data_9D8F # _model_server_result.job_id T3WyDajOxPkW584ZFjB0IA _model_server_result.datetime_utc '2024-12-01 01:35:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9d8f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":603}' # _entry.id 9D8F # _exptl.entry_id 9D8F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9D8F _cell.length_a 52.663 _cell.length_b 71.043 _cell.length_c 158.361 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9D8F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,Q 1 1 B,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 351 n n P O2 PO4 sing 352 n n P O3 PO4 sing 353 n n P O4 PO4 sing 354 n n # _atom_sites.entry_id 9D8F _atom_sites.fract_transf_matrix[1][1] 0.018989 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014076 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006315 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 601 501 PO4 PO4 . D 2 PO4 A 1 602 502 PO4 PO4 . E 2 PO4 A 1 603 503 PO4 PO4 . F 2 PO4 A 1 604 504 PO4 PO4 . G 2 PO4 A 1 605 505 PO4 PO4 . H 2 PO4 A 1 606 506 PO4 PO4 . I 3 GOL A 1 607 602 GOL GOL . J 4 A1A3C A 1 608 601 A1A3C 281 . K 2 PO4 B 1 601 501 PO4 PO4 . L 2 PO4 B 1 602 503 PO4 PO4 . M 2 PO4 B 1 603 504 PO4 PO4 . N 2 PO4 B 1 604 502 PO4 PO4 . O 3 GOL B 1 605 602 GOL GOL . P 4 A1A3C B 1 606 601 A1A3C 281 . Q 5 HOH A 1 701 231 HOH HOH . Q 5 HOH A 2 702 352 HOH HOH . Q 5 HOH A 3 703 313 HOH HOH . Q 5 HOH A 4 704 333 HOH HOH . Q 5 HOH A 5 705 278 HOH HOH . Q 5 HOH A 6 706 275 HOH HOH . Q 5 HOH A 7 707 174 HOH HOH . Q 5 HOH A 8 708 164 HOH HOH . Q 5 HOH A 9 709 13 HOH HOH . Q 5 HOH A 10 710 310 HOH HOH . Q 5 HOH A 11 711 371 HOH HOH . Q 5 HOH A 12 712 202 HOH HOH . Q 5 HOH A 13 713 350 HOH HOH . Q 5 HOH A 14 714 41 HOH HOH . Q 5 HOH A 15 715 263 HOH HOH . Q 5 HOH A 16 716 162 HOH HOH . Q 5 HOH A 17 717 214 HOH HOH . Q 5 HOH A 18 718 178 HOH HOH . Q 5 HOH A 19 719 6 HOH HOH . Q 5 HOH A 20 720 298 HOH HOH . Q 5 HOH A 21 721 63 HOH HOH . Q 5 HOH A 22 722 21 HOH HOH . Q 5 HOH A 23 723 15 HOH HOH . Q 5 HOH A 24 724 48 HOH HOH . Q 5 HOH A 25 725 67 HOH HOH . Q 5 HOH A 26 726 207 HOH HOH . Q 5 HOH A 27 727 324 HOH HOH . Q 5 HOH A 28 728 20 HOH HOH . Q 5 HOH A 29 729 89 HOH HOH . Q 5 HOH A 30 730 291 HOH HOH . Q 5 HOH A 31 731 84 HOH HOH . Q 5 HOH A 32 732 311 HOH HOH . Q 5 HOH A 33 733 8 HOH HOH . Q 5 HOH A 34 734 262 HOH HOH . Q 5 HOH A 35 735 16 HOH HOH . Q 5 HOH A 36 736 9 HOH HOH . Q 5 HOH A 37 737 96 HOH HOH . Q 5 HOH A 38 738 185 HOH HOH . Q 5 HOH A 39 739 47 HOH HOH . Q 5 HOH A 40 740 383 HOH HOH . Q 5 HOH A 41 741 213 HOH HOH . Q 5 HOH A 42 742 43 HOH HOH . Q 5 HOH A 43 743 155 HOH HOH . Q 5 HOH A 44 744 314 HOH HOH . Q 5 HOH A 45 745 280 HOH HOH . Q 5 HOH A 46 746 408 HOH HOH . Q 5 HOH A 47 747 36 HOH HOH . Q 5 HOH A 48 748 85 HOH HOH . Q 5 HOH A 49 749 7 HOH HOH . Q 5 HOH A 50 750 30 HOH HOH . Q 5 HOH A 51 751 169 HOH HOH . Q 5 HOH A 52 752 382 HOH HOH . Q 5 HOH A 53 753 367 HOH HOH . Q 5 HOH A 54 754 35 HOH HOH . Q 5 HOH A 55 755 26 HOH HOH . Q 5 HOH A 56 756 203 HOH HOH . Q 5 HOH A 57 757 305 HOH HOH . Q 5 HOH A 58 758 42 HOH HOH . Q 5 HOH A 59 759 359 HOH HOH . Q 5 HOH A 60 760 366 HOH HOH . Q 5 HOH A 61 761 225 HOH HOH . Q 5 HOH A 62 762 1 HOH HOH . Q 5 HOH A 63 763 10 HOH HOH . Q 5 HOH A 64 764 212 HOH HOH . Q 5 HOH A 65 765 25 HOH HOH . Q 5 HOH A 66 766 193 HOH HOH . Q 5 HOH A 67 767 388 HOH HOH . Q 5 HOH A 68 768 71 HOH HOH . Q 5 HOH A 69 769 72 HOH HOH . Q 5 HOH A 70 770 53 HOH HOH . Q 5 HOH A 71 771 77 HOH HOH . Q 5 HOH A 72 772 90 HOH HOH . Q 5 HOH A 73 773 463 HOH HOH . Q 5 HOH A 74 774 343 HOH HOH . Q 5 HOH A 75 775 186 HOH HOH . Q 5 HOH A 76 776 469 HOH HOH . Q 5 HOH A 77 777 37 HOH HOH . Q 5 HOH A 78 778 188 HOH HOH . Q 5 HOH A 79 779 80 HOH HOH . Q 5 HOH A 80 780 351 HOH HOH . Q 5 HOH A 81 781 199 HOH HOH . Q 5 HOH A 82 782 18 HOH HOH . Q 5 HOH A 83 783 45 HOH HOH . Q 5 HOH A 84 784 345 HOH HOH . Q 5 HOH A 85 785 342 HOH HOH . Q 5 HOH A 86 786 12 HOH HOH . Q 5 HOH A 87 787 187 HOH HOH . Q 5 HOH A 88 788 355 HOH HOH . Q 5 HOH A 89 789 97 HOH HOH . Q 5 HOH A 90 790 189 HOH HOH . Q 5 HOH A 91 791 372 HOH HOH . Q 5 HOH A 92 792 204 HOH HOH . Q 5 HOH A 93 793 136 HOH HOH . Q 5 HOH A 94 794 295 HOH HOH . Q 5 HOH A 95 795 466 HOH HOH . Q 5 HOH A 96 796 150 HOH HOH . Q 5 HOH A 97 797 138 HOH HOH . Q 5 HOH A 98 798 73 HOH HOH . Q 5 HOH A 99 799 336 HOH HOH . Q 5 HOH A 100 800 40 HOH HOH . Q 5 HOH A 101 801 210 HOH HOH . Q 5 HOH A 102 802 127 HOH HOH . Q 5 HOH A 103 803 218 HOH HOH . Q 5 HOH A 104 804 209 HOH HOH . Q 5 HOH A 105 805 349 HOH HOH . Q 5 HOH A 106 806 28 HOH HOH . Q 5 HOH A 107 807 394 HOH HOH . Q 5 HOH A 108 808 223 HOH HOH . Q 5 HOH A 109 809 282 HOH HOH . Q 5 HOH A 110 810 68 HOH HOH . Q 5 HOH A 111 811 87 HOH HOH . Q 5 HOH A 112 812 329 HOH HOH . Q 5 HOH A 113 813 226 HOH HOH . Q 5 HOH A 114 814 140 HOH HOH . Q 5 HOH A 115 815 220 HOH HOH . Q 5 HOH A 116 816 195 HOH HOH . Q 5 HOH A 117 817 49 HOH HOH . Q 5 HOH A 118 818 375 HOH HOH . Q 5 HOH A 119 819 143 HOH HOH . Q 5 HOH A 120 820 198 HOH HOH . Q 5 HOH A 121 821 467 HOH HOH . Q 5 HOH A 122 822 61 HOH HOH . Q 5 HOH A 123 823 59 HOH HOH . Q 5 HOH A 124 824 468 HOH HOH . Q 5 HOH A 125 825 302 HOH HOH . Q 5 HOH A 126 826 191 HOH HOH . Q 5 HOH A 127 827 230 HOH HOH . Q 5 HOH A 128 828 93 HOH HOH . Q 5 HOH A 129 829 56 HOH HOH . Q 5 HOH A 130 830 201 HOH HOH . Q 5 HOH A 131 831 335 HOH HOH . Q 5 HOH A 132 832 319 HOH HOH . Q 5 HOH A 133 833 296 HOH HOH . Q 5 HOH A 134 834 221 HOH HOH . Q 5 HOH A 135 835 283 HOH HOH . Q 5 HOH A 136 836 216 HOH HOH . Q 5 HOH A 137 837 272 HOH HOH . Q 5 HOH A 138 838 406 HOH HOH . Q 5 HOH A 139 839 14 HOH HOH . Q 5 HOH A 140 840 227 HOH HOH . Q 5 HOH A 141 841 339 HOH HOH . Q 5 HOH A 142 842 374 HOH HOH . Q 5 HOH A 143 843 331 HOH HOH . Q 5 HOH A 144 844 219 HOH HOH . Q 5 HOH A 145 845 192 HOH HOH . Q 5 HOH A 146 846 194 HOH HOH . Q 5 HOH A 147 847 224 HOH HOH . Q 5 HOH A 148 848 344 HOH HOH . R 5 HOH B 1 701 464 HOH HOH . R 5 HOH B 2 702 245 HOH HOH . R 5 HOH B 3 703 290 HOH HOH . R 5 HOH B 4 704 317 HOH HOH . R 5 HOH B 5 705 114 HOH HOH . R 5 HOH B 6 706 32 HOH HOH . R 5 HOH B 7 707 318 HOH HOH . R 5 HOH B 8 708 121 HOH HOH . R 5 HOH B 9 709 19 HOH HOH . R 5 HOH B 10 710 289 HOH HOH . R 5 HOH B 11 711 284 HOH HOH . R 5 HOH B 12 712 92 HOH HOH . R 5 HOH B 13 713 249 HOH HOH . R 5 HOH B 14 714 34 HOH HOH . R 5 HOH B 15 715 54 HOH HOH . R 5 HOH B 16 716 3 HOH HOH . R 5 HOH B 17 717 39 HOH HOH . R 5 HOH B 18 718 5 HOH HOH . R 5 HOH B 19 719 246 HOH HOH . R 5 HOH B 20 720 315 HOH HOH . R 5 HOH B 21 721 170 HOH HOH . R 5 HOH B 22 722 111 HOH HOH . R 5 HOH B 23 723 52 HOH HOH . R 5 HOH B 24 724 183 HOH HOH . R 5 HOH B 25 725 304 HOH HOH . R 5 HOH B 26 726 22 HOH HOH . R 5 HOH B 27 727 4 HOH HOH . R 5 HOH B 28 728 237 HOH HOH . R 5 HOH B 29 729 265 HOH HOH . R 5 HOH B 30 730 33 HOH HOH . R 5 HOH B 31 731 29 HOH HOH . R 5 HOH B 32 732 57 HOH HOH . R 5 HOH B 33 733 135 HOH HOH . R 5 HOH B 34 734 260 HOH HOH . R 5 HOH B 35 735 320 HOH HOH . R 5 HOH B 36 736 258 HOH HOH . R 5 HOH B 37 737 181 HOH HOH . R 5 HOH B 38 738 253 HOH HOH . R 5 HOH B 39 739 11 HOH HOH . R 5 HOH B 40 740 101 HOH HOH . R 5 HOH B 41 741 58 HOH HOH . R 5 HOH B 42 742 358 HOH HOH . R 5 HOH B 43 743 27 HOH HOH . R 5 HOH B 44 744 17 HOH HOH . R 5 HOH B 45 745 44 HOH HOH . R 5 HOH B 46 746 316 HOH HOH . R 5 HOH B 47 747 267 HOH HOH . R 5 HOH B 48 748 107 HOH HOH . R 5 HOH B 49 749 273 HOH HOH . R 5 HOH B 50 750 51 HOH HOH . R 5 HOH B 51 751 256 HOH HOH . R 5 HOH B 52 752 236 HOH HOH . R 5 HOH B 53 753 166 HOH HOH . R 5 HOH B 54 754 46 HOH HOH . R 5 HOH B 55 755 444 HOH HOH . R 5 HOH B 56 756 110 HOH HOH . R 5 HOH B 57 757 182 HOH HOH . R 5 HOH B 58 758 248 HOH HOH . R 5 HOH B 59 759 233 HOH HOH . R 5 HOH B 60 760 338 HOH HOH . R 5 HOH B 61 761 451 HOH HOH . R 5 HOH B 62 762 23 HOH HOH . R 5 HOH B 63 763 106 HOH HOH . R 5 HOH B 64 764 270 HOH HOH . R 5 HOH B 65 765 81 HOH HOH . R 5 HOH B 66 766 243 HOH HOH . R 5 HOH B 67 767 167 HOH HOH . R 5 HOH B 68 768 235 HOH HOH . R 5 HOH B 69 769 234 HOH HOH . R 5 HOH B 70 770 264 HOH HOH . R 5 HOH B 71 771 145 HOH HOH . R 5 HOH B 72 772 293 HOH HOH . R 5 HOH B 73 773 179 HOH HOH . R 5 HOH B 74 774 241 HOH HOH . R 5 HOH B 75 775 250 HOH HOH . R 5 HOH B 76 776 120 HOH HOH . R 5 HOH B 77 777 180 HOH HOH . R 5 HOH B 78 778 149 HOH HOH . R 5 HOH B 79 779 285 HOH HOH . R 5 HOH B 80 780 269 HOH HOH . R 5 HOH B 81 781 240 HOH HOH . R 5 HOH B 82 782 119 HOH HOH . R 5 HOH B 83 783 286 HOH HOH . R 5 HOH B 84 784 31 HOH HOH . R 5 HOH B 85 785 255 HOH HOH . R 5 HOH B 86 786 337 HOH HOH . R 5 HOH B 87 787 239 HOH HOH . R 5 HOH B 88 788 326 HOH HOH . R 5 HOH B 89 789 112 HOH HOH . R 5 HOH B 90 790 252 HOH HOH . R 5 HOH B 91 791 55 HOH HOH . R 5 HOH B 92 792 299 HOH HOH . R 5 HOH B 93 793 254 HOH HOH . R 5 HOH B 94 794 309 HOH HOH . R 5 HOH B 95 795 294 HOH HOH . R 5 HOH B 96 796 259 HOH HOH . R 5 HOH B 97 797 327 HOH HOH . R 5 HOH B 98 798 307 HOH HOH . R 5 HOH B 99 799 242 HOH HOH . R 5 HOH B 100 800 323 HOH HOH . R 5 HOH B 101 801 346 HOH HOH . R 5 HOH B 102 802 430 HOH HOH . R 5 HOH B 103 803 432 HOH HOH . R 5 HOH B 104 804 113 HOH HOH . R 5 HOH B 105 805 306 HOH HOH . R 5 HOH B 106 806 251 HOH HOH . R 5 HOH B 107 807 465 HOH HOH . R 5 HOH B 108 808 384 HOH HOH . R 5 HOH B 109 809 244 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 2 27.745 5.728 -33.939 1 32.87 ? P PO4 603 A 1 HETATM 2 O O1 PO4 . . . E 2 28.436 5.913 -32.556 1 36.83 ? O1 PO4 603 A 1 HETATM 3 O O2 PO4 . . . E 2 26.297 6.323 -33.844 1 34.77 ? O2 PO4 603 A 1 HETATM 4 O O3 PO4 . . . E 2 28.541 6.448 -35.073 1 32.67 ? O3 PO4 603 A 1 HETATM 5 O O4 PO4 . . . E 2 27.682 4.207 -34.316 1 27.88 ? O4 PO4 603 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 5 #