data_9D8Z # _model_server_result.job_id u4My_M7dtKduVuJ5RwFxaA _model_server_result.datetime_utc '2025-03-30 00:24:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9d8z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":605}' # _entry.id 9D8Z # _exptl.entry_id 9D8Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9D8Z _cell.length_a 52.438 _cell.length_b 71.205 _cell.length_c 158.979 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9D8Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,O 1 1 B,H,I,J,K,L,M,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 343 n n P O2 PO4 sing 344 n n P O3 PO4 sing 345 n n P O4 PO4 sing 346 n n # _atom_sites.entry_id 9D8Z _atom_sites.fract_transf_matrix[1][1] 0.01907 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014044 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00629 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A1A3D A 1 600 600 A1A3D 228 . D 3 PO4 A 1 601 601 PO4 PO4 . E 3 PO4 A 1 602 602 PO4 PO4 . F 3 PO4 A 1 603 603 PO4 PO4 . G 3 PO4 A 1 604 604 PO4 PO4 . H 2 A1A3D B 1 600 600 A1A3D 228 . I 3 PO4 B 1 601 601 PO4 PO4 . J 3 PO4 B 1 602 602 PO4 PO4 . K 3 PO4 B 1 603 603 PO4 PO4 . L 3 PO4 B 1 604 604 PO4 PO4 . M 3 PO4 B 1 605 605 PO4 PO4 . N 3 PO4 B 1 606 606 PO4 PO4 . O 4 HOH A 1 701 350 HOH HOH . O 4 HOH A 2 702 184 HOH HOH . O 4 HOH A 3 703 349 HOH HOH . O 4 HOH A 4 704 343 HOH HOH . O 4 HOH A 5 705 59 HOH HOH . O 4 HOH A 6 706 150 HOH HOH . O 4 HOH A 7 707 10 HOH HOH . O 4 HOH A 8 708 128 HOH HOH . O 4 HOH A 9 709 7 HOH HOH . O 4 HOH A 10 710 40 HOH HOH . O 4 HOH A 11 711 34 HOH HOH . O 4 HOH A 12 712 50 HOH HOH . O 4 HOH A 13 713 120 HOH HOH . O 4 HOH A 14 714 12 HOH HOH . O 4 HOH A 15 715 224 HOH HOH . O 4 HOH A 16 716 45 HOH HOH . O 4 HOH A 17 717 369 HOH HOH . O 4 HOH A 18 718 44 HOH HOH . O 4 HOH A 19 719 372 HOH HOH . O 4 HOH A 20 720 108 HOH HOH . O 4 HOH A 21 721 178 HOH HOH . O 4 HOH A 22 722 337 HOH HOH . O 4 HOH A 23 723 119 HOH HOH . O 4 HOH A 24 724 207 HOH HOH . O 4 HOH A 25 725 112 HOH HOH . O 4 HOH A 26 726 183 HOH HOH . O 4 HOH A 27 727 24 HOH HOH . O 4 HOH A 28 728 107 HOH HOH . O 4 HOH A 29 729 17 HOH HOH . O 4 HOH A 30 730 153 HOH HOH . O 4 HOH A 31 731 35 HOH HOH . O 4 HOH A 32 732 2 HOH HOH . O 4 HOH A 33 733 9 HOH HOH . O 4 HOH A 34 734 126 HOH HOH . O 4 HOH A 35 735 84 HOH HOH . O 4 HOH A 36 736 22 HOH HOH . O 4 HOH A 37 737 70 HOH HOH . O 4 HOH A 38 738 27 HOH HOH . O 4 HOH A 39 739 142 HOH HOH . O 4 HOH A 40 740 230 HOH HOH . O 4 HOH A 41 741 367 HOH HOH . O 4 HOH A 42 742 90 HOH HOH . O 4 HOH A 43 743 13 HOH HOH . O 4 HOH A 44 744 79 HOH HOH . O 4 HOH A 45 745 368 HOH HOH . O 4 HOH A 46 746 77 HOH HOH . O 4 HOH A 47 747 366 HOH HOH . O 4 HOH A 48 748 31 HOH HOH . O 4 HOH A 49 749 86 HOH HOH . O 4 HOH A 50 750 127 HOH HOH . O 4 HOH A 51 751 179 HOH HOH . O 4 HOH A 52 752 156 HOH HOH . O 4 HOH A 53 753 104 HOH HOH . O 4 HOH A 54 754 351 HOH HOH . O 4 HOH A 55 755 371 HOH HOH . O 4 HOH A 56 756 57 HOH HOH . O 4 HOH A 57 757 62 HOH HOH . O 4 HOH A 58 758 319 HOH HOH . O 4 HOH A 59 759 364 HOH HOH . O 4 HOH A 60 760 180 HOH HOH . O 4 HOH A 61 761 138 HOH HOH . O 4 HOH A 62 762 139 HOH HOH . O 4 HOH A 63 763 414 HOH HOH . O 4 HOH A 64 764 113 HOH HOH . O 4 HOH A 65 765 416 HOH HOH . O 4 HOH A 66 766 46 HOH HOH . O 4 HOH A 67 767 374 HOH HOH . O 4 HOH A 68 768 101 HOH HOH . O 4 HOH A 69 769 149 HOH HOH . O 4 HOH A 70 770 422 HOH HOH . O 4 HOH A 71 771 95 HOH HOH . O 4 HOH A 72 772 19 HOH HOH . O 4 HOH A 73 773 114 HOH HOH . O 4 HOH A 74 774 411 HOH HOH . O 4 HOH A 75 775 144 HOH HOH . O 4 HOH A 76 776 415 HOH HOH . O 4 HOH A 77 777 148 HOH HOH . O 4 HOH A 78 778 406 HOH HOH . O 4 HOH A 79 779 407 HOH HOH . O 4 HOH A 80 780 346 HOH HOH . O 4 HOH A 81 781 412 HOH HOH . O 4 HOH A 82 782 155 HOH HOH . O 4 HOH A 83 783 103 HOH HOH . O 4 HOH A 84 784 348 HOH HOH . O 4 HOH A 85 785 347 HOH HOH . O 4 HOH A 86 786 359 HOH HOH . O 4 HOH A 87 787 329 HOH HOH . O 4 HOH A 88 788 362 HOH HOH . O 4 HOH A 89 789 121 HOH HOH . O 4 HOH A 90 790 370 HOH HOH . O 4 HOH A 91 791 363 HOH HOH . O 4 HOH A 92 792 373 HOH HOH . O 4 HOH A 93 793 56 HOH HOH . O 4 HOH A 94 794 306 HOH HOH . O 4 HOH A 95 795 417 HOH HOH . O 4 HOH A 96 796 358 HOH HOH . O 4 HOH A 97 797 410 HOH HOH . O 4 HOH A 98 798 413 HOH HOH . O 4 HOH A 99 799 361 HOH HOH . O 4 HOH A 100 800 365 HOH HOH . P 4 HOH B 1 701 74 HOH HOH . P 4 HOH B 2 702 28 HOH HOH . P 4 HOH B 3 703 419 HOH HOH . P 4 HOH B 4 704 125 HOH HOH . P 4 HOH B 5 705 91 HOH HOH . P 4 HOH B 6 706 133 HOH HOH . P 4 HOH B 7 707 379 HOH HOH . P 4 HOH B 8 708 356 HOH HOH . P 4 HOH B 9 709 262 HOH HOH . P 4 HOH B 10 710 269 HOH HOH . P 4 HOH B 11 711 352 HOH HOH . P 4 HOH B 12 712 75 HOH HOH . P 4 HOH B 13 713 360 HOH HOH . P 4 HOH B 14 714 42 HOH HOH . P 4 HOH B 15 715 47 HOH HOH . P 4 HOH B 16 716 83 HOH HOH . P 4 HOH B 17 717 397 HOH HOH . P 4 HOH B 18 718 26 HOH HOH . P 4 HOH B 19 719 41 HOH HOH . P 4 HOH B 20 720 4 HOH HOH . P 4 HOH B 21 721 157 HOH HOH . P 4 HOH B 22 722 87 HOH HOH . P 4 HOH B 23 723 182 HOH HOH . P 4 HOH B 24 724 48 HOH HOH . P 4 HOH B 25 725 8 HOH HOH . P 4 HOH B 26 726 376 HOH HOH . P 4 HOH B 27 727 355 HOH HOH . P 4 HOH B 28 728 72 HOH HOH . P 4 HOH B 29 729 334 HOH HOH . P 4 HOH B 30 730 29 HOH HOH . P 4 HOH B 31 731 30 HOH HOH . P 4 HOH B 32 732 69 HOH HOH . P 4 HOH B 33 733 36 HOH HOH . P 4 HOH B 34 734 338 HOH HOH . P 4 HOH B 35 735 14 HOH HOH . P 4 HOH B 36 736 124 HOH HOH . P 4 HOH B 37 737 85 HOH HOH . P 4 HOH B 38 738 418 HOH HOH . P 4 HOH B 39 739 211 HOH HOH . P 4 HOH B 40 740 93 HOH HOH . P 4 HOH B 41 741 32 HOH HOH . P 4 HOH B 42 742 3 HOH HOH . P 4 HOH B 43 743 33 HOH HOH . P 4 HOH B 44 744 16 HOH HOH . P 4 HOH B 45 745 37 HOH HOH . P 4 HOH B 46 746 78 HOH HOH . P 4 HOH B 47 747 106 HOH HOH . P 4 HOH B 48 748 377 HOH HOH . P 4 HOH B 49 749 118 HOH HOH . P 4 HOH B 50 750 147 HOH HOH . P 4 HOH B 51 751 39 HOH HOH . P 4 HOH B 52 752 392 HOH HOH . P 4 HOH B 53 753 116 HOH HOH . P 4 HOH B 54 754 18 HOH HOH . P 4 HOH B 55 755 5 HOH HOH . P 4 HOH B 56 756 380 HOH HOH . P 4 HOH B 57 757 58 HOH HOH . P 4 HOH B 58 758 6 HOH HOH . P 4 HOH B 59 759 25 HOH HOH . P 4 HOH B 60 760 23 HOH HOH . P 4 HOH B 61 761 165 HOH HOH . P 4 HOH B 62 762 1 HOH HOH . P 4 HOH B 63 763 15 HOH HOH . P 4 HOH B 64 764 68 HOH HOH . P 4 HOH B 65 765 20 HOH HOH . P 4 HOH B 66 766 333 HOH HOH . P 4 HOH B 67 767 105 HOH HOH . P 4 HOH B 68 768 420 HOH HOH . P 4 HOH B 69 769 11 HOH HOH . P 4 HOH B 70 770 421 HOH HOH . P 4 HOH B 71 771 81 HOH HOH . P 4 HOH B 72 772 381 HOH HOH . P 4 HOH B 73 773 110 HOH HOH . P 4 HOH B 74 774 395 HOH HOH . P 4 HOH B 75 775 354 HOH HOH . P 4 HOH B 76 776 122 HOH HOH . P 4 HOH B 77 777 130 HOH HOH . P 4 HOH B 78 778 164 HOH HOH . P 4 HOH B 79 779 399 HOH HOH . P 4 HOH B 80 780 65 HOH HOH . P 4 HOH B 81 781 162 HOH HOH . P 4 HOH B 82 782 247 HOH HOH . P 4 HOH B 83 783 60 HOH HOH . P 4 HOH B 84 784 197 HOH HOH . P 4 HOH B 85 785 260 HOH HOH . P 4 HOH B 86 786 111 HOH HOH . P 4 HOH B 87 787 54 HOH HOH . P 4 HOH B 88 788 396 HOH HOH . P 4 HOH B 89 789 353 HOH HOH . P 4 HOH B 90 790 240 HOH HOH . P 4 HOH B 91 791 123 HOH HOH . P 4 HOH B 92 792 102 HOH HOH . P 4 HOH B 93 793 400 HOH HOH . P 4 HOH B 94 794 97 HOH HOH . P 4 HOH B 95 795 61 HOH HOH . P 4 HOH B 96 796 205 HOH HOH . P 4 HOH B 97 797 71 HOH HOH . P 4 HOH B 98 798 117 HOH HOH . P 4 HOH B 99 799 76 HOH HOH . P 4 HOH B 100 800 408 HOH HOH . P 4 HOH B 101 801 38 HOH HOH . P 4 HOH B 102 802 167 HOH HOH . P 4 HOH B 103 803 378 HOH HOH . P 4 HOH B 104 804 53 HOH HOH . P 4 HOH B 105 805 336 HOH HOH . P 4 HOH B 106 806 151 HOH HOH . P 4 HOH B 107 807 254 HOH HOH . P 4 HOH B 108 808 385 HOH HOH . P 4 HOH B 109 809 141 HOH HOH . P 4 HOH B 110 810 332 HOH HOH . P 4 HOH B 111 811 195 HOH HOH . P 4 HOH B 112 812 140 HOH HOH . P 4 HOH B 113 813 55 HOH HOH . P 4 HOH B 114 814 327 HOH HOH . P 4 HOH B 115 815 290 HOH HOH . P 4 HOH B 116 816 339 HOH HOH . P 4 HOH B 117 817 390 HOH HOH . P 4 HOH B 118 818 82 HOH HOH . P 4 HOH B 119 819 73 HOH HOH . P 4 HOH B 120 820 387 HOH HOH . P 4 HOH B 121 821 98 HOH HOH . P 4 HOH B 122 822 109 HOH HOH . P 4 HOH B 123 823 80 HOH HOH . P 4 HOH B 124 824 382 HOH HOH . P 4 HOH B 125 825 335 HOH HOH . P 4 HOH B 126 826 357 HOH HOH . P 4 HOH B 127 827 185 HOH HOH . P 4 HOH B 128 828 409 HOH HOH . P 4 HOH B 129 829 384 HOH HOH . P 4 HOH B 130 830 405 HOH HOH . P 4 HOH B 131 831 375 HOH HOH . P 4 HOH B 132 832 344 HOH HOH . P 4 HOH B 133 833 391 HOH HOH . P 4 HOH B 134 834 394 HOH HOH . P 4 HOH B 135 835 331 HOH HOH . P 4 HOH B 136 836 342 HOH HOH . P 4 HOH B 137 837 21 HOH HOH . P 4 HOH B 138 838 383 HOH HOH . P 4 HOH B 139 839 315 HOH HOH . P 4 HOH B 140 840 404 HOH HOH . P 4 HOH B 141 841 386 HOH HOH . P 4 HOH B 142 842 423 HOH HOH . P 4 HOH B 143 843 401 HOH HOH . P 4 HOH B 144 844 340 HOH HOH . P 4 HOH B 145 845 323 HOH HOH . P 4 HOH B 146 846 398 HOH HOH . P 4 HOH B 147 847 289 HOH HOH . P 4 HOH B 148 848 389 HOH HOH . P 4 HOH B 149 849 341 HOH HOH . P 4 HOH B 150 850 281 HOH HOH . P 4 HOH B 151 851 388 HOH HOH . P 4 HOH B 152 852 403 HOH HOH . P 4 HOH B 153 853 92 HOH HOH . P 4 HOH B 154 854 424 HOH HOH . P 4 HOH B 155 855 393 HOH HOH . P 4 HOH B 156 856 402 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . M 3 -10.426 15.565 43.493 1 45.33 ? P PO4 605 B 1 HETATM 2 O O1 PO4 . . . M 3 -11.064 15.937 42.096 1 45.33 ? O1 PO4 605 B 1 HETATM 3 O O2 PO4 . . . M 3 -11.274 14.386 44.124 1 37.07 ? O2 PO4 605 B 1 HETATM 4 O O3 PO4 . . . M 3 -9.004 15.078 43.193 1 37.78 ? O3 PO4 605 B 1 HETATM 5 O O4 PO4 . . . M 3 -10.448 16.78 44.474 1 43.77 ? O4 PO4 605 B 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 868 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 5 #