data_9DKO # _model_server_result.job_id z-4lUXbC1xrh0jaFPTV4jw _model_server_result.datetime_utc '2025-02-01 16:55:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9dko # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 9DKO # _exptl.entry_id 9DKO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 361.361 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-cyclopropyl-2,4-dimethyl-3-{[4-(trifluoromethyl)phenyl]methyl}-2,6-dihydro-7H-pyrazolo[3,4-c]pyridin-7-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9DKO _cell.length_a 85.203 _cell.length_b 85.203 _cell.length_c 140.127 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9DKO _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall 'P 64' _symmetry.space_group_name_H-M 'P 64' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H18 F3 N3 O' _chem_comp.formula_weight 361.361 _chem_comp.id A1A5P _chem_comp.mon_nstd_flag . _chem_comp.name 6-cyclopropyl-2,4-dimethyl-3-{[4-(trifluoromethyl)phenyl]methyl}-2,6-dihydro-7H-pyrazolo[3,4-c]pyridin-7-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C24 C23 A1A5P sing 1 n n C20 C21 A1A5P sing 2 n n C20 C19 A1A5P sing 3 n n C21 C19 A1A5P sing 4 n n C22 C23 A1A5P doub 5 n n C22 N18 A1A5P sing 6 n n C23 C15 A1A5P sing 7 n n C19 N18 A1A5P sing 8 n n N18 C17 A1A5P sing 9 n n C04 C03 A1A5P sing 10 n n C04 C05 A1A5P sing 11 n n C15 C03 A1A5P doub 12 n y C15 C16 A1A5P sing 13 n y C03 N02 A1A5P sing 14 n y C17 C16 A1A5P sing 15 n n C17 O25 A1A5P doub 16 n n C16 N26 A1A5P doub 17 n y C05 C06 A1A5P doub 18 n y C05 C14 A1A5P sing 19 n y C06 C07 A1A5P sing 20 n y N02 N26 A1A5P sing 21 n y N02 C01 A1A5P sing 22 n n C14 C13 A1A5P doub 23 n y C07 C08 A1A5P doub 24 n y C13 C08 A1A5P sing 25 n y C08 C09 A1A5P sing 26 n n F12 C09 A1A5P sing 27 n n C09 F11 A1A5P sing 28 n n C09 F10 A1A5P sing 29 n n C01 H013 A1A5P sing 30 n n C01 H011 A1A5P sing 31 n n C01 H012 A1A5P sing 32 n n C04 H041 A1A5P sing 33 n n C04 H042 A1A5P sing 34 n n C06 H061 A1A5P sing 35 n n C07 H071 A1A5P sing 36 n n C13 H131 A1A5P sing 37 n n C14 H141 A1A5P sing 38 n n C19 H191 A1A5P sing 39 n n C20 H202 A1A5P sing 40 n n C20 H201 A1A5P sing 41 n n C21 H212 A1A5P sing 42 n n C21 H211 A1A5P sing 43 n n C22 H221 A1A5P sing 44 n n C24 H241 A1A5P sing 45 n n C24 H243 A1A5P sing 46 n n C24 H242 A1A5P sing 47 n n # _atom_sites.entry_id 9DKO _atom_sites.fract_transf_matrix[1][1] 0.011737 _atom_sites.fract_transf_matrix[1][2] 0.006776 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013552 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007136 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1A5P A 1 1001 1001 A1A5P 010 . C 3 FMN A 1 1002 1002 FMN FMN . D 4 OG6 A 1 1003 1003 OG6 ORO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 A1A5P . . . B 2 28.722 -13.79 18.225 1 67.49 ? C01 A1A5P 1001 A 1 HETATM 2 C C03 A1A5P . . . B 2 27.705 -12.551 16.325 1 57.56 ? C03 A1A5P 1001 A 1 HETATM 3 C C04 A1A5P . . . B 2 29.036 -12.025 15.728 1 43.16 ? C04 A1A5P 1001 A 1 HETATM 4 C C05 A1A5P . . . B 2 29.741 -11.03 16.685 1 45.76 ? C05 A1A5P 1001 A 1 HETATM 5 C C06 A1A5P . . . B 2 31.135 -11.021 16.749 1 60.66 ? C06 A1A5P 1001 A 1 HETATM 6 C C07 A1A5P . . . B 2 31.787 -10.127 17.596 1 61.58 ? C07 A1A5P 1001 A 1 HETATM 7 C C08 A1A5P . . . B 2 31.041 -9.244 18.373 1 44.28 ? C08 A1A5P 1001 A 1 HETATM 8 C C09 A1A5P . . . B 2 31.764 -8.262 19.304 1 67.04 ? C09 A1A5P 1001 A 1 HETATM 9 C C13 A1A5P . . . B 2 29.647 -9.245 18.309 1 51.36 ? C13 A1A5P 1001 A 1 HETATM 10 C C14 A1A5P . . . B 2 28.992 -10.14 17.462 1 56.89 ? C14 A1A5P 1001 A 1 HETATM 11 C C15 A1A5P . . . B 2 26.398 -12.329 15.829 1 59.21 ? C15 A1A5P 1001 A 1 HETATM 12 C C16 A1A5P . . . B 2 25.516 -13.001 16.678 1 58.83 ? C16 A1A5P 1001 A 1 HETATM 13 C C17 A1A5P . . . B 2 23.972 -12.959 16.415 1 49.4 ? C17 A1A5P 1001 A 1 HETATM 14 C C19 A1A5P . . . B 2 22.002 -12.166 15.011 1 45.39 ? C19 A1A5P 1001 A 1 HETATM 15 C C20 A1A5P . . . B 2 21.081 -11.638 13.905 1 64.46 ? C20 A1A5P 1001 A 1 HETATM 16 C C21 A1A5P . . . B 2 21.353 -13.138 14.023 1 33.04 ? C21 A1A5P 1001 A 1 HETATM 17 C C22 A1A5P . . . B 2 24.345 -11.505 14.385 1 58.47 ? C22 A1A5P 1001 A 1 HETATM 18 C C23 A1A5P . . . B 2 25.835 -11.543 14.632 1 53.41 ? C23 A1A5P 1001 A 1 HETATM 19 C C24 A1A5P . . . B 2 26.76 -10.781 13.663 1 52.52 ? C24 A1A5P 1001 A 1 HETATM 20 F F10 A1A5P . . . B 2 31.259 -8.381 20.57 1 86.01 ? F10 A1A5P 1001 A 1 HETATM 21 F F11 A1A5P . . . B 2 33.103 -8.542 19.309 1 87.3 ? F11 A1A5P 1001 A 1 HETATM 22 F F12 A1A5P . . . B 2 31.557 -6.995 18.839 1 46.89 ? F12 A1A5P 1001 A 1 HETATM 23 N N02 A1A5P . . . B 2 27.597 -13.323 17.409 1 62.18 ? N02 A1A5P 1001 A 1 HETATM 24 N N18 A1A5P . . . B 2 23.441 -12.207 15.273 1 42.39 ? N18 A1A5P 1001 A 1 HETATM 25 N N26 A1A5P . . . B 2 26.26 -13.617 17.652 1 50.91 ? N26 A1A5P 1001 A 1 HETATM 26 O O25 A1A5P . . . B 2 23.229 -13.533 17.139 1 50.58 ? O25 A1A5P 1001 A 1 HETATM 27 H H013 A1A5P . . . B 2 29.207 -13.026 18.574 1 81.17 ? H013 A1A5P 1001 A 1 HETATM 28 H H011 A1A5P . . . B 2 28.387 -14.324 18.962 1 81.17 ? H011 A1A5P 1001 A 1 HETATM 29 H H012 A1A5P . . . B 2 29.316 -14.328 17.679 1 81.17 ? H012 A1A5P 1001 A 1 HETATM 30 H H041 A1A5P . . . B 2 28.848 -11.575 14.889 1 51.98 ? H041 A1A5P 1001 A 1 HETATM 31 H H042 A1A5P . . . B 2 29.627 -12.777 15.566 1 51.98 ? H042 A1A5P 1001 A 1 HETATM 32 H H061 A1A5P . . . B 2 31.628 -11.611 16.226 1 72.98 ? H061 A1A5P 1001 A 1 HETATM 33 H H071 A1A5P . . . B 2 32.716 -10.12 17.643 1 74.09 ? H071 A1A5P 1001 A 1 HETATM 34 H H131 A1A5P . . . B 2 29.156 -8.651 18.83 1 61.81 ? H131 A1A5P 1001 A 1 HETATM 35 H H141 A1A5P . . . B 2 28.063 -10.145 17.414 1 68.45 ? H141 A1A5P 1001 A 1 HETATM 36 H H191 A1A5P . . . B 2 21.515 -12.2 15.849 1 54.65 ? H191 A1A5P 1001 A 1 HETATM 37 H H202 A1A5P . . . B 2 20.202 -11.348 14.195 1 77.54 ? H202 A1A5P 1001 A 1 HETATM 38 H H201 A1A5P . . . B 2 21.526 -11.188 13.169 1 77.54 ? H201 A1A5P 1001 A 1 HETATM 39 H H212 A1A5P . . . B 2 21.946 -13.51 13.351 1 39.84 ? H212 A1A5P 1001 A 1 HETATM 40 H H211 A1A5P . . . B 2 20.623 -13.669 14.376 1 39.84 ? H211 A1A5P 1001 A 1 HETATM 41 H H221 A1A5P . . . B 2 24.007 -11.03 13.66 1 70.35 ? H221 A1A5P 1001 A 1 HETATM 42 H H241 A1A5P . . . B 2 26.227 -10.211 13.088 1 63.21 ? H241 A1A5P 1001 A 1 HETATM 43 H H243 A1A5P . . . B 2 27.254 -11.416 13.121 1 63.21 ? H243 A1A5P 1001 A 1 HETATM 44 H H242 A1A5P . . . B 2 27.382 -10.237 14.171 1 63.21 ? H242 A1A5P 1001 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 370 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 44 #