data_9DPP
#
_model_server_result.job_id            Yu3yoxsWmEUqPDn0OzMDsA 
_model_server_result.datetime_utc      '2025-03-26 17:53:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9dpp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":509}' 
#
_entry.id    9DPP 
#
_exptl.entry_id    9DPP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              35.453 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHLORIDE ION' 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            9DPP 
_cell.length_a            70.94 
_cell.length_b            70.94 
_cell.length_c            145.86 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9DPP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        98 
_symmetry.space_group_name_Hall    'I 4bw 2bw' 
_symmetry.space_group_name_H-M     'I 41 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 1 1 
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_454 -x-1/2,y,-z-1/4 -1 0 0 0 1 0 0 0 -1 -35.47 0 -36.465 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 8 A CYS 327 1_555 A SG CYS 74 A CYS 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
disulf ? disulf2 A SG CYS 37 A CYS 356 1_555 A SG CYS 107 A CYS 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
disulf ? disulf3 A SG CYS 41 A CYS 360 1_555 A SG CYS 109 A CYS 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
disulf ? disulf4 A SG CYS 73 A CYS 392 1_555 A SG CYS 73 A CYS 392 5_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
metalc ? metalc1 A OG1 THR 67 A THR 386 1_555 P NA NA . A NA 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? 
metalc ? metalc2 A O PRO 76 A PRO 395 1_555 M NA NA . A NA 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.916 ? 
metalc ? metalc3 M NA NA . A NA 512 1_555 R O HOH . A HOH 607 5_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.956 ? 
metalc ? metalc4 O NA NA . A NA 514 1_555 R O HOH . A HOH 616 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? 
metalc ? metalc5 O NA NA . A NA 514 1_555 R O HOH . A HOH 623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.947 ? 
#
_chem_comp.formula           'Cl -1' 
_chem_comp.formula_weight    35.453 
_chem_comp.id                CL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHLORIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     9DPP 
_atom_sites.fract_transf_matrix[1][1]    0.014096 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014096 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006856 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 501 1 GOL GOL . 
C 2 GOL A 1 502 2 GOL GOL . 
D 3 CL A 1 503 1 CL CL . 
E 3 CL A 1 504 2 CL CL . 
F 3 CL A 1 505 3 CL CL . 
G 3 CL A 1 506 4 CL CL . 
H 3 CL A 1 507 5 CL CL . 
I 3 CL A 1 508 6 CL CL . 
J 3 CL A 1 509 8 CL CL . 
K 3 CL A 1 510 9 CL CL . 
L 3 CL A 1 511 10 CL CL . 
M 4 NA A 1 512 1 NA NA . 
N 4 NA A 1 513 2 NA NA . 
O 4 NA A 1 514 4 NA NA . 
P 4 NA A 1 515 5 NA NA . 
Q 4 NA A 1 516 6 NA NA . 
R 5 HOH A 1 601 42 HOH HOH . 
R 5 HOH A 2 602 18 HOH HOH . 
R 5 HOH A 3 603 15 HOH HOH . 
R 5 HOH A 4 604 75 HOH HOH . 
R 5 HOH A 5 605 13 HOH HOH . 
R 5 HOH A 6 606 1 HOH HOH . 
R 5 HOH A 7 607 39 HOH HOH . 
R 5 HOH A 8 608 16 HOH HOH . 
R 5 HOH A 9 609 58 HOH HOH . 
R 5 HOH A 10 610 38 HOH HOH . 
R 5 HOH A 11 611 43 HOH HOH . 
R 5 HOH A 12 612 3 HOH HOH . 
R 5 HOH A 13 613 48 HOH HOH . 
R 5 HOH A 14 614 66 HOH HOH . 
R 5 HOH A 15 615 29 HOH HOH . 
R 5 HOH A 16 616 55 HOH HOH . 
R 5 HOH A 17 617 8 HOH HOH . 
R 5 HOH A 18 618 50 HOH HOH . 
R 5 HOH A 19 619 12 HOH HOH . 
R 5 HOH A 20 620 36 HOH HOH . 
R 5 HOH A 21 621 2 HOH HOH . 
R 5 HOH A 22 622 46 HOH HOH . 
R 5 HOH A 23 623 27 HOH HOH . 
R 5 HOH A 24 624 7 HOH HOH . 
R 5 HOH A 25 625 5 HOH HOH . 
R 5 HOH A 26 626 91 HOH HOH . 
R 5 HOH A 27 627 6 HOH HOH . 
R 5 HOH A 28 628 10 HOH HOH . 
R 5 HOH A 29 629 35 HOH HOH . 
R 5 HOH A 30 630 56 HOH HOH . 
R 5 HOH A 31 631 26 HOH HOH . 
R 5 HOH A 32 632 81 HOH HOH . 
R 5 HOH A 33 633 31 HOH HOH . 
R 5 HOH A 34 634 69 HOH HOH . 
R 5 HOH A 35 635 76 HOH HOH . 
R 5 HOH A 36 636 87 HOH HOH . 
R 5 HOH A 37 637 9 HOH HOH . 
R 5 HOH A 38 638 77 HOH HOH . 
R 5 HOH A 39 639 74 HOH HOH . 
R 5 HOH A 40 640 72 HOH HOH . 
R 5 HOH A 41 641 63 HOH HOH . 
R 5 HOH A 42 642 80 HOH HOH . 
R 5 HOH A 43 643 44 HOH HOH . 
R 5 HOH A 44 644 45 HOH HOH . 
R 5 HOH A 45 645 85 HOH HOH . 
R 5 HOH A 46 646 23 HOH HOH . 
R 5 HOH A 47 647 89 HOH HOH . 
R 5 HOH A 48 648 60 HOH HOH . 
R 5 HOH A 49 649 92 HOH HOH . 
R 5 HOH A 50 650 78 HOH HOH . 
R 5 HOH A 51 651 93 HOH HOH . 
R 5 HOH A 52 652 21 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CL 
_atom_site.label_atom_id         CL 
_atom_site.label_comp_id         CL 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -19.612 
_atom_site.Cartn_y               -27.145 
_atom_site.Cartn_z               -7.376 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        96.57 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CL 
_atom_site.auth_comp_id          CL 
_atom_site.auth_seq_id           509 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           230 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#