH HOH . R 5 HOH B 96 696 51 HOH HOH . R 5 HOH B 97 697 136 HOH HOH . R 5 HOH B 98 698 176 HOH HOH . R 5 HOH B 99 699 121 HOH HOH . R 5 HOH B 100 700 184 HOH HOH . R 5 HOH B 101 701 50 HOH HOH . R 5 HOH B 102 702 287 HOH HOH . R 5 HOH B 103 703 447 HOH HOH . R 5 HOH B 104 704 224 HOH HOH . R 5 HOH B 105 705 580 HOH HOH . R 5 HOH B 106 706 173 HOH HOH . R 5 HOH B 107 707 155 HOH HOH . R 5 HOH B 108 708 831 HOH HOH . R 5 HOH B 109 709 171 HOH HOH . R 5 HOH B 110 710 954 HOH HOH . R 5 HOH B 111 711 269 HOH HOH . R 5 HOH B 112 712 151 HOH HOH . R 5 HOH B 113 713 272 HOH HOH . R 5 HOH B 114 714 416 HOH HOH . R 5 HOH B 115 715 297 HOH HOH . R 5 HOH B 116 716 353 HOH HOH . R 5 HOH B 117 717 102 HOH HOH . R 5 HOH B 118 718 569 HOH HOH . R 5 HOH B 119 719 101 HOH HOH . R 5 HOH B 120 720 302 HOH HOH . R 5 HOH B 121 721 348 HOH HOH . R 5 HOH B 122 722 891 HOH HOH . R 5 HOH B 123 723 418 HOH HOH . R 5 HOH B 124 724 985 HOH HOH . R 5 HOH B 125 725 478 HOH HOH . R 5 HOH B 126 726 94 HOH HOH . R 5 HOH B 127 727 277 HOH HOH . R 5 HOH B 128 728 281 HOH HOH . R 5 HOH B 129 729 466 HOH HOH . R 5 HOH B 130 730 195 HOH HOH . R 5 HOH B 131 731 814 HOH HOH . R 5 HOH B 132 732 435 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . M 4 31.407 -29.853 0.837 1 28.7 ? P PO4 503 B 1 HETATM 2 O O1 PO4 . . . M 4 30.913 -28.83 -0.237 1 30.67 ? O1 PO4 503 B 1 HETATM 3 O O2 PO4 . . . M 4 31.42 -29.095 2.214 1 31.94 ? O2 PO4 503 B 1 HETATM 4 O O3 PO4 . . . M 4 30.475 -31.122 0.909 1 28.18 ? O3 PO4 503 B 1 HETATM 5 O O4 PO4 . . . M 4 32.833 -30.386 0.488 1 34.75 ? O4 PO4 503 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 5 #