data_9DI6 # _model_server_result.job_id WBvWi6Oy0M_Devwwgh2mnA _model_server_result.datetime_utc '2025-01-08 10:01:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9di6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 9DI6 # _exptl.entry_id 9DI6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 327.302 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ethyl 1,4-dimethyl-5-{[6-(trifluoromethyl)pyridin-3-yl]methyl}-1H-pyrazole-3-carboxylate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9DI6 _cell.length_a 73.768 _cell.length_b 73.768 _cell.length_c 328.285 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9DI6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H16 F3 N3 O2' _chem_comp.formula_weight 327.302 _chem_comp.id A1A51 _chem_comp.mon_nstd_flag . _chem_comp.name 'ethyl 1,4-dimethyl-5-{[6-(trifluoromethyl)pyridin-3-yl]methyl}-1H-pyrazole-3-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C04 C03 A1A51 sing 1 n n C04 C05 A1A51 sing 2 n n C03 N15 A1A51 sing 3 n y C03 C02 A1A51 doub 4 n y C16 N15 A1A51 sing 5 n n C01 C02 A1A51 sing 6 n n N15 N17 A1A51 sing 7 n y C14 C05 A1A51 doub 8 n y C14 N13 A1A51 sing 9 n y C02 C18 A1A51 sing 10 n y N17 C18 A1A51 doub 11 n y C05 C06 A1A51 sing 12 n y C18 C19 A1A51 sing 13 n n C21 O20 A1A51 sing 14 n n C21 C22 A1A51 sing 15 n n C19 O20 A1A51 sing 16 n n C19 O23 A1A51 doub 17 n n N13 C08 A1A51 doub 18 n y C06 C07 A1A51 doub 19 n y C08 C07 A1A51 sing 20 n y C08 C09 A1A51 sing 21 n n F12 C09 A1A51 sing 22 n n F11 C09 A1A51 sing 23 n n C09 F10 A1A51 sing 24 n n C16 H161 A1A51 sing 25 n n C16 H163 A1A51 sing 26 n n C16 H162 A1A51 sing 27 n n C21 H211 A1A51 sing 28 n n C21 H212 A1A51 sing 29 n n C01 H011 A1A51 sing 30 n n C01 H013 A1A51 sing 31 n n C01 H012 A1A51 sing 32 n n C04 H042 A1A51 sing 33 n n C04 H041 A1A51 sing 34 n n C06 H061 A1A51 sing 35 n n C07 H071 A1A51 sing 36 n n C14 H141 A1A51 sing 37 n n C22 H221 A1A51 sing 38 n n C22 H222 A1A51 sing 39 n n C22 H223 A1A51 sing 40 n n # _atom_sites.entry_id 9DI6 _atom_sites.fract_transf_matrix[1][1] 0.013556 _atom_sites.fract_transf_matrix[1][2] 0.007827 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015653 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003046 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1A51 A 1 1001 1001 A1A51 679 . C 3 FMN A 1 1002 1002 FMN FMN . D 4 OG6 A 1 1003 1003 OG6 ORO . E 5 CIT A 1 1004 1004 CIT CIT . F 6 LDA A 1 1005 2001 LDA LDA . G 7 HOH A 1 1101 16 HOH HOH . G 7 HOH A 2 1102 7 HOH HOH . G 7 HOH A 3 1103 32 HOH HOH . G 7 HOH A 4 1104 14 HOH HOH . G 7 HOH A 5 1105 27 HOH HOH . G 7 HOH A 6 1106 8 HOH HOH . G 7 HOH A 7 1107 23 HOH HOH . G 7 HOH A 8 1108 9 HOH HOH . G 7 HOH A 9 1109 5 HOH HOH . G 7 HOH A 10 1110 28 HOH HOH . G 7 HOH A 11 1111 11 HOH HOH . G 7 HOH A 12 1112 36 HOH HOH . G 7 HOH A 13 1113 3 HOH HOH . G 7 HOH A 14 1114 17 HOH HOH . G 7 HOH A 15 1115 13 HOH HOH . G 7 HOH A 16 1116 1 HOH HOH . G 7 HOH A 17 1117 15 HOH HOH . G 7 HOH A 18 1118 19 HOH HOH . G 7 HOH A 19 1119 10 HOH HOH . G 7 HOH A 20 1120 4 HOH HOH . G 7 HOH A 21 1121 25 HOH HOH . G 7 HOH A 22 1122 24 HOH HOH . G 7 HOH A 23 1123 6 HOH HOH . G 7 HOH A 24 1124 21 HOH HOH . G 7 HOH A 25 1125 2 HOH HOH . G 7 HOH A 26 1126 22 HOH HOH . G 7 HOH A 27 1127 12 HOH HOH . G 7 HOH A 28 1128 18 HOH HOH . G 7 HOH A 29 1129 35 HOH HOH . G 7 HOH A 30 1130 29 HOH HOH . G 7 HOH A 31 1131 20 HOH HOH . G 7 HOH A 32 1132 30 HOH HOH . G 7 HOH A 33 1133 33 HOH HOH . G 7 HOH A 34 1134 31 HOH HOH . G 7 HOH A 35 1135 34 HOH HOH . G 7 HOH A 36 1136 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N15 A1A51 . . . B 2 3.102 37.884 -6.105 1 32.31 ? N15 A1A51 1001 A 1 HETATM 2 C C16 A1A51 . . . B 2 3.496 39.271 -6.284 1 32.34 ? C16 A1A51 1001 A 1 HETATM 3 C C18 A1A51 . . . B 2 3.246 35.752 -5.665 1 29.08 ? C18 A1A51 1001 A 1 HETATM 4 C C19 A1A51 . . . B 2 3.818 34.392 -5.269 1 37.56 ? C19 A1A51 1001 A 1 HETATM 5 C C21 A1A51 . . . B 2 3.656 32.073 -5.646 1 33.47 ? C21 A1A51 1001 A 1 HETATM 6 C C01 A1A51 . . . B 2 0.76 35.092 -6.109 1 29.28 ? C01 A1A51 1001 A 1 HETATM 7 C C02 A1A51 . . . B 2 1.938 36.062 -6.022 1 28.71 ? C02 A1A51 1001 A 1 HETATM 8 C C03 A1A51 . . . B 2 1.895 37.411 -6.286 1 35.06 ? C03 A1A51 1001 A 1 HETATM 9 C C04 A1A51 . . . B 2 0.67 38.204 -6.742 1 25.66 ? C04 A1A51 1001 A 1 HETATM 10 C C05 A1A51 . . . B 2 0.141 39.181 -5.692 1 26.86 ? C05 A1A51 1001 A 1 HETATM 11 C C06 A1A51 . . . B 2 -0.136 38.786 -4.388 1 32.29 ? C06 A1A51 1001 A 1 HETATM 12 C C07 A1A51 . . . B 2 -0.629 39.742 -3.506 1 30.46 ? C07 A1A51 1001 A 1 HETATM 13 C C08 A1A51 . . . B 2 -0.828 41.038 -3.956 1 39.33 ? C08 A1A51 1001 A 1 HETATM 14 C C09 A1A51 . . . B 2 -1.37 42.109 -3.011 1 40.02 ? C09 A1A51 1001 A 1 HETATM 15 C C14 A1A51 . . . B 2 -0.095 40.494 -6.062 1 31.28 ? C14 A1A51 1001 A 1 HETATM 16 C C22 A1A51 . . . B 2 2.84 30.884 -5.144 1 47.17 ? C22 A1A51 1001 A 1 HETATM 17 F F10 A1A51 . . . B 2 -1.1 41.776 -1.717 1 52.02 ? F10 A1A51 1001 A 1 HETATM 18 F F11 A1A51 . . . B 2 -2.721 42.215 -3.171 1 49.46 ? F11 A1A51 1001 A 1 HETATM 19 F F12 A1A51 . . . B 2 -0.78 43.302 -3.311 1 47.81 ? F12 A1A51 1001 A 1 HETATM 20 N N13 A1A51 . . . B 2 -0.562 41.377 -5.202 1 36.11 ? N13 A1A51 1001 A 1 HETATM 21 N N17 A1A51 . . . B 2 3.948 36.885 -5.716 1 39.56 ? N17 A1A51 1001 A 1 HETATM 22 O O20 A1A51 . . . B 2 3.005 33.252 -5.257 1 29.88 ? O20 A1A51 1001 A 1 HETATM 23 O O23 A1A51 . . . B 2 4.969 34.313 -4.986 1 36.93 ? O23 A1A51 1001 A 1 HETATM 24 H H161 A1A51 . . . B 2 3.104 39.616 -7.101 1 38.87 ? H161 A1A51 1001 A 1 HETATM 25 H H163 A1A51 . . . B 2 4.463 39.327 -6.34 1 38.87 ? H163 A1A51 1001 A 1 HETATM 26 H H162 A1A51 . . . B 2 3.185 39.795 -5.529 1 38.87 ? H162 A1A51 1001 A 1 HETATM 27 H H211 A1A51 . . . B 2 4.544 32.047 -5.259 1 40.23 ? H211 A1A51 1001 A 1 HETATM 28 H H212 A1A51 . . . B 2 3.72 32.039 -6.614 1 40.23 ? H212 A1A51 1001 A 1 HETATM 29 H H011 A1A51 . . . B 2 0.15 35.387 -6.803 1 35.2 ? H011 A1A51 1001 A 1 HETATM 30 H H013 A1A51 . . . B 2 0.296 35.07 -5.258 1 35.2 ? H013 A1A51 1001 A 1 HETATM 31 H H012 A1A51 . . . B 2 1.088 34.204 -6.322 1 35.2 ? H012 A1A51 1001 A 1 HETATM 32 H H042 A1A51 . . . B 2 -0.037 37.577 -6.959 1 30.86 ? H042 A1A51 1001 A 1 HETATM 33 H H041 A1A51 . . . B 2 0.909 38.708 -7.535 1 30.86 ? H041 A1A51 1001 A 1 HETATM 34 H H061 A1A51 . . . B 2 0.004 37.909 -4.114 1 38.81 ? H061 A1A51 1001 A 1 HETATM 35 H H071 A1A51 . . . B 2 -0.823 39.514 -2.625 1 36.62 ? H071 A1A51 1001 A 1 HETATM 36 H H141 A1A51 . . . B 2 0.08 40.758 -6.936 1 37.6 ? H141 A1A51 1001 A 1 HETATM 37 H H221 A1A51 . . . B 2 2.572 31.042 -4.225 1 56.67 ? H221 A1A51 1001 A 1 HETATM 38 H H222 A1A51 . . . B 2 3.38 30.079 -5.189 1 56.67 ? H222 A1A51 1001 A 1 HETATM 39 H H223 A1A51 . . . B 2 2.051 30.776 -5.697 1 56.67 ? H223 A1A51 1001 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 39 #