data_9DQM # _model_server_result.job_id xZEbCtFCtVCwAwE-60JZtA _model_server_result.datetime_utc '2024-12-27 00:39:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 9dqm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 9DQM # _exptl.entry_id 9DQM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 9DQM _cell.length_a 90.584 _cell.length_b 90.584 _cell.length_c 376.753 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 9DQM _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 299 n n P O2 PO4 sing 300 n n P O3 PO4 sing 301 n n P O4 PO4 sing 302 n n # _atom_sites.entry_id 9DQM _atom_sites.fract_transf_matrix[1][1] 0.011039 _atom_sites.fract_transf_matrix[1][2] 0.006374 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012747 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002654 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 501 2 PO4 PO4 . D 3 AMP A 1 502 4 AMP AMP . E 2 PO4 B 1 501 1 PO4 PO4 . F 3 AMP B 1 502 5 AMP AMP . G 4 HOH A 1 601 92 HOH HOH . G 4 HOH A 2 602 105 HOH HOH . G 4 HOH A 3 603 67 HOH HOH . G 4 HOH A 4 604 21 HOH HOH . G 4 HOH A 5 605 47 HOH HOH . G 4 HOH A 6 606 87 HOH HOH . G 4 HOH A 7 607 38 HOH HOH . G 4 HOH A 8 608 6 HOH HOH . G 4 HOH A 9 609 46 HOH HOH . G 4 HOH A 10 610 96 HOH HOH . G 4 HOH A 11 611 77 HOH HOH . G 4 HOH A 12 612 69 HOH HOH . G 4 HOH A 13 613 95 HOH HOH . G 4 HOH A 14 614 16 HOH HOH . G 4 HOH A 15 615 76 HOH HOH . G 4 HOH A 16 616 11 HOH HOH . G 4 HOH A 17 617 70 HOH HOH . G 4 HOH A 18 618 52 HOH HOH . G 4 HOH A 19 619 66 HOH HOH . G 4 HOH A 20 620 101 HOH HOH . G 4 HOH A 21 621 10 HOH HOH . G 4 HOH A 22 622 41 HOH HOH . G 4 HOH A 23 623 102 HOH HOH . G 4 HOH A 24 624 35 HOH HOH . G 4 HOH A 25 625 34 HOH HOH . G 4 HOH A 26 626 23 HOH HOH . G 4 HOH A 27 627 18 HOH HOH . G 4 HOH A 28 628 28 HOH HOH . G 4 HOH A 29 629 24 HOH HOH . G 4 HOH A 30 630 91 HOH HOH . G 4 HOH A 31 631 43 HOH HOH . G 4 HOH A 32 632 64 HOH HOH . G 4 HOH A 33 633 53 HOH HOH . G 4 HOH A 34 634 40 HOH HOH . G 4 HOH A 35 635 9 HOH HOH . G 4 HOH A 36 636 30 HOH HOH . G 4 HOH A 37 637 79 HOH HOH . G 4 HOH A 38 638 97 HOH HOH . G 4 HOH A 39 639 86 HOH HOH . G 4 HOH A 40 640 26 HOH HOH . G 4 HOH A 41 641 65 HOH HOH . G 4 HOH A 42 642 45 HOH HOH . G 4 HOH A 43 643 29 HOH HOH . H 4 HOH B 1 601 94 HOH HOH . H 4 HOH B 2 602 75 HOH HOH . H 4 HOH B 3 603 49 HOH HOH . H 4 HOH B 4 604 89 HOH HOH . H 4 HOH B 5 605 88 HOH HOH . H 4 HOH B 6 606 32 HOH HOH . H 4 HOH B 7 607 31 HOH HOH . H 4 HOH B 8 608 81 HOH HOH . H 4 HOH B 9 609 17 HOH HOH . H 4 HOH B 10 610 60 HOH HOH . H 4 HOH B 11 611 83 HOH HOH . H 4 HOH B 12 612 74 HOH HOH . H 4 HOH B 13 613 42 HOH HOH . H 4 HOH B 14 614 61 HOH HOH . H 4 HOH B 15 615 90 HOH HOH . H 4 HOH B 16 616 22 HOH HOH . H 4 HOH B 17 617 85 HOH HOH . H 4 HOH B 18 618 78 HOH HOH . H 4 HOH B 19 619 25 HOH HOH . H 4 HOH B 20 620 14 HOH HOH . H 4 HOH B 21 621 50 HOH HOH . H 4 HOH B 22 622 56 HOH HOH . H 4 HOH B 23 623 72 HOH HOH . H 4 HOH B 24 624 100 HOH HOH . H 4 HOH B 25 625 73 HOH HOH . H 4 HOH B 26 626 44 HOH HOH . H 4 HOH B 27 627 12 HOH HOH . H 4 HOH B 28 628 54 HOH HOH . H 4 HOH B 29 629 59 HOH HOH . H 4 HOH B 30 630 5 HOH HOH . H 4 HOH B 31 631 104 HOH HOH . H 4 HOH B 32 632 8 HOH HOH . H 4 HOH B 33 633 1 HOH HOH . H 4 HOH B 34 634 84 HOH HOH . H 4 HOH B 35 635 98 HOH HOH . H 4 HOH B 36 636 57 HOH HOH . H 4 HOH B 37 637 62 HOH HOH . H 4 HOH B 38 638 13 HOH HOH . H 4 HOH B 39 639 27 HOH HOH . H 4 HOH B 40 640 20 HOH HOH . H 4 HOH B 41 641 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 2 -44.025 51.561 -26.653 1 61.57 ? P PO4 501 A 1 HETATM 2 O O1 PO4 . . . C 2 -42.539 51.853 -26.273 1 71.74 ? O1 PO4 501 A 1 HETATM 3 O O2 PO4 . . . C 2 -44.293 52.2 -28.062 1 61.99 ? O2 PO4 501 A 1 HETATM 4 O O3 PO4 . . . C 2 -44.299 50.022 -26.735 1 57.94 ? O3 PO4 501 A 1 HETATM 5 O O4 PO4 . . . C 2 -44.92 52.185 -25.553 1 59.58 ? O4 PO4 501 A 1 # _model_server_stats.io_time_ms 106 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #