data_9DQL
#
_model_server_result.job_id            8UtXhlss5XIblc-_jSGy7g 
_model_server_result.datetime_utc      '2025-07-11 01:32:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          9dql 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"FA","auth_seq_id":301}' 
#
_entry.id    9DQL 
#
_exptl.entry_id    9DQL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              384.237 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE 
_entity.pdbx_number_of_molecules    14 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.87 
_cell.angle_gamma         90 
_cell.entry_id            9DQL 
_cell.length_a            122.19 
_cell.length_b            93.88 
_cell.length_c            133.72 
_cell.Z_PDB               28 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 9DQL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    14-meric 
_pdbx_struct_assembly.oligomeric_count      14 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 O N N 
? 2 R N N 
? 2 S N N 
? 2 U N N 
? 2 V N N 
? 2 W N N 
? 2 Y N N 
? 2 AA N N 
? 2 CA N N 
? 2 EA N N 
? 2 FA N N 
? 2 GA N N 
? 2 IA N N 
? 2 JA N N 
#
_chem_comp.formula           'C19 H25 B N4 O4' 
_chem_comp.formula_weight    384.237 
_chem_comp.id                BO2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     BORTEZOMIB 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 BO2 sing 70 n y 
N1 C6 BO2 doub 71 n y 
C2 C3 BO2 doub 72 n y 
C2 C7 BO2 sing 73 n n 
C3 N4 BO2 sing 74 n y 
C3 H3 BO2 sing 75 n n 
N4 C5 BO2 doub 76 n y 
C5 C6 BO2 sing 77 n y 
C5 H5 BO2 sing 78 n n 
C6 H6 BO2 sing 79 n n 
C7 O8 BO2 doub 80 n n 
C7 N9 BO2 sing 81 n n 
N9 C10 BO2 sing 82 n n 
N9 HN9 BO2 sing 83 n n 
C10 C11 BO2 sing 84 n n 
C10 C18 BO2 sing 85 n n 
C10 H10 BO2 sing 86 n n 
C11 C12 BO2 sing 87 n n 
C11 H111 BO2 sing 88 n n 
C11 H112 BO2 sing 89 n n 
C12 C13 BO2 sing 90 n y 
C12 C17 BO2 doub 91 n y 
C13 C14 BO2 doub 92 n y 
C13 H13 BO2 sing 93 n n 
C14 C15 BO2 sing 94 n y 
C14 H14 BO2 sing 95 n n 
C15 C16 BO2 doub 96 n y 
C15 H15 BO2 sing 97 n n 
C16 C17 BO2 sing 98 n y 
C16 H16 BO2 sing 99 n n 
C17 H17 BO2 sing 100 n n 
C18 O19 BO2 doub 101 n n 
C18 N20 BO2 sing 102 n n 
N20 C21 BO2 sing 103 n n 
N20 H20 BO2 sing 104 n n 
C21 C22 BO2 sing 105 n n 
C21 B26 BO2 sing 106 n n 
C21 H21 BO2 sing 107 n n 
C22 C23 BO2 sing 108 n n 
C22 H221 BO2 sing 109 n n 
C22 H222 BO2 sing 110 n n 
C23 C24 BO2 sing 111 n n 
C23 C25 BO2 sing 112 n n 
C23 H23 BO2 sing 113 n n 
C24 H241 BO2 sing 114 n n 
C24 H242 BO2 sing 115 n n 
C24 H243 BO2 sing 116 n n 
C25 H251 BO2 sing 117 n n 
C25 H252 BO2 sing 118 n n 
C25 H253 BO2 sing 119 n n 
B26 O27 BO2 sing 120 n n 
B26 O28 BO2 sing 121 n n 
O27 H27 BO2 sing 122 n n 
O28 H28 BO2 sing 123 n n 
#
_atom_sites.entry_id                     9DQL 
_atom_sites.fract_transf_matrix[1][1]    0.008184 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001131 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010652 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007549 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
O 2 BO2 A 1 301 301 BO2 BO2 . 
P 3 CL A 1 302 2 CL CL . 
Q 3 CL A 1 303 7 CL CL . 
R 2 BO2 B 1 301 301 BO2 BO2 . 
S 2 BO2 C 1 301 301 BO2 BO2 . 
T 3 CL C 1 302 3 CL CL . 
U 2 BO2 D 1 301 301 BO2 BO2 . 
V 2 BO2 E 1 301 301 BO2 BO2 . 
W 2 BO2 F 1 301 301 BO2 BO2 . 
X 3 CL F 1 302 8 CL CL . 
Y 2 BO2 G 1 301 301 BO2 BO2 . 
Z 3 CL G 1 302 9 CL CL . 
AA 2 BO2 H 1 301 301 BO2 BO2 . 
BA 3 CL H 1 302 4 CL CL . 
CA 2 BO2 I 1 301 301 BO2 BO2 . 
DA 3 CL I 1 302 5 CL CL . 
EA 2 BO2 J 1 301 301 BO2 BO2 . 
FA 2 BO2 K 1 301 301 BO2 BO2 . 
GA 2 BO2 L 1 301 301 BO2 BO2 . 
HA 3 CL L 1 302 6 CL CL . 
IA 2 BO2 M 1 301 301 BO2 BO2 . 
JA 2 BO2 N 1 301 301 BO2 BO2 . 
KA 3 CL N 1 302 1 CL CL . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 BO2 . . . FA 2 -87.332 -23.048 -55.804 0.9 156.36 ? N1 BO2 301 K 1 
HETATM 2 C C2 BO2 . . . FA 2 -86.288 -22.902 -56.603 0.9 148.63 ? C2 BO2 301 K 1 
HETATM 3 C C3 BO2 . . . FA 2 -86.486 -22.503 -57.918 0.9 147.47 ? C3 BO2 301 K 1 
HETATM 4 N N4 BO2 . . . FA 2 -87.711 -22.274 -58.366 0.9 144.77 ? N4 BO2 301 K 1 
HETATM 5 C C5 BO2 . . . FA 2 -88.752 -22.423 -57.565 0.9 147.34 ? C5 BO2 301 K 1 
HETATM 6 C C6 BO2 . . . FA 2 -88.557 -22.818 -56.251 0.9 150.27 ? C6 BO2 301 K 1 
HETATM 7 C C7 BO2 . . . FA 2 -84.872 -23.165 -56.081 0.9 133.67 ? C7 BO2 301 K 1 
HETATM 8 O O8 BO2 . . . FA 2 -83.959 -22.571 -56.547 0.9 140.11 ? O8 BO2 301 K 1 
HETATM 9 N N9 BO2 . . . FA 2 -84.629 -24.13 -55.018 0.9 134.31 ? N9 BO2 301 K 1 
HETATM 10 C C10 BO2 . . . FA 2 -83.268 -24.348 -54.543 0.9 148.23 ? C10 BO2 301 K 1 
HETATM 11 C C11 BO2 . . . FA 2 -82.974 -23.48 -53.312 0.9 151.67 ? C11 BO2 301 K 1 
HETATM 12 C C12 BO2 . . . FA 2 -84.252 -22.86 -52.746 0.9 155.99 ? C12 BO2 301 K 1 
HETATM 13 C C13 BO2 . . . FA 2 -84.669 -21.6 -53.153 0.9 153.21 ? C13 BO2 301 K 1 
HETATM 14 C C14 BO2 . . . FA 2 -85.833 -21.053 -52.632 0.9 167.71 ? C14 BO2 301 K 1 
HETATM 15 C C15 BO2 . . . FA 2 -86.577 -21.761 -51.699 0.9 178.61 ? C15 BO2 301 K 1 
HETATM 16 C C16 BO2 . . . FA 2 -86.157 -23.017 -51.29 0.9 176.02 ? C16 BO2 301 K 1 
HETATM 17 C C17 BO2 . . . FA 2 -84.995 -23.564 -51.812 0.9 165.3 ? C17 BO2 301 K 1 
HETATM 18 C C18 BO2 . . . FA 2 -83.012 -25.829 -54.225 0.9 145.93 ? C18 BO2 301 K 1 
HETATM 19 O O19 BO2 . . . FA 2 -83.842 -26.493 -53.7 0.9 141.19 ? O19 BO2 301 K 1 
HETATM 20 N N20 BO2 . . . FA 2 -81.728 -26.414 -54.577 0.9 148.61 ? N20 BO2 301 K 1 
HETATM 21 C C21 BO2 . . . FA 2 -81.41 -27.806 -54.306 0.9 144.7 ? C21 BO2 301 K 1 
HETATM 22 C C22 BO2 . . . FA 2 -80.965 -28.448 -55.623 0.9 143.46 ? C22 BO2 301 K 1 
HETATM 23 C C23 BO2 . . . FA 2 -81.019 -29.971 -55.55 0.9 140.02 ? C23 BO2 301 K 1 
HETATM 24 C C24 BO2 . . . FA 2 -80.961 -30.568 -56.952 0.9 140.08 ? C24 BO2 301 K 1 
HETATM 25 C C25 BO2 . . . FA 2 -82.312 -30.387 -54.864 0.9 138.39 ? C25 BO2 301 K 1 
HETATM 26 B B26 BO2 . . . FA 2 -80.263 -27.838 -53.219 0.9 144.64 ? B26 BO2 301 K 1 
HETATM 27 O O27 BO2 . . . FA 2 -78.95 -26.982 -53.776 0.9 137.75 ? O27 BO2 301 K 1 
HETATM 28 O O28 BO2 . . . FA 2 -80.828 -27.131 -51.82 0.9 150.41 ? O28 BO2 301 K 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           251 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           28 
#