data_9DAR # _model_server_result.job_id xwR3lNAPsUnmVgjmN5GDhw _model_server_result.datetime_utc '2025-02-27 10:02:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9dar # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 9DAR # _exptl.entry_id 9DAR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 251.715 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(4-chlorophenyl)-6,6-dimethyl-1,6-dihydro-1,3,5-triazine-2,4-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9DAR _cell.length_a 68.076 _cell.length_b 68.076 _cell.length_c 212.602 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9DAR _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H14 Cl N5' _chem_comp.formula_weight 251.715 _chem_comp.id 1CY _chem_comp.mon_nstd_flag . _chem_comp.name 1-(4-chlorophenyl)-6,6-dimethyl-1,6-dihydro-1,3,5-triazine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Cycloguanil # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 N1 1CY sing 1 n n C2 N1 1CY doub 2 n n N3 C2 1CY sing 3 n n C2 N7 1CY sing 4 n n C4 N3 1CY doub 5 n n N8 C4 1CY sing 6 n n C4 N5 1CY sing 7 n n C11 N5 1CY sing 8 n n N5 C6 1CY sing 9 n n C6 C10 1CY sing 10 n n C6 C9 1CY sing 11 n n N7 HN7 1CY sing 12 n n N7 HN7A 1CY sing 13 n n N8 HN8 1CY sing 14 n n N8 HN8A 1CY sing 15 n n C9 H9 1CY sing 16 n n C9 H9A 1CY sing 17 n n C9 H9B 1CY sing 18 n n C10 H10 1CY sing 19 n n C10 H10A 1CY sing 20 n n C10 H10B 1CY sing 21 n n C16 C11 1CY doub 22 n y C12 C11 1CY sing 23 n y C13 C12 1CY doub 24 n y C12 H12 1CY sing 25 n n C14 C13 1CY sing 26 n y C13 H13 1CY sing 27 n n CL17 C14 1CY sing 28 n n C14 C15 1CY doub 29 n y C15 C16 1CY sing 30 n y C15 H15 1CY sing 31 n n C16 H16 1CY sing 32 n n # _atom_sites.entry_id 9DAR _atom_sites.fract_transf_matrix[1][1] 0.014689 _atom_sites.fract_transf_matrix[1][2] 0.008481 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016962 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004704 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1CY A 1 201 201 1CY 1CY . C 3 FLC A 1 202 202 FLC FLC . D 4 HOH A 1 301 347 HOH HOH . D 4 HOH A 2 302 310 HOH HOH . D 4 HOH A 3 303 307 HOH HOH . D 4 HOH A 4 304 311 HOH HOH . D 4 HOH A 5 305 340 HOH HOH . D 4 HOH A 6 306 322 HOH HOH . D 4 HOH A 7 307 343 HOH HOH . D 4 HOH A 8 308 348 HOH HOH . D 4 HOH A 9 309 309 HOH HOH . D 4 HOH A 10 310 341 HOH HOH . D 4 HOH A 11 311 320 HOH HOH . D 4 HOH A 12 312 346 HOH HOH . D 4 HOH A 13 313 327 HOH HOH . D 4 HOH A 14 314 336 HOH HOH . D 4 HOH A 15 315 323 HOH HOH . D 4 HOH A 16 316 315 HOH HOH . D 4 HOH A 17 317 302 HOH HOH . D 4 HOH A 18 318 301 HOH HOH . D 4 HOH A 19 319 331 HOH HOH . D 4 HOH A 20 320 328 HOH HOH . D 4 HOH A 21 321 306 HOH HOH . D 4 HOH A 22 322 317 HOH HOH . D 4 HOH A 23 323 325 HOH HOH . D 4 HOH A 24 324 314 HOH HOH . D 4 HOH A 25 325 338 HOH HOH . D 4 HOH A 26 326 319 HOH HOH . D 4 HOH A 27 327 334 HOH HOH . D 4 HOH A 28 328 345 HOH HOH . D 4 HOH A 29 329 318 HOH HOH . D 4 HOH A 30 330 308 HOH HOH . D 4 HOH A 31 331 303 HOH HOH . D 4 HOH A 32 332 344 HOH HOH . D 4 HOH A 33 333 335 HOH HOH . D 4 HOH A 34 334 305 HOH HOH . D 4 HOH A 35 335 333 HOH HOH . D 4 HOH A 36 336 329 HOH HOH . D 4 HOH A 37 337 304 HOH HOH . D 4 HOH A 38 338 342 HOH HOH . D 4 HOH A 39 339 321 HOH HOH . D 4 HOH A 40 340 330 HOH HOH . D 4 HOH A 41 341 312 HOH HOH . D 4 HOH A 42 342 332 HOH HOH . D 4 HOH A 43 343 339 HOH HOH . D 4 HOH A 44 344 316 HOH HOH . D 4 HOH A 45 345 337 HOH HOH . D 4 HOH A 46 346 326 HOH HOH . D 4 HOH A 47 347 324 HOH HOH . D 4 HOH A 48 348 313 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 1CY . . . B 2 -20.417 25.548 -8.514 1 42.06 ? N1 1CY 201 A 1 HETATM 2 C C2 1CY . . . B 2 -21.394 24.974 -7.795 1 40.12 ? C2 1CY 201 A 1 HETATM 3 N N3 1CY . . . B 2 -21.283 24.506 -6.532 1 42.53 ? N3 1CY 201 A 1 HETATM 4 C C4 1CY . . . B 2 -20.221 24.914 -5.84 1 36.3 ? C4 1CY 201 A 1 HETATM 5 N N5 1CY . . . B 2 -19.185 25.571 -6.443 1 43.84 ? N5 1CY 201 A 1 HETATM 6 C C6 1CY . . . B 2 -19.086 25.692 -7.912 1 41.68 ? C6 1CY 201 A 1 HETATM 7 N N7 1CY . . . B 2 -22.596 24.838 -8.338 1 42.88 ? N7 1CY 201 A 1 HETATM 8 N N8 1CY . . . B 2 -20.152 24.616 -4.56 1 38.86 ? N8 1CY 201 A 1 HETATM 9 C C9 1CY . . . B 2 -18.168 24.58 -8.387 1 46.77 ? C9 1CY 201 A 1 HETATM 10 C C10 1CY . . . B 2 -18.533 27.043 -8.329 1 47.65 ? C10 1CY 201 A 1 HETATM 11 C C11 1CY . . . B 2 -18.116 26.122 -5.656 1 44.96 ? C11 1CY 201 A 1 HETATM 12 C C12 1CY . . . B 2 -18.086 27.474 -5.352 1 46.65 ? C12 1CY 201 A 1 HETATM 13 C C13 1CY . . . B 2 -17.063 28.002 -4.584 1 43.52 ? C13 1CY 201 A 1 HETATM 14 C C14 1CY . . . B 2 -16.083 27.16 -4.114 1 48.55 ? C14 1CY 201 A 1 HETATM 15 C C15 1CY . . . B 2 -16.105 25.81 -4.375 1 48.39 ? C15 1CY 201 A 1 HETATM 16 C C16 1CY . . . B 2 -17.126 25.295 -5.152 1 48.84 ? C16 1CY 201 A 1 HETATM 17 CL CL17 1CY . . . B 2 -14.8 27.816 -3.148 1 58.94 ? CL17 1CY 201 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 17 #