data_9D9M # _model_server_result.job_id XgVoJjW5WrmaYl_qPjsaxQ _model_server_result.datetime_utc '2024-10-18 05:18:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9d9m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 9D9M # _exptl.entry_id 9D9M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 9D9M _cell.length_a 108.328 _cell.length_b 108.328 _cell.length_c 264.894 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9D9M _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_465 -x-1,-y+1,z -1 0 0 0 -1 0 0 0 1 -108.328 108.328 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 74 A SER 74 1_555 A N SEP 75 A SEP 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale2 A C SEP 75 A SEP 75 1_555 A N ALA 76 A ALA 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 308 n n S O2 SO4 doub 309 n n S O3 SO4 sing 310 n n S O4 SO4 sing 311 n n # _atom_sites.entry_id 9D9M _atom_sites.fract_transf_matrix[1][1] 0.009231 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009231 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003775 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 401 1 SO4 SO4 . C 2 SO4 A 1 402 2 SO4 SO4 . D 2 SO4 A 1 403 3 SO4 SO4 . E 2 SO4 A 1 404 4 SO4 SO4 . F 2 SO4 A 1 405 5 SO4 SO4 . G 2 SO4 A 1 406 6 SO4 SO4 . H 2 SO4 A 1 407 7 SO4 SO4 . I 2 SO4 A 1 408 8 SO4 SO4 . J 2 SO4 A 1 409 9 SO4 SO4 . K 2 SO4 A 1 410 10 SO4 SO4 . L 2 SO4 A 1 411 11 SO4 SO4 . M 3 CL A 1 412 12 CL CL . N 4 HOH A 1 501 42 HOH HOH . N 4 HOH A 2 502 38 HOH HOH . N 4 HOH A 3 503 16 HOH HOH . N 4 HOH A 4 504 59 HOH HOH . N 4 HOH A 5 505 40 HOH HOH . N 4 HOH A 6 506 18 HOH HOH . N 4 HOH A 7 507 30 HOH HOH . N 4 HOH A 8 508 48 HOH HOH . N 4 HOH A 9 509 13 HOH HOH . N 4 HOH A 10 510 65 HOH HOH . N 4 HOH A 11 511 19 HOH HOH . N 4 HOH A 12 512 35 HOH HOH . N 4 HOH A 13 513 2 HOH HOH . N 4 HOH A 14 514 1 HOH HOH . N 4 HOH A 15 515 20 HOH HOH . N 4 HOH A 16 516 58 HOH HOH . N 4 HOH A 17 517 24 HOH HOH . N 4 HOH A 18 518 60 HOH HOH . N 4 HOH A 19 519 17 HOH HOH . N 4 HOH A 20 520 11 HOH HOH . N 4 HOH A 21 521 36 HOH HOH . N 4 HOH A 22 522 31 HOH HOH . N 4 HOH A 23 523 25 HOH HOH . N 4 HOH A 24 524 22 HOH HOH . N 4 HOH A 25 525 14 HOH HOH . N 4 HOH A 26 526 10 HOH HOH . N 4 HOH A 27 527 4 HOH HOH . N 4 HOH A 28 528 32 HOH HOH . N 4 HOH A 29 529 29 HOH HOH . N 4 HOH A 30 530 7 HOH HOH . N 4 HOH A 31 531 15 HOH HOH . N 4 HOH A 32 532 50 HOH HOH . N 4 HOH A 33 533 33 HOH HOH . N 4 HOH A 34 534 39 HOH HOH . N 4 HOH A 35 535 6 HOH HOH . N 4 HOH A 36 536 37 HOH HOH . N 4 HOH A 37 537 23 HOH HOH . N 4 HOH A 38 538 62 HOH HOH . N 4 HOH A 39 539 34 HOH HOH . N 4 HOH A 40 540 61 HOH HOH . N 4 HOH A 41 541 5 HOH HOH . N 4 HOH A 42 542 57 HOH HOH . N 4 HOH A 43 543 43 HOH HOH . N 4 HOH A 44 544 28 HOH HOH . N 4 HOH A 45 545 26 HOH HOH . N 4 HOH A 46 546 8 HOH HOH . N 4 HOH A 47 547 44 HOH HOH . N 4 HOH A 48 548 12 HOH HOH . N 4 HOH A 49 549 54 HOH HOH . N 4 HOH A 50 550 9 HOH HOH . N 4 HOH A 51 551 47 HOH HOH . N 4 HOH A 52 552 3 HOH HOH . N 4 HOH A 53 553 64 HOH HOH . N 4 HOH A 54 554 21 HOH HOH . N 4 HOH A 55 555 51 HOH HOH . N 4 HOH A 56 556 52 HOH HOH . N 4 HOH A 57 557 53 HOH HOH . N 4 HOH A 58 558 27 HOH HOH . N 4 HOH A 59 559 46 HOH HOH . N 4 HOH A 60 560 49 HOH HOH . N 4 HOH A 61 561 56 HOH HOH . N 4 HOH A 62 562 55 HOH HOH . N 4 HOH A 63 563 41 HOH HOH . N 4 HOH A 64 564 63 HOH HOH . N 4 HOH A 65 565 45 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 -42.343 34.585 26.559 1 58.23 ? S SO4 401 A 1 HETATM 2 O O1 SO4 . . . B 2 -41.811 34.239 25.208 1 54.36 ? O1 SO4 401 A 1 HETATM 3 O O2 SO4 . . . B 2 -43.611 35.374 26.456 1 49.25 ? O2 SO4 401 A 1 HETATM 4 O O3 SO4 . . . B 2 -42.613 33.276 27.28 1 64.5 ? O3 SO4 401 A 1 HETATM 5 O O4 SO4 . . . B 2 -41.352 35.407 27.328 1 59.77 ? O4 SO4 401 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #